Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00431 ATGCCAACCAGTGCCTCTCAATCGCCGGATAATCAGCTGTCGCCGCCGAACCCACCTCCCAAACAAGGCGCTAAGCCAATCCCATTTCTGATTTCGGTTGCTATTGGCATCATTGTTCGTTTCGCCGTCCCAAAACCGGCGGGGGTTTCAACAAAAGCGTGGCAGTTGCTCGCCATTTTCTTGTCGACGATTACTGGCCTTGTTTTGAATCCCTTGCCGGTGGGTGCTTGGGCGATTCTTGGCTTAACTGTGACTGTTGTTACTAAAACTTTGACGTTTTCTGCTGCTTTTAATGCCTTTACTAGTGAGGTTATTTGGTTGATTGTGATTTCCTTCTTTTTCGCTCGTGGGTTTGTCAAAACTGGATTGGGGGATCGAATCGCGACATATTTTGTTAAATGGATGGGCAAGAGCACGCTTGGTTTGTCTTATGGGTTAACGATTAGTGAGGCTTTGATAGCTCCTGCTATGCCGAGCACCACCGCCAGGGCTGGTGGTGTGTTCTTGCCCATCATTAAATCCTTGTCGCTCGCTGCTGATAGCAAGCCGAACGACCCTTCTTCTAAAAAGATTGGCGCGTATCTCGTTCAGTCTCAGTTTCAGAGTGCTGGTAACTCTAGTGCCCTGTTCTTAACGGCTGCTGCTCAAAATTTGTTGTGTATTAAACTGGCTGAGCAGCTCGGTGTGCAAATATCTAGCCCTTGGCTTACATGGGCTAAGTTTGCTTGTGTCCCTGCCATCATTGGTCTATTGGCAACGCCTGCAATCTTATATAAGCTGTTTCCTCCAGAGACCAAAAACACGCCAGAAGCTCCAGCCATGGCTGCTAGAAAATTGGAGGCTATGGGTCCTGTCACCAAGAATGAATGGTTCATGGTTGGTACTATGCTTGTTGCTGTGTCTTTATGGATTGCTGGTGAGAAACTTAAAATGGCTAGTGTTGTGGCTGCTATGATTGGTTTGTCTGTGCTTCTTAGTCTTGGTGTTCTTGATTGGGATGATTGTTTGTCTGAGAAGTCGGCTTGGGATACTTTGGCTTGGTTTGGTGTTCTTGTGGGCATGGCGGGACAGTTGACGACGCTCGGTCTTGTCGGTTGGATGTCGAATTCTGTGGCGGATTTGCTGAAGTCTATGTCGCTCAGCTGGCCTGCTGCGTTGGCTATTCTTCAGGTGTTGTATTTCTTTGTTCATTACTTGTTTGCTAGCCAGACTGGTCATGTTGCTGCTTTGTACTCGGCGTTCCTTGCTATGCACTTGGCTGCTAAGGTGCCTGGTGTGTTGGCTGCTTTGGCGTTGGCTTATAACACTAATCTCTTTGGTGCATTGACTCATTATAGCAGTGGCCAAGCTGCTGTTTACTATGGAGGGGGTTTCGTTGAGCTAAGAGATGTATTCAAAGTCGGTTTAGCAATGGCGCTCATAAACGGTACAATCTGGACTGTATTTGGTTGCATTTGGTGGAAGATTCTGGGTCTGTACTGA 1482 47.5 MPTSASQSPDNQLSPPNPPPKQGAKPIPFLISVAIGIIVRFAVPKPAGVSTKAWQLLAIFLSTITGLVLNPLPVGAWAILGLTVTVVTKTLTFSAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNDPSSKKIGAYLVQSQFQSAGNSSALFLTAAAQNLLCIKLAEQLGVQISSPWLTWAKFACVPAIIGLLATPAILYKLFPPETKNTPEAPAMAARKLEAMGPVTKNEWFMVGTMLVAVSLWIAGEKLKMASVVAAMIGLSVLLSLGVLDWDDCLSEKSAWDTLAWFGVLVGMAGQLTTLGLVGWMSNSVADLLKSMSLSWPAALAILQVLYFFVHYLFASQTGHVAALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGGGFVELRDVFKVGLAMALINGTIWTVFGCIWWKILGLY 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2140957 2143489 + CmoCh04G004310.1 Cmo04g00431 379406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00431 493 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 5 493 IPR030676 -
Cmo04g00431 493 MobiDBLite consensus disorder prediction 1 22 - -
Cmo04g00431 493 Pfam Sodium:sulfate symporter transmembrane region 29 492 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cmo04g00431 493 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 44 487 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cmo04g00431 493 PANTHER DICARBOXYLIC ACID TRANSPORTER2 5 493 - -
Cmo04g00431 493 PIRSF DASS 15 493 IPR030676 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00431 Cmo-Chr4:2140957 Cmo20g00085 Cmo-Chr20:442145 8.32E-151 dispersed
Cmo16g00263 Cmo-Chr16:1165773 Cmo04g00431 Cmo-Chr4:2140957 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00431 - K03319 cmax:111485827 911.368