Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00501 | ATGGGAAGCATTGAAGAACAGAGGACTGTAACAGGGCTCGCCGCCAAAGACCCATCCGGGATTCTGTCTCCCTACACTTATACTCTCAGAAACACCGGCCCTGAAGATGTTTTCATTAAAGTGATTTGCTGTGGAGTATGCCACTCTGATCTTCACCAAATCAAAAATGACCTCGGCATGTCCAATTATCCGATGGTTCCTGGACATGAGGTGGTCGGAGAAGTGGTGGAGGTTGGGTCGGATGTTGGTCGGTTTAGAACAGGGGAGTTGGTCGGAGTTGGGTGTATTGTTGGATCTTGTTCGAGTTGTAATCCTTGCAATTCCGATAAGGAGCAGTATTGTAACAGGAGAATCTGGAGTTATAATGATGTGTATCATGATGGCCGTCCCACCCAAGGCGGGTTCTCCTCCGCCATGGTCGTTCACCAAAAATTTGTGGTGAAAATCCCAGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTGTTGTGCGCCGGAGTGACAGTGTACAGCCCGCTGAGTCACTTTGGGCTGAAACAGAGTGGACTCAGAGGTGGAATTTTGGGGCTAGGCGGCGTGGGGCATATGGGTGTGAAAGTGGCGAAGGCGCTGGGTCACCACGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGGTGGAGGCTCTGGAAGATCTCGGCGCCGATGAGTACTTGGTCAGCTCCGACAGTACTCAAATGGAACGAGCCATTGATTCGCTGGATTACATCATTGACACAGTCCCTGTTTTTCATCCTCTCGAGCCGTATCTGTCACTTCTGAAACTCGACGGCAAATTGATCTTGATGGGCGTTATTAATAAGCCATTGCAATTCGTTTCCCCTGTTCTTATGCTCGGTAAATTTCACAAAGTTAATCTCGCCGGCAATGGTGCTCTGTTTTCAACTCTGTTTTTAACTCTGTTTATTTGGGGACGAACAGGGAGGAAGACGATTACGGGGAGCTTCATCGGAAGCATGACGGAGACGCAAGAAGTGTTGGATTTCTTCAAAGAGAAGGAGCTAACCTCCATAATTGAAGTGATAAAGCTTGATTACATTAACCAGGCTTTGGAGAGGTTGGAGAAGAATGACGTCAGATACAGGTTCGTCGTCGATGTCGCCGGAAGCAAGTTGCCTCAGTGA | 1158 | 49.48 | MGSIEEQRTVTGLAAKDPSGILSPYTYTLRNTGPEDVFIKVICCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVGRFRTGELVGVGCIVGSCSSCNPCNSDKEQYCNRRIWSYNDVYHDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSEKKRVEALEDLGADEYLVSSDSTQMERAIDSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINKPLQFVSPVLMLGKFHKVNLAGNGALFSTLFLTLFIWGRTGRKTITGSFIGSMTETQEVLDFFKEKELTSIIEVIKLDYINQALERLEKNDVRYRFVVDVAGSKLPQ | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2509137 | 2510695 | + | CmoCh04G005010.1 | Cmo04g00501 | 379476 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00501 | 385 | PANTHER | ALDEHYDE REDUCTASE | 318 | 385 | - | - | |
Cmo04g00501 | 385 | Gene3D | - | 349 | 378 | - | - | |
Cmo04g00501 | 385 | Gene3D | - | 14 | 163 | - | - | |
Cmo04g00501 | 385 | CDD | CAD1 | 11 | 377 | - | - | |
Cmo04g00501 | 385 | SUPERFAMILY | GroES-like | 17 | 181 | IPR011032 | - | |
Cmo04g00501 | 385 | Pfam | Alcohol dehydrogenase GroES-like domain | 35 | 149 | IPR013154 | - | |
Cmo04g00501 | 385 | Gene3D | - | 164 | 292 | - | - | |
Cmo04g00501 | 385 | Gene3D | - | 318 | 348 | - | - | |
Cmo04g00501 | 385 | PANTHER | ALDEHYDE REDUCTASE | 6 | 292 | - | - | |
Cmo04g00501 | 385 | Pfam | Zinc-binding dehydrogenase | 191 | 289 | IPR013149 | - | |
Cmo04g00501 | 385 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 68 | 82 | IPR002328 | GO:0008270|GO:0016491 | |
Cmo04g00501 | 385 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 6 | 292 | - | - | |
Cmo04g00501 | 385 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED | 318 | 385 | - | - | |
Cmo04g00501 | 385 | SMART | PKS_ER_names_mod | 20 | 376 | IPR020843 | GO:0016491 | |
Cmo04g00501 | 385 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 153 | 293 | IPR036291 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g00501 | Cmo16g00363 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00501 | Cmo-Chr4:2509137 | Cmo20g01090 | Cmo-Chr20:10384192 | 4.39E-116 | dispersed | |
Cmo11g01393 | Cmo-Chr11:9761168 | Cmo04g00501 | Cmo-Chr4:2509137 | 0 | wgd | |
Cmo16g00363 | Cmo-Chr16:1669071 | Cmo04g00501 | Cmo-Chr4:2509137 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00501 | K00083 | - | csv:101222395 | 603.208 |