Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00251 ATGATACTCTCGGAGACCCCAAAGAGTTCTAATAAATTAATGCACATCAAAGAATTCTTTGGCTTCTCCCACTCCTCTTCTTCCTTCCCCACCTCCGGCCGCCGGCCTTCGCTGCCGTCGAGCTATGACCCTTCCCAATTGGCGGCCATGGAAGAGGCTATCACGAACTCGGAACCCATCATCATGAAATGGGACCCGGATTCCTCTGAGTTCAATAGAATTACCTTCCTCTTCCGCCACGGCCGAGCTGAATCCGACGAGTTTTTGAACTCCGTTAATGAGCTCCGGCGGACAATGGACTTTGTCATATCCGAGAATTCCACCTCCAACGTCCTTGTTTTAGCTCAAAAGCTGATGCAGGCTGCCATGAGACGACTCGAGAAGGAGTTCTACCAGATTTTGAGTGAGAATCGCCAGAATATCGACCCGGAATCCTTTTCTGGTAGATCTTCTGATAGGTCAACGCCCGACGGGGAAAGCAGAGGGGATTCTGTCGGCGACGTCGACAGAGTCTCGGCGGACTTGAAATCGATTGCTGATTGCATGATTGATTCTGGGTATGGCAAAGAGTGTGTTCAAATCTACAAAGTAATCCGAAAATCGATCGTCGATGAAACTCTGTATCGGCTCGAAACAGAGAAGTTCAAACTTTCGAGAATTCAGAGATGGAATTGGGATTCGGTGGAACATGTGATTAAGATTTGGATGAATTCGATCAAGATCGCCGTGAATACTCTGTTTCGTGGAGAGAAAATTCTCTGCGATCATGTTTTTTCGAGGTCGGAAAGAATCCGAGAATCCTGTTTTTCCGACATCACAAAAGATGGTGCAATCACGTTGTTTAGATTCCCGGAATTGGTCGCAAAGGGGAAGAAAGATTCCGACAAAATCTTTCTGTTAATGGAGCTTTACGAAGCGAGTTACGAAGTCTTGCCGGAAATTGAGGTAATATTCGACTCTGTTTCGACGTCCGCCATTAAAACGCAAGCTCAAACGTCAATGGTGAAGCTTGCGGATTTAATCCGTGACATTCTGTATGAATTTGAGCTGACAATTCAGAAATATTCATCCAAGACTCCGGCCCCTGGCGGCGGAATCCACCCACTGACCCGATCGGCGATGAACTACATCTCATCGCTGGGAGATTATAGTGGGACTCTCTCCGACATCATTCCCACCGGAAAATCTCATATTCCAGCGTCGTACATGGAAACCAACGCCGTCGACGACGGTATCTCGTCTCCAGTAGCGGCGCAACTCGGGTGGTTAATTCTAGTCCTCCTCTGCAAACTCGACACAAAAGCAGCTCTCTACAAAGACGTATCTCTCTCCTATCTCTTCCTCGCCAACAACCTGAATTTCATCGTGAAGACAGTAACGGCGACCAATCTAAGAAGCCTCCTCGGCGGCGAGTGGGAGGCGAATCACACGAGCAAGATGAAGGTGTACACAGCGAACTACGAAGCGACGGCGTGGAACAGAGTGATGTCGTGTCTGCCGGAGAGGGGTTCGACGGAAGTGGGGTCGCCGGAGACGGCGAAGGAGGGGTTTAGAAAGTTCAATGCAGCGTTTGAAGAGGCGTACCGGAAACAGACGTCGTGGAGGGTGGAGGACGGGAAGCTGAGAGACGAGCTGAAAATGTGTATAGCGAGGAAGGTGGTGCCGAGGTACAGGGAGTTTTACGAGGGGTGCGCTGAGACGGTGGGTGTGGAGAGAGGGGTTTTGAGGTTCTCTCCCGATGATTTGGGGAAGTATTTGTCGGATTTGTTTCATGGGGTTTCTTCCTCCGGTAGTACTTCTTCTTCCTCTTCTTTTCACAGTGTTTGA 1827 49.37 MILSETPKSSNKLMHIKEFFGFSHSSSSFPTSGRRPSLPSSYDPSQLAAMEEAITNSEPIIMKWDPDSSEFNRITFLFRHGRAESDEFLNSVNELRRTMDFVISENSTSNVLVLAQKLMQAAMRRLEKEFYQILSENRQNIDPESFSGRSSDRSTPDGESRGDSVGDVDRVSADLKSIADCMIDSGYGKECVQIYKVIRKSIVDETLYRLETEKFKLSRIQRWNWDSVEHVIKIWMNSIKIAVNTLFRGEKILCDHVFSRSERIRESCFSDITKDGAITLFRFPELVAKGKKDSDKIFLLMELYEASYEVLPEIEVIFDSVSTSAIKTQAQTSMVKLADLIRDILYEFELTIQKYSSKTPAPGGGIHPLTRSAMNYISSLGDYSGTLSDIIPTGKSHIPASYMETNAVDDGISSPVAAQLGWLILVLLCKLDTKAALYKDVSLSYLFLANNLNFIVKTVTATNLRSLLGGEWEANHTSKMKVYTANYEATAWNRVMSCLPERGSTEVGSPETAKEGFRKFNAAFEEAYRKQTSWRVEDGKLRDELKMCIARKVVPRYREFYEGCAETVGVERGVLRFSPDDLGKYLSDLFHGVSSSGSTSSSSSFHSV 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1243469 1245295 - CmoCh04G002510.1 Cmo04g00251 379226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00251 608 Gene3D Exocyst complex component Exo70 67 599 - -
Cmo04g00251 608 PANTHER EXOCYST COMPLEX PROTEIN EXO70 40 601 IPR004140 GO:0000145|GO:0006887
Cmo04g00251 608 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 40 601 - -
Cmo04g00251 608 SUPERFAMILY Cullin repeat-like 52 591 IPR016159 -
Cmo04g00251 608 MobiDBLite consensus disorder prediction 24 43 - -
Cmo04g00251 608 Pfam Exo70 exocyst complex subunit 235 588 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo04g00251 608 MobiDBLite consensus disorder prediction 141 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00251 Cmo-Chr4:1243469 Cmo13g00162 Cmo-Chr13:1042791 1.53E-166 dispersed
Cmo01g00589 Cmo-Chr1:2986280 Cmo04g00251 Cmo-Chr4:1243469 9.93E-170 wgd
Cmo14g00163 Cmo-Chr14:726507 Cmo04g00251 Cmo-Chr4:1243469 0 wgd
Cmo04g00251 Cmo-Chr4:1243469 Cmo04g01289 Cmo-Chr4:6535475 0 wgd
Cmo04g00251 Cmo-Chr4:1243469 Cmo07g01009 Cmo-Chr7:4983705 4.58E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00251 K07195 - csv:101221801 913.294