Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00419 ATGGCGGAGGGTGAATTGGAGAGGGGCGAGACCAATTGTGGCCTTGCTTCAATGGATTCCATCGAATCGCGATGGGTATTTCAGGATGAGGATCAATCGGAGATCGACGACGACGAGGATGAGGAAGACGACGACGAGGATGCAGAGCGGAATCGTCTGGATTTGGAATCTGAGGAAGAAGATAATGTTGAGCAGAAATTGATTCGCACTGGTCCGCGGATTGATTCATTCGATGTCGAAGCCCTTGAGGTCCCTGGTGCGCAGAGAAATGACTACGAGGACTTCAGCGTGGGGAAGAAAATCGGTCTTGCTTTCCAGACCCTTGGGGTTGTATTCGGTGATGTTGGGACAAGCCCTCTATATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGATGAAGATGTTATTGGGGCATTATCTCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTACTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCGTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTCCTCCCAAATCAACTTCCTTCAGATACCCGAATATCAAGTTTTAGGTTAAAGGTGCCATCGGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCTTGACTTTAAAGAAGCTTATTTTGATTCTCGTTCTTGCTGGAACTTCTATGGTAATAGCTGATGGAGTTGTTACACCAGCAATGTCGGTAATGTCAGCTGTTGGTGGACTAAAGATTGCAGTGGACGCAATTAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTTTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTATTCATATGGTTTTGTACTCTTGCAGGCCTTGGGATTTATAACCTTGTCATATATGACCGCAGTGTCTTGAAGGCGTTCAATCCCGTTCATATATATTATTTCTTCAAAAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTATTTTATGTGCTACCGGTTCCGAGGCGATGTTTGCAGATCTTTGCTATTTCCCTGTGCGGTCAATACAGCTTACATTTGTCTTCCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTGATATCAAACCACAATGGAGCTGAGCATGTTTTTTATAATTCCGTTCCCAAAAGTGCCTTCTGGCCAGTTTTTCTCATCGCTAATGTTGCTGCATTAATTGCCAGTAGAGCAATGACTACGGCTACCTTTTCGTGTATAAAACAATCGACAGCACTTGGATGTTTTCCTCGTCTTAAGATCATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCAGTTTGCCTGGTGGTCATCTGCTCCATATCTAGCATGTATGAGATTGGAAACGCATATGGTATTGCTGAGCTGGGAGTGATGATGATGACAACTATCTTGTTAACCATTGTAATGCTTCTTATATGGCAGATAAATATTATCATCGTGATGGGTTTTGCGATGATCTTTCTTGGGATAGAACTGATATTTTTCTCGTCTGTCTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTCTTCGCAGTGATTATGTTCTTCATTATGTATATCTGGAACTACGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAACAAAAGCTGTCAATGGATTTAATGCGGGAACTCGGATGCAATCTCGGGACAATCAGAGCTCCTGGCATCGGTTTGGTCTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCTGTTCATTCAATGATCATATTTGTCTGTATCAAGTATGTACCAGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGCTATCACATTTTTCGCTGCATTGCCAGGTATGGTTACAAGGATGTCCGAAAAGAAAATCATCAGGTATTTGAGCAGCTCTTAATTGAAAGCCTTGAGAAATTCATCCGTCGAGAAGCACAAGAAAGATCATTAGAGAGTGATGGAGATGACGATACTGATTCCGACGAGATCCATAGGTCGCAACTTCTCATAGCCCCCAATGGAAGTGTCTATTCACTTGGCATTCCTCTCCTCGCTGAATTCAACGAGGCTAGACCCATAACTGAAATCATCAACGTACCAGAAGAGGTGCAGCCAATTGAATCTCTAGACCCCTCAATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCCTTTATAAGAAAGGCTAAAGAATCAGGAGTAGTGTACCTTCTCGGTCATGGAGACATTAGAGCAAGAAAGGATTCTTGGTTTATCAAGAAGCTGATGATCAATTACTTCTATGCGTTTTTAAGAAAGAACAGTAGGAGGGGCATTGCCAACTTGAGTGTTCCCCACACCCACCTGATGCAGGTTGGCATGACATATATGGTTTAG 2550 42.9 MAEGELERGETNCGLASMDSIESRWVFQDEDQSEIDDDEDEEDDDEDAERNRLDLESEEEDNVEQKLIRTGPRIDSFDVEALEVPGAQRNDYEDFSVGKKIGLAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLILILVLAGTSMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGLGIYNLVIYDRSVLKAFNPVHIYYFFKRNSTNAWYCLGGCILCATGSEAMFADLCYFPVRSIQLTFVFLVLPCLFLGYLGQAAYLISNHNGAEHVFYNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVICSISSMYEIGNAYGIAELGVMMMTTILLTIVMLLIWQINIIIVMGFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLVYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQVFEQLLIESLEKFIRREAQERSLESDGDDDTDSDEIHRSQLLIAPNGSVYSLGIPLLAEFNEARPITEIINVPEEVQPIESLDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNSRRGIANLSVPHTHLMQVGMTYMV 849
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2077457 2086936 - CmoCh04G004190.1 Cmo04g00419 379394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00419 849 MobiDBLite consensus disorder prediction 31 54 - -
Cmo04g00419 849 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 848 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g00419 849 PANTHER POTASSIUM TRANSPORTER 7 23 848 - -
Cmo04g00419 849 TIGRFAM kup: potassium uptake protein 103 849 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g00419 849 Pfam K+ potassium transporter 104 677 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g00419 849 MobiDBLite consensus disorder prediction 1 63 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00419 Cmo-Chr4:2077457 Cmo14g01424 Cmo-Chr14:11605386 0 dispersed
Cmo04g02031 Cmo-Chr4:10959569 Cmo04g00419 Cmo-Chr4:2077457 0 transposed
Cmo16g00274 Cmo-Chr16:1231457 Cmo04g00419 Cmo-Chr4:2077457 1.10E-94 transposed
Cmo16g00273 Cmo-Chr16:1224915 Cmo04g00419 Cmo-Chr4:2077457 1.67E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00419 - - csv:101214942 1519.6