Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00583 | ATGGGTTGCGTTTGTTGTAAGCCCTCTGCTATAGAGGATAGCAAGGAAAGTCCGAGGGAGAGGCTGTCGAACAAGACCTCGTCCGACCTGCAGGTGGCAAGAGTGACTTCGTCGTCGAGGGAAGAAGCTTATCGATCTAAAGATCATCATGATGGTAATGATGTAAGAGTGACATTGATTAACAAGCAGGTGAATGGGTCGGGTCGATTGCAGAGTGAGATTTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGCTGCTCAACATCCTTCAATGGGGAGAATTCCGAAGGCAGCAGAGGGAGACCAAATTGCTGCAGGCTGGCCGCCGTGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGGTGGCTACCCCGACGAGCTGATTCTTTTGAGAAATTGGATAAAATTGGTCAAGGGACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATTGTTGCTTTGAAGAAAGTAAGATTCGACAACCTGGAACCTGAGAGCGTCCGCTTTATGGCTAGGGAAATTCACATATTGCGTAGGCTCGATCATCCAAATGTGATAAAGCTGGAGGGTCTAGTTACGTCAAGGATGTCTTGCAGCCTCTATCTTGTATTTGAGTACATGGAACACGATTTGGCAGGACTTGCTTCACACCCTGGTGTGAAGTTTACAGAGGCACAGGTTAAATGTTACATGCAACAACTTTTGCGTGGACTTGATCATTGTCACAGTCACGGAGTTCTGCATCGTGATATAAAGGGTTCCAACCTTTTAATCGACAATAATGGCGTCTTGAAAATTGCAGACTTTGGTTTAGCAAGTTTTTTTGATATCCACCAAAATCAGCCGCTGACAAGTCGGGTTGTAACTCTTTGGTATAGACCGCCTGAGCTTTTACTCGGTGCTACTTATTACGGTACAGCTGTAGATTTGTGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGGTGGAGCAGCTACATAAAATATTTAAACTCTGTGGCTCTCCTTCAGAGGATTATTGGAGAAAATCAAGGCTGCCACATGCAACGATATTTAAGCCCCAACAGCCCTATAGACGCTGCGTTGCTGACACGTTTAAGGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGATGTTACTCTCTATAGATCCTGCTGATCGTGGCTCTGCCGCTCTTTCCCTTAAAAGCGAATTTTTTTCAACGAAGCCACTTCCTTGTGATCCTTCGAGCTTGCCAAAGTATCCTCCGAGCAAAGAATTTGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCGGTAGGAAGCAAGGGACACCGACATGACCTGCAAAGGAAAGATAGAGAGTCTCGAGCTGTCCCTGCACCTGACGCCAATGCCGAGTTAGTCTCATCAATGCAGAAAAGACAATCCAATTCAAAGAGCCGGAGTGAAAAGTTTAATCCACACCCAGAAGAAGCTTCTGGCTTTCCAATTGATCCACCTAGACCATCACAAGGAGCAGAACGAACGGATTCTCAGGTGTGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCCGCTTGGGTAAAGGCTAGTAAGAACCCAGATGACGCTCCGAAAATCTCAACCGGGGCCGATACGTTCACAACTTCAGGACTAGTAGCACCTAGAAGAAGTATGCTGGGGGAGAAGTCTGACGCTTCACAAGGAGAGGTTAAAAAACTAATTGGCAGGTTTCCTGGTTCCTTCAAGGAAACCTCGGAATCATCGATGCTACCCGACCAGAAGTTCTCAAATCACAGTATCGTAGGCTCACACGACAAAGAGAGGTGCAGCACCAAAGACCCTATAGTTGTGGGTTATGGCTCAAAAGGTCATAAGATTCATTACTCTGGTCCATTACTGGTTCCTTCTGGCAACATGGACCAAATGTTGAAGGACCACGATCGTCATATCCAAGAAGCAGTAAGACGAGCTCGGCTCGACAAGGCCAAGGCACGAAAGGTTCAAGTTGACGGGAAACAGATGTCGACAAATTCATTATTCGTCTCTGGTCGTTAA | 2106 | 46.72 | MGCVCCKPSAIEDSKESPRERLSNKTSSDLQVARVTSSSREEAYRSKDHHDGNDVRVTLINKQVNGSGRLQSEIFERKREKMEHMAAQHPSMGRIPKAAEGDQIAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDIHQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIEMLLSIDPADRGSAALSLKSEFFSTKPLPCDPSSLPKYPPSKEFDAKIRDEEARRQGAVGSKGHRHDLQRKDRESRAVPAPDANAELVSSMQKRQSNSKSRSEKFNPHPEEASGFPIDPPRPSQGAERTDSQVCHPKKASHSGPLAQRAAWVKASKNPDDAPKISTGADTFTTSGLVAPRRSMLGEKSDASQGEVKKLIGRFPGSFKETSESSMLPDQKFSNHSIVGSHDKERCSTKDPIVVGYGSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKAKARKVQVDGKQMSTNSLFVSGR | 701 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 2911153 | 2916800 | + | CmoCh04G005830.1 | Cmo04g00583 | 379558 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00583 | 701 | SMART | serkin_6 | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00583 | 701 | MobiDBLite | consensus disorder prediction | 445 | 537 | - | - | |
Cmo04g00583 | 701 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 683 | - | - | |
Cmo04g00583 | 701 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00583 | 701 | SUPERFAMILY | Protein kinase-like (PK-like) | 125 | 423 | IPR011009 | - | |
Cmo04g00583 | 701 | Gene3D | Transferase(Phosphotransferase) domain 1 | 214 | 454 | - | - | |
Cmo04g00583 | 701 | MobiDBLite | consensus disorder prediction | 8 | 52 | - | - | |
Cmo04g00583 | 701 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 213 | - | - | |
Cmo04g00583 | 701 | CDD | STKc_CDK9_like | 131 | 415 | - | - | |
Cmo04g00583 | 701 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524 | |
Cmo04g00583 | 701 | PANTHER | CYCLIN-DEPENDENT KINASE | 1 | 683 | - | - | |
Cmo04g00583 | 701 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00583 | 701 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo04g00583 | 701 | MobiDBLite | consensus disorder prediction | 445 | 471 | - | - | |
Cmo04g00583 | 701 | MobiDBLite | consensus disorder prediction | 24 | 39 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g00583 | Cmo16g00430 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00886 | Cmo-Chr1:4835903 | Cmo04g00583 | Cmo-Chr4:2911153 | 0 | dispersed | |
Cmo02g00098 | Cmo-Chr2:523545 | Cmo04g00583 | Cmo-Chr4:2911153 | 0 | dispersed | |
Cmo04g00583 | Cmo-Chr4:2911153 | Cmo20g00222 | Cmo-Chr20:1063611 | 6.74E-144 | dispersed | |
Cmo18g00235 | Cmo-Chr18:1536998 | Cmo04g00583 | Cmo-Chr4:2911153 | 0 | dispersed | |
Cmo20g00223 | Cmo-Chr20:1073241 | Cmo04g00583 | Cmo-Chr4:2911153 | 7.11E-09 | dispersed | |
Cmo04g02055 | Cmo-Chr4:11482638 | Cmo04g00583 | Cmo-Chr4:2911153 | 0 | transposed | |
Cmo06g00920 | Cmo-Chr6:6618306 | Cmo04g00583 | Cmo-Chr4:2911153 | 0 | transposed | |
Cmo16g00430 | Cmo-Chr16:2044031 | Cmo04g00583 | Cmo-Chr4:2911153 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74237 | PF00069 | Pkinase | 1.90E-68 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00583 | - | - | csv:101222182 | 1323.92 |