Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00243 | ATGGCCATTGAAGTTGCTGTCAAGGCTGCCGTTGGTGCACCCAATGTTATTGGAGACTGTCCTTTCTCTCAGAGGGTTCTCTTAACTTTAGAGGAGAAGAAAGTTCCTTACAAACTGCATCTCATCAATTTATCCGATAAACCCATTTGGTTTCTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTGGTGAAGTTTGATGACAAATGGGTATCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTACCCTGAGCCTTCTCTTGTTACTCCCCCTGAATTTTCTTCTGTGGGATCAAAGACAAATGGTGCTTTCGTGAAAATGTTGAAGAGCAAGGACCCGAATGATGGTTCGGAGCTGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTCACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACAATCTCGATATTGCTCTTGGCCATTTCAAGAAGTGGATATTCCCTGTAAACTTGAACAGTTTATCCAAATACAAAGAGCTGCTTTTCGCTCGAGAATCTTTCATGAAGACAAAGGCTGCCCCAGAACACGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCTGCAGAACCTGTAATTTCTGATAGTGAGCCCAAGGTGAATGCTGCCGCAGAACCTGTAATTTCAGATAGTGAGCCCAAGGCGAATGCTGTCGCAGAACATGTAGTTTCTGATAGTGAGCCCAAGGCCATTGAGGTTGCTGTCAAGGCTGCTGTTGGTGCACTCGATGTTATTGGAGATTGCCCTTTCGCTCAGAGGGTTCTTTTGACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCGATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCGGTGGCCAAGATTGACGACAAATGGGTTCCCGACTCCGATGTCATTGTCGGGATTCTTGAGGAGAAGTATCCCGAGCCTTTTCTTGCGACTCCACCTGAATTTTCTTCTGTGGGATCAAAGATAAGTGGTGCTTTTGTAAAATTCTTGAAGAGTAAGGACCCGAACGATGGTTCGGAGCAGGCTTTGCTTGAAGAATTGAAGGCGTTGAACGAGCATCTCAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTTACCGCCGTTGATTTGAGTCTGGCACCGAAGCTTTACCATCTTGATGTCGCACTTGGCCATTTCAAGAAGTGGATTTTCCCTGAAAACTTAACCAGTTTATCCAAATACAAAGAGTTGCTTTTCGCTCGAGAATCGTTTGTGAAGACGAAGGCTGCCCCAGAACATGTAATTTCTGGTTGGGAGGCCAAAGTGAATGCTGCATGA | 1401 | 46.04 | MAIEVAVKAAVGAPNVIGDCPFSQRVLLTLEEKKVPYKLHLINLSDKPIWFLEVSPEGKVPVVKFDDKWVSDSDVIVGILEEKYPEPSLVTPPEFSSVGSKTNGAFVKMLKSKDPNDGSELALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYNLDIALGHFKKWIFPVNLNSLSKYKELLFARESFMKTKAAPEHVISGWEPKVNAAAEPVISDSEPKVNAAAEPVISDSEPKANAVAEHVVSDSEPKAIEVAVKAAVGALDVIGDCPFAQRVLLTLEEKKVPYKWHLIDLSDKPSWFLEVSPEGKVPVAKIDDKWVPDSDVIVGILEEKYPEPFLATPPEFSSVGSKISGAFVKFLKSKDPNDGSEQALLEELKALNEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDVALGHFKKWIFPENLTSLSKYKELLFARESFVKTKAAPEHVISGWEAKVNAA | 466 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1212288 | 1215875 | - | CmoCh04G002430.1 | Cmo04g00243 | 379218 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00243 | 466 | Pfam | Glutathione S-transferase, C-terminal domain | 123 | 167 | - | - | |
Cmo04g00243 | 466 | Pfam | Glutathione S-transferase, C-terminal domain | 371 | 424 | - | - | |
Cmo04g00243 | 466 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
Cmo04g00243 | 466 | SUPERFAMILY | Thioredoxin-like | 19 | 87 | IPR036249 | - | |
Cmo04g00243 | 466 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 66 | 212 | IPR010987 | - | |
Cmo04g00243 | 466 | SFLD | Main (cytGST) | 272 | 434 | - | - | |
Cmo04g00243 | 466 | SUPERFAMILY | GST C-terminal domain-like | 103 | 210 | IPR036282 | - | |
Cmo04g00243 | 466 | SUPERFAMILY | Thioredoxin-like | 270 | 340 | IPR036249 | - | |
Cmo04g00243 | 466 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
Cmo04g00243 | 466 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 263 | 341 | IPR004045 | - | |
Cmo04g00243 | 466 | CDD | GST_N_family | 20 | 77 | - | - | |
Cmo04g00243 | 466 | Pfam | Glutathione S-transferase, N-terminal domain | 272 | 340 | IPR004045 | - | |
Cmo04g00243 | 466 | Pfam | Glutathione S-transferase, N-terminal domain | 19 | 87 | IPR004045 | - | |
Cmo04g00243 | 466 | SFLD | Glutathione Transferase (cytosolic) | 272 | 434 | IPR040079 | - | |
Cmo04g00243 | 466 | SFLD | Glutathione Transferase (cytosolic) | 20 | 168 | IPR040079 | - | |
Cmo04g00243 | 466 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 319 | 465 | IPR010987 | - | |
Cmo04g00243 | 466 | Gene3D | - | 90 | 212 | - | - | |
Cmo04g00243 | 466 | Gene3D | - | 343 | 465 | - | - | |
Cmo04g00243 | 466 | CDD | GST_N_family | 273 | 330 | - | - | |
Cmo04g00243 | 466 | Gene3D | Glutaredoxin | 252 | 340 | - | - | |
Cmo04g00243 | 466 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 256 | 464 | - | - | |
Cmo04g00243 | 466 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 1 | 211 | - | - | |
Cmo04g00243 | 466 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 1 | 211 | IPR044627 | GO:0033355|GO:0045174|GO:0098869 | |
Cmo04g00243 | 466 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 256 | 464 | IPR044627 | GO:0033355|GO:0045174|GO:0098869 | |
Cmo04g00243 | 466 | SUPERFAMILY | GST C-terminal domain-like | 355 | 462 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00243 | Cmo-Chr4:1212288 | Cmo04g01285 | Cmo-Chr4:6518889 | 6.14E-126 | dispersed | |
Cmo04g00243 | Cmo-Chr4:1212288 | Cmo04g00245 | Cmo-Chr4:1218654 | 6.30E-47 | proximal | |
Cmo04g00242 | Cmo-Chr4:1210152 | Cmo04g00243 | Cmo-Chr4:1212288 | 4.95E-106 | tandem | |
Cmo04g00243 | Cmo-Chr4:1212288 | Cmo04g00244 | Cmo-Chr4:1215990 | 2.24E-46 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00243 | K21888 | - | cmax:111483829 | 895.96 |