Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00229 ATGTCCTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGATAGCTCCTCTAGAATTGAAAACAAGCGTGGCCATCAATGGTTTATGGATGGCAGTGGACCAGAGTTATTCAGTAGCAAGAAGCAAGCAATAGAAACTGTAAATACTAGAACTGTTCCAGGAGTTCCACACATGAATGTTTCTCCCTGGGAAAACACTTCAAGTTTTCAATCAGTTCCGGGGCCCTTCACTGATCGCCTCTTTGGCTCCGAGCCAATACGAACAGTCAATTTGGTTGATAGAAGTATCACTGTTGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTTGAGAATCATTTTGCAAACAACCCGTCAGTTGGCTTGTCCATGTCACAATCCATCGAGGATCCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAGGTTAAAGTCAATCAAGTCAGGGACGCTGACATTGGCATGTCTGCCTCTTTGGGACATGCCTATAGCAGCAGGGGTGATGGTACAGTTTCAATGGGTACAGCATTTAAGAAAATTCATGAGAACGCCATATCATTGGGCCAATCTTATAATAGTAGAGATGAGAATAGCATCTCGGTTGGCCCTGCATATCACAAGACAGATGATAGTTTTATTTCAATGGGTCATGCTTTCAGCAAGGGTGATGGAAATTTTATTACAAATGGTCATAACTATAGCAAGGGAGACAATAGCATCCTATCGATGAGTCAGCCTTTTGACAAGGGGGATTACTCTTTTATTTCAATGGGTCAGTCTTATGAGAAGGCAGAAGGCAATATCATTTCTTTTGGTGCCTCCTACAATAAAGGGCATGAAAATTTTATCTCAATGGGGCCAGCCTATAGTAAGGCAGGTGATACTTTCATTTCAATGGCTTCCCCTTATAATAAGGGAAATGATGATATATCAATGGGTCCAACCTATGACAAGGTGAACTCTGATATTGTACATGTGGGTCCCAAATATGACAAAGCAGATTCTGGTGCTGTGTCTATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGGTTTGATGATGAGAATGCGGCGGATAATCCATCTGGTGGGATTATTAGCAGTTACGACTTGTTGATGGCTAATCAGGCTTCTGCCCAAGCATCAGAAGTGTCAAACCTGAGAGATTCAGTTGATCCTCATGCGGAAGTAAACTTTAATAATGCTACAAAAGTTGATGTTAAGATTGACACAAGTTCCAAGAATAAAGAGCCTAGGACGACTAAGAAGGTGCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATATTTGTGCAGCTGTGACAACTGCAATCATTCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCATGCTGGCTGCAAAACCAAACATCCAAACAATCACATCTATTTTGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCTCAGGAGTTGTTATTTGATGCAATTCAGAATGTGACTGGTTCTCCCATTAATCAGAAGAATTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAACTATTCCTTCTTGA 1752 40.92 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRIENKRGHQWFMDGSGPELFSSKKQAIETVNTRTVPGVPHMNVSPWENTSSFQSVPGPFTDRLFGSEPIRTVNLVDRSITVGNANMDMGRKEFENHFANNPSVGLSMSQSIEDPSSCLNFGGIRKVKVNQVRDADIGMSASLGHAYSSRGDGTVSMGTAFKKIHENAISLGQSYNSRDENSISVGPAYHKTDDSFISMGHAFSKGDGNFITNGHNYSKGDNSILSMSQPFDKGDYSFISMGQSYEKAEGNIISFGASYNKGHENFISMGPAYSKAGDTFISMASPYNKGNDDISMGPTYDKVNSDIVHVGPKYDKADSGAVSMAHNYHKGESNTISFGGFDDENAADNPSGGIISSYDLLMANQASAQASEVSNLRDSVDPHAEVNFNNATKVDVKIDTSSKNKEPRTTKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQELLFDAIQNVTGSPINQKNFRIWKASYQAATLELQRIYGKDEVTIPS 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1146103 1154005 - CmoCh04G002290.1 Cmo04g00229 379204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00229 583 MobiDBLite consensus disorder prediction 425 446 - -
Cmo04g00229 583 Pfam Tify domain binding domain 476 531 IPR032308 -
Cmo04g00229 583 PANTHER AUTOIMMUNE REGULATOR 1 583 - -
Cmo04g00229 583 PANTHER N-LYSINE METHYLTRANSFERASE 1 583 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01272 Cmo04g00229 ECH
Cmo04g00229 Cmo04g01272 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00229 Cmo-Chr4:1146103 Cmo02g01406 Cmo-Chr2:8343868 3.03E-17 dispersed
Cmo14g00154 Cmo-Chr14:674389 Cmo04g00229 Cmo-Chr4:1146103 5.05E-44 wgd
Cmo02g00831 Cmo-Chr2:5051530 Cmo04g00229 Cmo-Chr4:1146103 8.58E-67 wgd
Cmo20g00463 Cmo-Chr20:2147031 Cmo04g00229 Cmo-Chr4:1146103 7.00E-43 wgd
Cmo04g00229 Cmo-Chr4:1146103 Cmo04g01272 Cmo-Chr4:6453158 0 wgd
Cmo04g00229 Cmo-Chr4:1146103 Cmo06g00314 Cmo-Chr6:1533434 1.72E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00229 - - cmax:111472013 1188.33