Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00243 ATGGCCATTGAAGTTGCTGTCAAGGCTGCCGTTGGTGCACCCAATGTTATTGGAGACTGTCCTTTCTCTCAGAGGGTTCTCTTAACTTTAGAGGAGAAGAAAGTTCCTTACAAACTGCATCTCATCAATTTATCCGATAAACCCATTTGGTTTCTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTGGTGAAGTTTGATGACAAATGGGTATCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTACCCTGAGCCTTCTCTTGTTACTCCCCCTGAATTTTCTTCTGTGGGATCAAAGACAAATGGTGCTTTCGTGAAAATGTTGAAGAGCAAGGACCCGAATGATGGTTCGGAGCTGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAGAAGGTCACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACAATCTCGATATTGCTCTTGGCCATTTCAAGAAGTGGATATTCCCTGTAAACTTGAACAGTTTATCCAAATACAAAGAGCTGCTTTTCGCTCGAGAATCTTTCATGAAGACAAAGGCTGCCCCAGAACACGTAATTTCTGGTTGGGAGCCCAAGGTGAATGCTGCTGCAGAACCTGTAATTTCTGATAGTGAGCCCAAGGTGAATGCTGCCGCAGAACCTGTAATTTCAGATAGTGAGCCCAAGGCGAATGCTGTCGCAGAACATGTAGTTTCTGATAGTGAGCCCAAGGCCATTGAGGTTGCTGTCAAGGCTGCTGTTGGTGCACTCGATGTTATTGGAGATTGCCCTTTCGCTCAGAGGGTTCTTTTGACTTTGGAGGAGAAGAAAGTTCCTTACAAATGGCATCTCATCGATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCGGTGGCCAAGATTGACGACAAATGGGTTCCCGACTCCGATGTCATTGTCGGGATTCTTGAGGAGAAGTATCCCGAGCCTTTTCTTGCGACTCCACCTGAATTTTCTTCTGTGGGATCAAAGATAAGTGGTGCTTTTGTAAAATTCTTGAAGAGTAAGGACCCGAACGATGGTTCGGAGCAGGCTTTGCTTGAAGAATTGAAGGCGTTGAACGAGCATCTCAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTTACCGCCGTTGATTTGAGTCTGGCACCGAAGCTTTACCATCTTGATGTCGCACTTGGCCATTTCAAGAAGTGGATTTTCCCTGAAAACTTAACCAGTTTATCCAAATACAAAGAGTTGCTTTTCGCTCGAGAATCGTTTGTGAAGACGAAGGCTGCCCCAGAACATGTAATTTCTGGTTGGGAGGCCAAAGTGAATGCTGCATGA 1401 46.04 MAIEVAVKAAVGAPNVIGDCPFSQRVLLTLEEKKVPYKLHLINLSDKPIWFLEVSPEGKVPVVKFDDKWVSDSDVIVGILEEKYPEPSLVTPPEFSSVGSKTNGAFVKMLKSKDPNDGSELALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYNLDIALGHFKKWIFPVNLNSLSKYKELLFARESFMKTKAAPEHVISGWEPKVNAAAEPVISDSEPKVNAAAEPVISDSEPKANAVAEHVVSDSEPKAIEVAVKAAVGALDVIGDCPFAQRVLLTLEEKKVPYKWHLIDLSDKPSWFLEVSPEGKVPVAKIDDKWVPDSDVIVGILEEKYPEPFLATPPEFSSVGSKISGAFVKFLKSKDPNDGSEQALLEELKALNEHLKAHGPYVAGEKVTAVDLSLAPKLYHLDVALGHFKKWIFPENLTSLSKYKELLFARESFVKTKAAPEHVISGWEAKVNAA 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1212288 1215875 - CmoCh04G002430.1 Cmo04g00243 379218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00243 466 Pfam Glutathione S-transferase, C-terminal domain 123 167 - -
Cmo04g00243 466 Pfam Glutathione S-transferase, C-terminal domain 371 424 - -
Cmo04g00243 466 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cmo04g00243 466 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Cmo04g00243 466 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 66 212 IPR010987 -
Cmo04g00243 466 SFLD Main (cytGST) 272 434 - -
Cmo04g00243 466 SUPERFAMILY GST C-terminal domain-like 103 210 IPR036282 -
Cmo04g00243 466 SUPERFAMILY Thioredoxin-like 270 340 IPR036249 -
Cmo04g00243 466 Gene3D Glutaredoxin 1 89 - -
Cmo04g00243 466 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 263 341 IPR004045 -
Cmo04g00243 466 CDD GST_N_family 20 77 - -
Cmo04g00243 466 Pfam Glutathione S-transferase, N-terminal domain 272 340 IPR004045 -
Cmo04g00243 466 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Cmo04g00243 466 SFLD Glutathione Transferase (cytosolic) 272 434 IPR040079 -
Cmo04g00243 466 SFLD Glutathione Transferase (cytosolic) 20 168 IPR040079 -
Cmo04g00243 466 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 319 465 IPR010987 -
Cmo04g00243 466 Gene3D - 90 212 - -
Cmo04g00243 466 Gene3D - 343 465 - -
Cmo04g00243 466 CDD GST_N_family 273 330 - -
Cmo04g00243 466 Gene3D Glutaredoxin 252 340 - -
Cmo04g00243 466 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 256 464 - -
Cmo04g00243 466 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 - -
Cmo04g00243 466 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 211 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cmo04g00243 466 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 256 464 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cmo04g00243 466 SUPERFAMILY GST C-terminal domain-like 355 462 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00243 Cmo-Chr4:1212288 Cmo04g01285 Cmo-Chr4:6518889 6.14E-126 dispersed
Cmo04g00243 Cmo-Chr4:1212288 Cmo04g00245 Cmo-Chr4:1218654 6.30E-47 proximal
Cmo04g00242 Cmo-Chr4:1210152 Cmo04g00243 Cmo-Chr4:1212288 4.95E-106 tandem
Cmo04g00243 Cmo-Chr4:1212288 Cmo04g00244 Cmo-Chr4:1215990 2.24E-46 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00243 K21888 - cmax:111483829 895.96