Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00576 ATGTTACAGGCAAAGGAATTTCTCGAATTTTATACCATGGCAACTTCAAAAGGGTCATCCAACGTCAGAAATTTTATGAGTTCTGGAAAACATGCACTACTCCCTCCTAAAAGTCCTTTCCCTAGTGTTTCTCCATCATATACTGAATATGTTCCCAATACTGCAATTGGAGCAAAAGCTGTTCAGAGACCAAGAGATGGTAACAGCTACCATCAAAGAACTTCTTCTGAAAGCTTTCTAATAGAGGAGCAGCCTTCTTGGCTTGAAGATCTTCTTAATGAGCCGGAGACCCCTGTTCGCAGAGTTGGTCATCGACGTTCATCAAGTGACTCCTTTGCATATACAGATTCTGCTAATGCTAATTTTGATAGTATCGTGCAAGAAGACTTCAAATATACAAATTCTATTCCTGGACACTCTTGGTTATCTCAAGAATTTGATCGTCAGAGAGATGCAAGGCATGCTTCATTTTATACTGAAGCGAATGTGACAAAGCAGAAGAATAGGGTGTGGGAATCATCTTTGTCTGCCATGAATAATCCCATGGCTCTTCGTTCTCCCAGGGAGAACATTGTTGTTCATACCTCGGGACCATTGATCCCTCCGCAGGAGGCAGATGGTTTGCTTTCTACAGAAAGTGAAAAACAGGATCCAACTGAGTCTGGTCCACACGATCCAAAAATCTCTTCTGAAAGGAAAGACATGTCTCATGGAAAATCATCCGGGTCGGATACCGAAAATAAACGTGCCAAACAGCAATTTGCTCAGCGTTCAAGGGTTCGGAAACTTCAATATATAGCTGAGCTTGAAAGGAAAGTACAAGCTTTGCAGGCAGAGGGCTCTGACGTCTCAGCTGAGCTTGAATTTCTCAACCAGCAAAATATTATTCTTAGCATGGAGAACAAATCCCTCAAGCAGCGGTTAGAGAGTTTAGCTCAAGAGCAGCTAATTAAATACTTGGAGCAGGAAGTACTGGAGAGGGAGATTGGAAGGTTAAGAGCTGTGCATCAGCAGCAACAACTGCAACAACTACGGCCTTCTTCTAGTCATCGGCGTACTTCAAGCAAAGACCTTGACAGTCAATTTGCAAATCTTTCTTTGAAGCAAAAGGATTCTGGTTCAAGTTGTGACCCAGTAACAGGTCCAGTGCGCAGTTAG 1158 42.75 MLQAKEFLEFYTMATSKGSSNVRNFMSSGKHALLPPKSPFPSVSPSYTEYVPNTAIGAKAVQRPRDGNSYHQRTSSESFLIEEQPSWLEDLLNEPETPVRRVGHRRSSSDSFAYTDSANANFDSIVQEDFKYTNSIPGHSWLSQEFDRQRDARHASFYTEANVTKQKNRVWESSLSAMNNPMALRSPRENIVVHTSGPLIPPQEADGLLSTESEKQDPTESGPHDPKISSERKDMSHGKSSGSDTENKRAKQQFAQRSRVRKLQYIAELERKVQALQAEGSDVSAELEFLNQQNIILSMENKSLKQRLESLAQEQLIKYLEQEVLEREIGRLRAVHQQQQLQQLRPSSSHRRTSSKDLDSQFANLSLKQKDSGSSCDPVTGPVRS 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2876910 2880917 + CmoCh04G005760.1 Cmo04g00576 379551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00576 385 Coils Coil 259 314 - -
Cmo04g00576 385 Gene3D - 246 300 - -
Cmo04g00576 385 MobiDBLite consensus disorder prediction 340 360 - -
Cmo04g00576 385 PANTHER - 13 373 - -
Cmo04g00576 385 MobiDBLite consensus disorder prediction 194 256 - -
Cmo04g00576 385 CDD bZIP_plant_RF2 248 295 IPR044759 GO:0003700|GO:0006355
Cmo04g00576 385 SMART brlzneu 244 303 IPR004827 GO:0003700|GO:0006355
Cmo04g00576 385 SUPERFAMILY Leucine zipper domain 255 297 IPR046347 GO:0003700|GO:0006355
Cmo04g00576 385 MobiDBLite consensus disorder prediction 210 253 - -
Cmo04g00576 385 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 13 373 IPR044797 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00576 Cmo16g00423 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00576 Cmo-Chr4:2876910 Cmo04g01948 Cmo-Chr4:9969248 1.34E-107 dispersed
Cmo04g00576 Cmo-Chr4:2876910 Cmo16g00423 Cmo-Chr16:1976093 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00576 - - cmax:111480298 719.539