Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00571 ATGGAGTTCCAAGAAGGAAGGTCGCTGGCCGAGACGCCGACCTACTCGGTTGCTTCTGTGGTTACTGTCATGGTCTTTGTCTGCTTTGTGGTGGAGCGGGCAATCTATAGATTTGGAAAGTGGTTGAAGAAGACAAAGAGAAAGGCTCTGTTTGCTTCTCTGGAGAAGATCAAGGAAGAGCTGATGCTGCTTGGACTAATATCTTTGATGCTGGCACAATGTGCAAGGTGGATCTCCGAAATTTGTGTGAACTCATCCCTTTTCACCAGTAGATTCTACATTTGTTCGGAAGAAGATTATGCCACCAATGAACACGTTATGGTTGAAAGTTCTCTTTTATCTTCTAATGAAATTGGCATTCGGCGTAGAGGATTAAGTTCTCTCCCTCATCAATGTGGCGAGGGTCGCGAGCCTTTTGTTTCATATGAGGGACTCGAACAACTCCATCGCTTCTTATTTGTTCTTGGGATCACTCATGTTCTTTATAGTTGTCTGGCTGTTGGTCTGGCAATGAGTAAGATTTACAGTTGGAAGAAATGGGAAAATCAAATTAGATTATCTGCTGAAGAAAATTGGCCAGCTAAAAAATATAAGGTGATGAGGCGGCAAACGACATTTGTATTCCATCACACATCTCATCCATGGAGCAGGAATCCTATTCTCATATGGATGTTCAAGAGTTCGATAAGGAAATCAGACTACTTGGCCCTCCGCTTGGGATTCATTACAGTAGACATAGAAGTTTCAAACTTTATTTTGAGCCACCTGATATGTGGGACTAGGCGATTTAAGGACAACACAATTTATAAAATTAAGTTATCTGCTTCAATACGTGTCATTTTTACATCCTGCTCCGATAACACCCAGAAGCACAAACTACCAATTTCTTATGACTTCCACAAGTACATGGTTCGGAGCATGGAAGACGAGTTCCATGGAATCCTTGGAATTAGCTACCCACTATGGGGCTACGCCATTCTTTGCATCTTTGTTAACATTCACGTCTCCTCTTTGGCACTTGAAATTCTGGCACAAACGGGTCCAGCAGCAATTGGGACCCAAATAAAGCCAAGAGATGATCTCTTTTGGTTTGGAAAGCCTGAGATATTATTACGTGTTCTTGTTCAGTTTTGGTGCAGCTACAGCACAGTGCCACTTAATGTAATTGTTACACAGATGGGATCCAAGTGTAAGAAAGCATTGGTGGCTGAGAGTGTGAGAGAGTCACTGCATAGTTGGTGCAAGAGAGTAAAGGAGAGGTCCAAACGTGACTCTGTACACTCTGTCACTACAAGATCAATATGTTCACTTGAATCATTGGTTGATGAGCGAGATGAAATAACCGTTGCGTCGGGTACATTGTCAAGAAGCACATCTTTCGACACGTTGAATCAGGTGACGATACAATCTTCTACACAACTGGAGGCCATTATTGAGTCTTCAAGCTTACGGATGCATGAACTTCCCCCCAATATGGCGGATTATCTATCACAATCTGCAAGTGTTTCTCATGCTCCTGCGAATGGCCATGAAAATAATGCAGAAGGTGGAGAAGATAGCAAGGTTGACTCACTTTTCGACTTCCTGAACAGGTGCACGCCCACGTTCGACGCCGTCCTCAGTGATCGCCTGAGGAAGGAAGTGTCGTTGATGGGGCTGAAAACTACAATGGTGGTGCTGGCCATTTTGCTACTTGGAATGGACTGA 1707 43.59 MEFQEGRSLAETPTYSVASVVTVMVFVCFVVERAIYRFGKWLKKTKRKALFASLEKIKEELMLLGLISLMLAQCARWISEICVNSSLFTSRFYICSEEDYATNEHVMVESSLLSSNEIGIRRRGLSSLPHQCGEGREPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWKKWENQIRLSAEENWPAKKYKVMRRQTTFVFHHTSHPWSRNPILIWMFKSSIRKSDYLALRLGFITVDIEVSNFILSHLICGTRRFKDNTIYKIKLSASIRVIFTSCSDNTQKHKLPISYDFHKYMVRSMEDEFHGILGISYPLWGYAILCIFVNIHVSSLALEILAQTGPAAIGTQIKPRDDLFWFGKPEILLRVLVQFWCSYSTVPLNVIVTQMGSKCKKALVAESVRESLHSWCKRVKERSKRDSVHSVTTRSICSLESLVDERDEITVASGTLSRSTSFDTLNQVTIQSSTQLEAIIESSSLRMHELPPNMADYLSQSASVSHAPANGHENNAEGGEDSKVDSLFDFLNRCTPTFDAVLSDRLRKEVSLMGLKTTMVVLAILLLGMD 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2840255 2846621 - CmoCh04G005710.1 Cmo04g00571 379546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00571 568 PANTHER MLO-LIKE PROTEIN 4 4 243 - -
Cmo04g00571 568 Pfam Mlo family 370 432 IPR004326 GO:0006952|GO:0016021
Cmo04g00571 568 Pfam Mlo family 7 247 IPR004326 GO:0006952|GO:0016021
Cmo04g00571 568 Pfam Mlo family 290 336 IPR004326 GO:0006952|GO:0016021
Cmo04g00571 568 PANTHER MLO-LIKE PROTEIN 4 251 373 - -
Cmo04g00571 568 PANTHER MLO-LIKE PROTEIN 4 373 505 - -
Cmo04g00571 568 PANTHER MLO-LIKE PROTEIN 1 251 373 IPR004326 GO:0006952|GO:0016021
Cmo04g00571 568 PANTHER MLO-LIKE PROTEIN 1 373 505 IPR004326 GO:0006952|GO:0016021
Cmo04g00571 568 PANTHER MLO-LIKE PROTEIN 1 4 243 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00571 Cmo-Chr4:2840255 Cmo16g01287 Cmo-Chr16:9165797 4.64E-103 dispersed
Cmo04g00571 Cmo-Chr4:2840255 Cmo01g01256 Cmo-Chr1:10073076 1.30E-102 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00571 K08472 - csv:101204236 760.755