Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00649 ATGGTGTTGGGTAGATTTAGGGATGTTTTCTCGTCTGTAGCCAGTCGTTTGTCGGGCCGACAGTCTTCTACGGATGCGTTTAAATCATCGTCGCCTCCGTTGATCGATTCTTCGCCTCCTCTTGTTGCTGGATTTTCAAGTCCTGCGCTTAAGAACAATATAAGGCTTTCATCGTCTCTTCAGGATCTCTCTGCTTACCGTAGACTTGATCTCGAAGAGGGTAATCATGGACTTGGGAATGCAGCTTCTGATTTTAGACCGCTCCAGCGAGAGAATGCTGGCTCTAGTTTCTCGAAGGAGAAGGCATTGCCTGGAGGCTCCTCCCGGTGGCCGATCAAGAAGTTGGTGCGAACAATTGTTCTTTTTCTGTGTCTTTTGCTCGTTTGTTTTCTAATTTATACGGTTTCTATGTATATTTATTCATATTGGTCTCAAGGAACACCAAGATACTTTGTGGTGCTTGACTGTGGAAGTACTGGCACTCGAGCTTATGTATATCAAGCAAATATTAATTATAAGAAAGATGGAGCCCTTCCCTTTGCCATCAGGTCATATACAGGACAGAAGAAGAAATCGAAGTCTCAGAGCGGACGGGCTTATGATCGAATGGAAACAGAACCAGGGCTTGATAAGTTGGTTCGTAATGTGACTGGTTTGAAGAAAGCAATTAAACCTCTGCTTCATTGGGCTGAGAAGCAGATTCCTAAGCGTGCCCATGAAAGCACTTCTCTTTTCCTCTATGCGACCGCTGGAGTTAGAAAACTACCACCTGCAGATTCGAAATGGATTCTGGACAATGCTTGGTCTATATTAAAGAGTTCACGCTTTCTTTGCCAGAGAGAATGGGTTAAAACCATTACAGGTACAGAAGAGGCTTACTATGGATGGATTGCCCTTAACTATCAAAAACAATTGTTGGGGGTTAAACCAAGGGAACTAACATATGGGGCACTTGATTTGGGAGGGTCTTCCTTGCAAGTAACTTTTGAAAGCAAGGAACGAAATGAGTCGAGTTTGAACATTAGAATTGGAAATGTTGATTATCATCTTAATGCTTATTCGCTTACCGGCTATGGTTTAAATGATGCATTTGGGAAGTCTGTTGTCCATCTATTAAGAAGGATTCAAGAACATGAAAAGCTAGACCTGTCTAAATTTAAGCTTAACCACCCTTGCCTGCATTCTGGGTACAATGAGAAGTATACCTGTAACCAGTGTGGAAAATTGTTGGGTAGAGGAGGTAATTCAGGAATTTCTCTAAGGCTGATTGGTGCTCCGAATTGGGAAGAATGTTCTGCACTTGCTAAAGTTGCAGTAAATTTTTCCGAATGGTCAAATACGAGCACTGGACTAGATTGTGATGTGCAACCATGTGCCATAACTAATGACTACCCTCCACCATATGGGAATTTTTATGCCATTTCTGGTTTCTTCGTGGTGTTTCGATTTTTCAATCTGACTTCAGAGGCTACACTTGATGATGTATTAGAAAAGGGTCGCAAATTTTGTGAGAAACCTTGGGAAGTTGCACGGGCTAGTGTTGCTCCACAGCCCTTTATTGAGCAATACTGCTTTAGGGCACCATATGTAGTCTCGCTCCTTAGAGAGGGGTTGCATATTACTGATAAACAAATTATTATTGGTTCGGGGAGTACAACTTGGACTCTCGGGGTTTCGCTGTTGGAGGCGGGGAAAACGTCTGCAGTTACAACCAGGCTACAGCTCCATGGTTATAAAATTTTTAAAATGAAGATAGATCCTCTAATTCTTATCGTCGTTTTGTTCACGTCATTGTTTTTCCTGCTTTTTGCATTATCCTGTGTAGGTAGTGCAATACCTAGATTTTTTCGGAGACCCTATCTCCCAATTTTCCGGCATAGTACTGTCTCTACCACATCTGTTCTAAACATTCCATCTCCTTTTCGGTTACAGCGGTGGAGTCCAATGAGTTCTGGGGATGGCAGAGTGAAGATGCCACTGAGTCCAACAGTTAAAGGCTCTCAAGAAAGACCCTTCGGCTTAGGACATGGCTTTGGCAGCAGTAGCGGCATCCAACTTATGGAGACATCCTTGCACCGGTCATCCAGCAGTATGGTCTCGCATAGCTATTCTTCAAATAGTCTTGGCCAAATGCAATTTGACAATAACAGCGTCGGTTCGTTCTGGACCCCACGTCGTAGTCAGATGCGCCTTCAAAGTAGACGTTCGCAATCTCGAGAGGATCTGTCATTGACGTCGGCTGAAACACACATGGTGAAGGTTTAG 