Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00269 ATGTTGAATCTTAACGATTTGATTATCAACTGCGATGAAACTTCGACGAATCGGACTGTAATGGAAGATTCTGAGACGTCGAATTCTTCTGTCGTGAATGCCGATGAGGTCTGCAACAGTAGAGATGAAGATTCCTCTGTTTTAATCTTCAATATTCTGAAAAGGGAAAATTCCGGCGGTGGTGGGGGTGGTGCGTCGCGGGAATTAGTGACTCAGGCGCTCTTTCCAGTGGCTGGAGGGTGGGGAGAAACTGGGTCTCCGGTTCCGAAGTCCCATTGGTTGAACCTGTCGTCGACTGGTGATTTCGGCGGCGAAGGCGTCGGTGGAGGAACTGCAGAGCTGAAAATTGTGCAGCAGAAACAGCAGCAGGTGAGGAAGAGCCGCCGTGGGCCGCGGTCCCGGAGTTCCCAGTACCGGGGAGTTACTTTTTACCGGCGCACAGGAAGATGGGAATCTCATATTTGGGATTGTGGGAAACAATTTGGGTTTGAATTTTCCCAGGTGGGTTCGACACTGCCCATGCTGCAGCAAGTAAATATCATATATTTTATATTAAAATTTATGGGTTTTGTTACAAGCAGGGCATATGATCGAGCAGCGATCAAATTTAGGGGAGTAAATGCAGATATAAACTTCAATATAAGCGACTACGATGAAGATATGAAGCAACTGAAAAATCTAAGCAAAGAAGAATTTGTGCACGTTCTTCGTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAGCTGAGAGGATTATCTCTTCAGAAATATGGAAGATGGGAAACTCAAACGAGTCCACTTATGACGAAGAATGAAATCGAGGAAAGGTCGACAATGGTAGATGCAAACAATGGAGGCAATGGGCATAATCTTGATCTAAGCATTGGAGGAATTTTCAACTACCATTTAAGAAATTCTTCCCAAAACCTCAACATTCAAACACCAAAGAAAGAAAACAATGGTGGTGGTGGGTATGGTGTGGGTGGACAACAGCCGCATATTCCTCCTATGTGGTCTGGTTTTTGCTCCGGTTTTTTAGCAGATAATCAGGAAAGAAGAGAGAGGAGAAGCTACCCGTCAAAGACCCTTACGAGCTCGGGATGGCCAATGGCAATGCCGATATCGATGCCGATGTCGGTTCAAGAAAATGGGAGTAATGGAATAAGAGCAAGAGAAGAAGCTCATGTTTCCAAGAGTGCAGCATCATCAGGATTCTCTTCCTCTTCTAATTTTGGTTCACCTTATCCCCAAAATACCCCTCCCCTCCACAATACTCTCTGCCTTCCAACACCTTCCCCCAACATTTCTTGA 1314 45.51 MLNLNDLIINCDETSTNRTVMEDSETSNSSVVNADEVCNSRDEDSSVLIFNILKRENSGGGGGGASRELVTQALFPVAGGWGETGSPVPKSHWLNLSSTGDFGGEGVGGGTAELKIVQQKQQQVRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQFGFEFSQVGSTLPMLQQVNIIYFILKFMGFVTSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLRGLSLQKYGRWETQTSPLMTKNEIEERSTMVDANNGGNGHNLDLSIGGIFNYHLRNSSQNLNIQTPKKENNGGGGYGVGGQQPHIPPMWSGFCSGFLADNQERRERRSYPSKTLTSSGWPMAMPISMPMSVQENGSNGIRAREEAHVSKSAASSGFSSSSNFGSPYPQNTPPLHNTLCLPTPSPNIS 437
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1358706 1361898 + CmoCh04G002690.1 Cmo04g00269 379244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00269 437 Gene3D AP2/ERF domain 136 215 IPR036955 GO:0003700|GO:0006355
Cmo04g00269 437 MobiDBLite consensus disorder prediction 400 437 - -
Cmo04g00269 437 SMART rav1_2 137 219 IPR001471 GO:0003700|GO:0006355
Cmo04g00269 437 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 1 161 - -
Cmo04g00269 437 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 192 416 - -
Cmo04g00269 437 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 161 - -
Cmo04g00269 437 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 192 416 - -
Cmo04g00269 437 MobiDBLite consensus disorder prediction 393 437 - -
Cmo04g00269 437 ProSiteProfiles AP2/ERF domain profile. 137 213 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00269 Cmo-Chr4:1358706 Cmo02g00534 Cmo-Chr2:3034021 4.47E-45 dispersed
Cmo14g00175 Cmo-Chr14:787506 Cmo04g00269 Cmo-Chr4:1358706 8.17E-45 wgd
Cmo02g00859 Cmo-Chr2:5223165 Cmo04g00269 Cmo-Chr4:1358706 7.31E-56 wgd
Cmo20g00493 Cmo-Chr20:2325892 Cmo04g00269 Cmo-Chr4:1358706 1.80E-55 wgd
Cmo04g00269 Cmo-Chr4:1358706 Cmo04g01310 Cmo-Chr4:6668332 1.62E-79 wgd
Cmo04g00269 Cmo-Chr4:1358706 Cmo06g00342 Cmo-Chr6:1658640 1.25E-43 wgd
Cmo04g00269 Cmo-Chr4:1358706 Cmo07g00986 Cmo-Chr7:4842641 3.89E-52 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00269 K09284 - csv:101204131 494.582