Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00421 ATGGAAACTGAGTTTTTGGTTTTGGATTATGAACTGGTTCAGTTTTTGATTTTATGCATCATGTTTGTAGGAGGACGTTCGTCATGTAGCTCCGGAAAGGGCCGGGGCAATCAATGCCCTGCGAAATATGGTTTTAGTTTGGTAAAAGGCAAGGCAAATCATCCCATGGAAGATTATCATGTTGCTAAATTTATCACAGTGCATGGCCAGGAGCTTGGCCTCTTTGCTATATATGATGGGCACTTAGGAGATAGCGTACCAGCCTATCTACAGAAGCATCTATTTCCCAATATTCTCAAGGATGAGGAATTCTGGTCGAATCCGCGTAGCTCTATCTTTAAGGCGTATGAGACGACAGACCAAGCAATACTCTCGCACAGTCCTGACTTGGGAAGAGGTGGATCCACTGCTGTCACTGCAATTTTAATAAACGGTCAAAAATTATGGGTGGCTAATGTCGGAGATTCACGAGCAGTCCTTTCGAAAAGAGGGCAGGAAGTACAAATGTCTGTCGATCACGAACCGAACACTGAGCGTGGAAGCATCGAGGACAGAGGTGGCTTTGTCTCTAACATGCCAGGAGATGTTGCTAGAGTGAACGGGCAACTCGCAGTTTCTCGAGCGTTTGGCGACAAGAACCTCAAAACACACTTACGATCTGATCCCGACATAAAGAACGCCGATATCAACTCTGACACCGAGCTTCTAATCTTAGCAAGCGATGGTCTATGGAAGGTCATGTCGAATCAAGAAGCCGTGGACATAGCGAGAAGAACTAAAGATCCCCAGAGGGCAGCAAAGCAACTAGCAGCAGAAGCACTGAAACGGGAAAGCAAAGACGACATCTCGATCATCGTCGTTCGTTTCAAAGGGTAA 876 46.0 METEFLVLDYELVQFLILCIMFVGGRSSCSSGKGRGNQCPAKYGFSLVKGKANHPMEDYHVAKFITVHGQELGLFAIYDGHLGDSVPAYLQKHLFPNILKDEEFWSNPRSSIFKAYETTDQAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRAVLSKRGQEVQMSVDHEPNTERGSIEDRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIKNADINSDTELLILASDGLWKVMSNQEAVDIARRTKDPQRAAKQLAAEALKRESKDDISIIVVRFKG 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2094354 2097469 + CmoCh04G004210.1 Cmo04g00421 379396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00421 291 CDD PP2Cc 42 289 IPR001932 -
Cmo04g00421 291 ProSiteProfiles PPM-type phosphatase domain profile. 42 289 IPR001932 -
Cmo04g00421 291 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 22 290 - -
Cmo04g00421 291 PANTHER PROTEIN PHOSPHATASE 2C 22 290 IPR015655 GO:0004722|GO:0006470
Cmo04g00421 291 SUPERFAMILY PP2C-like 39 290 IPR036457 -
Cmo04g00421 291 Pfam Protein phosphatase 2C 51 282 IPR001932 -
Cmo04g00421 291 SMART PP2C_SIG_2 53 289 IPR001932 -
Cmo04g00421 291 SMART PP2C_4 38 287 IPR001932 -
Cmo04g00421 291 Gene3D - 38 291 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01653 Cmo-Chr1:12520186 Cmo04g00421 Cmo-Chr4:2094354 6.96E-150 dispersed
Cmo04g00421 Cmo-Chr4:2094354 Cmo09g00547 Cmo-Chr9:2610033 1.53E-147 dispersed
Cmo16g00270 Cmo-Chr16:1199573 Cmo04g00421 Cmo-Chr4:2094354 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00421 K17506 - csv:101214223 511.146