2265 43.44 MVLGRFRDVFSSVASRLSGRQSSTDAFKSSSPPLIDSSPPLVAGFSSPALKNNIRLSSSLQDLSAYRRLDLEEGNHGLGNAASDFRPLQRENAGSSFSKEKALPGGSSRWPIKKLVRTIVLFLCLLLVCFLIYTVSMYIYSYWSQGTPRYFVVLDCGSTGTRAYVYQANINYKKDGALPFAIRSYTGQKKKSKSQSGRAYDRMETEPGLDKLVRNVTGLKKAIKPLLHWAEKQIPKRAHESTSLFLYATAGVRKLPPADSKWILDNAWSILKSSRFLCQREWVKTITGTEEAYYGWIALNYQKQLLGVKPRELTYGALDLGGSSLQVTFESKERNESSLNIRIGNVDYHLNAYSLTGYGLNDAFGKSVVHLLRRIQEHEKLDLSKFKLNHPCLHSGYNEKYTCNQCGKLLGRGGNSGISLRLIGAPNWEECSALAKVAVNFSEWSNTSTGLDCDVQPCAITNDYPPPYGNFYAISGFFVVFRFFNLTSEATLDDVLEKGRKFCEKPWEVARASVAPQPFIEQYCFRAPYVVSLLREGLHITDKQIIIGSGSTTWTLGVSLLEAGKTSAVTTRLQLHGYKIFKMKIDPLILIVVLFTSLFFLLFALSCVGSAIPRFFRRPYLPIFRHSTVSTTSVLNIPSPFRLQRWSPMSSGDGRVKMPLSPTVKGSQERPFGLGHGFGSSSGIQLMETSLHRSSSSMVSHSYSSNSLGQMQFDNNSVGSFWTPRRSQMRLQSRRSQSREDLSLTSAETHMVKV 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3219653 3222858 + CmoCh04G006490.1 Cmo04g00649 379624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00649 754 MobiDBLite consensus disorder prediction 724 754 - -
Cmo04g00649 754 PANTHER APYRASE 7-RELATED 82 712 - -
Cmo04g00649 754 Pfam GDA1/CD39 (nucleoside phosphatase) family 148 563 IPR000407 GO:0016787
Cmo04g00649 754 Gene3D - 141 288 - -
Cmo04g00649 754 Gene3D Exopolyphosphatase. Domain 2 289 548 - -
Cmo04g00649 754 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 82 712 IPR000407 GO:0016787
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00649 Cmo-Chr4:3219653 Cmo05g00866 Cmo-Chr5:5657289 4.83E-37 dispersed
Cmo01g00508 Cmo-Chr1:2451235 Cmo04g00649 Cmo-Chr4:3219653 8.29E-41 transposed
Cmo13g00908 Cmo-Chr13:8057496 Cmo04g00649 Cmo-Chr4:3219653 7.82E-93 transposed
Cmo16g00549 Cmo-Chr16:2647835 Cmo04g00649 Cmo-Chr4:3219653 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00649 - - csv:101219987 1261.13