Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00635 ATGAGTTGTCGAACCAACAAACAGAATTCGAACCCATTTCATTCCGCCATTGCTGACTTTTCCTGTTCCAGGAAGAAGATGGGCAGTGAAAATTTTGGTTTATGGCTATTTTTTATTGCATCTCTTCAGTTTTTTATTAGAACACAGTGTACTATTGTGGGGATTACTTATGTTCGTGAACCTAGTGTCAAAGGAGCTGTTTGTTTGGATGGAAGCCCTCCAGCTTATCACTTGAGTGAAGGGTTAGGCGCTGGTGTTAACAATTGGTTGATTCAGCTAGAGGGAGGAGGATGGTGCAGCGATGTCAAGACTTGCGTCCTGCGTCGGGATACTCGTTTAGGTTCGTCTAAGGCCATGGCTACCGAGCTTGCGTTTTCGGGGCTTTTGAGTAACCAACGAGAATTCAATCCAGATTTTTATAACTGGAATAGAATCAAAATTCGATACTGCGATGGATCTTCGTTCACCGGAGACGTCGAAGCCGTTGATCCCGCAACCAATCTGCATTTCAGAGGAGCAAGAATTTTTCGGGCCGTGATCGATGATTTACTCGCCAAGGGAATGAAGAACGCGAAGAACGCTATTATCTCGGGATGTTCGGCCGGTGGATTAGGTTCCATTTTGCATTGTGATACCTTCAAATCTTTACTTCCTCCTACTACCAAAGTAAAGTGTGTCTCAGATGCAGGATACTTCGTCAACGTGAAAGATGTCTCTGGAGCACGGCATATCGAGGAGTTCTTTAGCGATATAGTCGCCACTCATGGTTCAGCTAGGAATTTGCCTGTACAATGCACTTCAAAAATGAAACCCGAGTTGTGTTTCTTCCCCCAAAATGTGATTCAGCTCGTTCGGACTCCAATCTTTATTGTAAATGCAGCTTATGATTCATGGCAGGTAAGGAACATTCTGGTGCCCGGTGTTGCCGATCCACGCCATATTTGGAATGACTGCAAGAACGACATCAAAAACTGCTCGTCTATTCAGCTTGAAACCTTACAAGATTTCAGGGATAAGTTTTTGAATGCATTGAATGGCTTTGGACACCCTTCATCAAGAGGATTGTTCATAGATTCTTGCTATGCGCATTGCCAAACTGAAATGCAGGAGACATGGCTAAGAGCAGACTCTCCCGAGATCAGTAACACGCCCATTGCAAAGGCGATTGGAGACTGGTTTTTCGACAGGAGTGTGTTCCAGAAGATCGATTGTCCATACCCGTGTAACCCGACATGCCATAACCGCATTTTTTAA 1254 44.5 MSCRTNKQNSNPFHSAIADFSCSRKKMGSENFGLWLFFIASLQFFIRTQCTIVGITYVREPSVKGAVCLDGSPPAYHLSEGLGAGVNNWLIQLEGGGWCSDVKTCVLRRDTRLGSSKAMATELAFSGLLSNQREFNPDFYNWNRIKIRYCDGSSFTGDVEAVDPATNLHFRGARIFRAVIDDLLAKGMKNAKNAIISGCSAGGLGSILHCDTFKSLLPPTTKVKCVSDAGYFVNVKDVSGARHIEEFFSDIVATHGSARNLPVQCTSKMKPELCFFPQNVIQLVRTPIFIVNAAYDSWQVRNILVPGVADPRHIWNDCKNDIKNCSSIQLETLQDFRDKFLNALNGFGHPSSRGLFIDSCYAHCQTEMQETWLRADSPEISNTPIAKAIGDWFFDRSVFQKIDCPYPCNPTCHNRIF 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3142756 3145965 + CmoCh04G006350.1 Cmo04g00635 379610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00635 417 PANTHER PECTIN ACETYLESTERASE 7 35 414 - -
Cmo04g00635 417 Pfam Pectinacetylesterase 50 398 IPR004963 GO:0016787
Cmo04g00635 417 PANTHER NOTUM-RELATED 35 414 IPR004963 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00635 Cmo-Chr4:3142756 Cmo16g00130 Cmo-Chr16:605501 1.20E-131 dispersed
Cmo10g01271 Cmo-Chr10:13091989 Cmo04g00635 Cmo-Chr4:3142756 1.95E-151 transposed
Cmo11g01255 Cmo-Chr11:7951868 Cmo04g00635 Cmo-Chr4:3142756 3.33E-151 transposed
Cmo16g00560 Cmo-Chr16:2729529 Cmo04g00635 Cmo-Chr4:3142756 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00635 K19882 - csv:101214431 692.96