Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00575 | ATGGGCAAAGGGCCATTTTCTTTTCGCCGGAGTAATAGTCGTCGCCGCCCTAAGAAGGCAGCTCAGTCGACACCGTTGTTGTCGCCTCAGACACCTCTGCCGATTGACGTCAATTCTCCTCCCATTAACAATAATGGCAGCAGCTTGGTCGGTGGTGGCGGTGGTGGTGGTGGGGCTGTGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCGAAGCTGTGGATGCGTCTCGACAGATGGGGGCAGTCGGAGCTTTTAGAGTGGGACAAGAACGCAATAATCCGGCGTGCTGCAATTCCGGCTCGGGATTTGAGGATTCTTGGTCCTGTTTTCTCCCACTCCTCCAACATACTCGCAAGGGAAAAGGCCATGGTTGTTAATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTACTATTTGACCCTCTTCGCCAAGAGGTTATTCCATTTGTGGATCAGCTAAGGAAACTACTTGCTACGAAGAGTTCATCTCAGGGCCATGGAGATGGAACTGTGGATGAACGTGAAAATGATGTGAATGTTTCAAGTGGAGGAAAGTGGTTGCCAGTCTCCGAAGCTGCTGAAGCTGCTGAAGGTGTGCCGTATGAGCTCCCGTTTGAGTTTCAGGTTCTGGAAAATGCATTGGAGGTTGTATGTATGTATTTAGATTCCAGTGTGGAAGACCTTGAGAGAGATGCTTATCCAGTGCTTGATGAACTGGCTAGGAATGTCAGCACCAAGAATTTAGAACGTGTGAGAAGCTTGAAAAGTAATCTTACCCGTATTCTTGCACGCGTTCAAAAGGTGCGGGACGAGATAGAGCATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGAATCAACAAGCTGATGCTTTGCTGGGAGGTCTGGCTTCCAACAGCACCACAGCCATCGTTCCCCATCTTCGTCGACTTAGTTCCACCCGGAGCGGAAGTATGGTGACCAGCAATCTTCTTGATGATAATGATGTAGAGGATCTGGAAATGTTACTCGAGGCATATTTTATGCAGTTAGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGATGACACCGAGGATTATGTCAATATTCAACTTGACAACCAACGAAATGAACTCATTCAGTTTCAGTTGACACTGACCATTGCTTCATTCGCCATAGCCATTGAAACCTTAATCGCCGGGTTGTTTGGCATGAACATCCATTGTACATTGTACGATCGGGAGGGGATATTCGAGTACTTCGTCGGAGGTACTTCAGTAGGTTGTTTGTTGATTTTCGTGCTTATTTTCGGGTATGCTAAATGGAAGAAGCTTCTCGGTTCATGA | 1371 | 46.46 | MGKGPFSFRRSNSRRRPKKAAQSTPLLSPQTPLPIDVNSPPINNNGSSLVGGGGGGGGAVGKVKKKAGGAKLWMRLDRWGQSELLEWDKNAIIRRAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLFDPLRQEVIPFVDQLRKLLATKSSSQGHGDGTVDERENDVNVSSGGKWLPVSEAAEAAEGVPYELPFEFQVLENALEVVCMYLDSSVEDLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQADALLGGLASNSTTAIVPHLRRLSSTRSGSMVTSNLLDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAIAIETLIAGLFGMNIHCTLYDREGIFEYFVGGTSVGCLLIFVLIFGYAKWKKLLGS | 456 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2868516 | 2874235 | + | CmoCh04G005750.1 | Cmo04g00575 | 379550 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00575 | 456 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Cmo04g00575 | 456 | PANTHER | MAGNESIUM TRANSPORTER MRS2-4-RELATED | 5 | 456 | - | - | |
Cmo04g00575 | 456 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 5 | 456 | IPR039204 | - | |
Cmo04g00575 | 456 | Coils | Coil | 254 | 288 | - | - | |
Cmo04g00575 | 456 | Gene3D | Magnesium transport protein CorA, transmembrane region | 176 | 387 | - | - | |
Cmo04g00575 | 456 | CDD | Mrs2_Mfm1p-like | 73 | 453 | IPR039204 | - | |
Cmo04g00575 | 456 | Gene3D | Magnesium transport protein CorA, transmembrane region | 394 | 454 | - | - | |
Cmo04g00575 | 456 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 392 | 443 | IPR045863 | - | |
Cmo04g00575 | 456 | MobiDBLite | consensus disorder prediction | 23 | 50 | - | - | |
Cmo04g00575 | 456 | Pfam | CorA-like Mg2+ transporter protein | 256 | 447 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
Cmo04g00575 | 456 | Gene3D | - | 61 | 144 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00575 | Cmo-Chr4:2868516 | Cmo17g00183 | Cmo-Chr17:1083418 | 5.48E-107 | dispersed | |
Cmo13g00275 | Cmo-Chr13:2237131 | Cmo04g00575 | Cmo-Chr4:2868516 | 1.17E-20 | dispersed | |
Cmo16g00423 | Cmo-Chr16:1976093 | Cmo04g00575 | Cmo-Chr4:2868516 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00575 | K16075 | - | csv:101203496 | 700.279 |