Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00245 ATGGCCCTCGAAGCTGCGGTCAAGGCTGCCGTGGGTGCGCCCGATCTTATTGGGGACTGCCCTTTCAGCCATCGGGTCCTGTTAACTTTGGAGGAGAAGAAACTTTGCTACGAGGTGCATCTCATTAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCCGGAGGGAAGGTGCCGGTGGTGAAGTTTGATGACAAATGGGTATCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTACCCTGAGCCTTCGCTTGTTACTCCTCCTGAACTTTCTTCTGTGTAA 297 50.84 MALEAAVKAAVGAPDLIGDCPFSHRVLLTLEEKKLCYEVHLINLSDKPSWFLEVSPGGKVPVVKFDDKWVSDSDVIVGILEEKYPEPSLVTPPELSSV 98
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1218654 1219301 - CmoCh04G002450.1 Cmo04g00245 379220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00245 98 Gene3D Glutaredoxin 1 89 - -
Cmo04g00245 98 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cmo04g00245 98 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 3 98 - -
Cmo04g00245 98 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 98 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cmo04g00245 98 CDD GST_N_family 20 77 - -
Cmo04g00245 98 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Cmo04g00245 98 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00245 Cmo-Chr4:1218654 Cmo04g01285 Cmo-Chr4:6518889 4.39E-52 dispersed
Cmo04g00243 Cmo-Chr4:1212288 Cmo04g00245 Cmo-Chr4:1218654 6.30E-47 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00245 K21888 - cmax:111483829 169.474