Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g00523 | ATGGGCCACACCGGAGGCGTTGCCGGTGTCCGCCATGGTGTTGATTCATGGCCCGATTTGTTCTACCGCTCGCCGCCTTCCCGTGCACTGATCGGTGGAGTTGATGATTCGAATTCCCGGGTATTCGACGGCGATCGGATTTCGGAATTGGGGAGATGTGAGGAGTGGTTGGAGAAAGAAGACGCCGTGACGTATTCTAGGGATTCCGGAAGGAGCCTATATTGGTTTCTGGTTCTGATGAGGTTTGTTTCGTTTTTGGATTCCGGGAGGAAATCTTGTGCTATAGGAAGTGAATTTAAGGTCAATTCAAGTAGAGATTCCGATGCTGCGTTTGGTTTAGATCACCAGGGTGGAATGCCTTCAATTCTTCAATCCATGGTATCAACTCTATATTTTGCAGAGAACAATATTGTCCAGGCACGACGGAATGGTTATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTTTTGGATACTTCTCCTGGGCCGAGTACGATATCATGGCTCCAGTGCAGGCAAAGAATGAGAGTGCCCTTGCAGCTGCTTTCATTTTTGCAGTTGGGTTGACACAGAGGCAAGCTTTATATACCTTAAGATTTCAAGGGGATTCTGATCTCAGAAAACATGTGGAAGATAACCCATGTGCCAAATTTGAAGCCATTTTCATATAG | 678 | 46.46 | MGHTGGVAGVRHGVDSWPDLFYRSPPSRALIGGVDDSNSRVFDGDRISELGRCEEWLEKEDAVTYSRDSGRSLYWFLVLMRFVSFLDSGRKSCAIGSEFKVNSSRDSDAAFGLDHQGGMPSILQSMVSTLYFAENNIVQARRNGYSIVMTTSLSSDVPFGYFSWAEYDIMAPVQAKNESALAAAFIFAVGLTQRQALYTLRFQGDSDLRKHVEDNPCAKFEAIFI | 225 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 2598170 | 2601884 | - | CmoCh04G005230.1 | Cmo04g00523 | 379498 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g00523 | 225 | PANTHER | FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED | 14 | 191 | - | - | |
| Cmo04g00523 | 225 | PANTHER | ALPHA- 1,3 -FUCOSYLTRANSFERASE | 14 | 191 | IPR001503 | GO:0006486|GO:0008417|GO:0016020 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo16g00380 | Cmo-Chr16:1749715 | Cmo04g00523 | Cmo-Chr4:2598170 | 2.57E-17 | wgd | |
| Cmo19g00620 | Cmo-Chr19:6797917 | Cmo04g00523 | Cmo-Chr4:2598170 | 4.98E-11 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g00523 | K00753 | - | csv:101202837 | 236.498 |