Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00242 ATGAATATGGAAAATTTCGGATCATATTCGAAACCCCATGAATCAATCAATGTCAGAAGACTCGGAAAAAAGGCTTTGAAATGTCTCGAGAAAATGGCCATTGAAGTTGCTGTCAAGGCTGCCGTTGGTGCACTCAATGTCATCGGAGACTGTCCTTTCACTCAGAGGGTTCTCTTAACTTTGGAGGAGAAGAAAGTTCCTTACATATTGCATCTCATCAATTTATCCGATAAACCCTGTTGGTTCTTGGGAGCTAGCCCAGAAGGGAAGGTGCCGGTGGCGAAGATTGATCGTCAATGGGTTCCTGATTCTGATGTCATTGTGAGGATTCTTGAGGACAAGTTTCCAAACCCTTCTCTTCTTACTCCCCCTCAATTTTCTTCTGTAGGATCAAAAATAGGCCCTGCTTTTGGGAAATTCTTGAGGAGCAAGGACCCGAATGATTGTTCAGAGCAGGCTTTGCTTAGAGAGCTGAAGGCATTGGACAAGCATCTCATGGCTTATGGTCCTTATGTCGCTGGAGCGAAGGTAAGTGCTGTTGATTTGAGTCTGGCACCGAAGTTGTACCATCTTGATATTGCTCTTGCCCATTTCAAGAACTTTCATGTCCCCCAAAACTTAGCCTGTTTATCTGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGCCCCGGAACATGTAATTCTGGGTTGGGAGGCCAAGGTGAATGCTGCATGA 735 45.03 MNMENFGSYSKPHESINVRRLGKKALKCLEKMAIEVAVKAAVGALNVIGDCPFTQRVLLTLEEKKVPYILHLINLSDKPCWFLGASPEGKVPVAKIDRQWVPDSDVIVRILEDKFPNPSLLTPPQFSSVGSKIGPAFGKFLRSKDPNDCSEQALLRELKALDKHLMAYGPYVAGAKVSAVDLSLAPKLYHLDIALAHFKNFHVPQNLACLSAYKKLLFARESFVKTKAAPEHVILGWEAKVNAA 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1210152 1211710 - CmoCh04G002420.1 Cmo04g00242 379217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00242 244 SUPERFAMILY Thioredoxin-like 47 118 IPR036249 -
Cmo04g00242 244 CDD GST_N_family 51 112 - -
Cmo04g00242 244 Gene3D Glutaredoxin 32 120 - -
Cmo04g00242 244 SUPERFAMILY GST C-terminal domain-like 126 240 IPR036282 -
Cmo04g00242 244 Pfam Glutathione S-transferase, C-terminal domain 151 202 - -
Cmo04g00242 244 Gene3D - 121 243 - -
Cmo04g00242 244 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 28 241 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cmo04g00242 244 SFLD Glutathione Transferase (cytosolic) 51 200 IPR040079 -
Cmo04g00242 244 PANTHER DEHYDROASCORBATE REDUCTASE 28 241 - -
Cmo04g00242 244 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 41 119 IPR004045 -
Cmo04g00242 244 Pfam Glutathione S-transferase, N-terminal domain 50 118 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00242 Cmo-Chr4:1210152 Cmo14g00834 Cmo-Chr14:4326528 1.84E-86 dispersed
Cmo04g00242 Cmo-Chr4:1210152 Cmo04g00243 Cmo-Chr4:1212288 4.95E-106 tandem
Cmo04g00242 Cmo-Chr4:1210152 Cmo04g01285 Cmo-Chr4:6518889 1.75E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00242 K21888 - cmax:111483829 339.347