Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00652 ATGGTAATGGCGGCCAGTTCCCTATCGAATCTGCCTTCCGCTGTCTTCAATGGAAACCTTCAGAAAAATGAATTTGGGTTTGTGGGTATGCCGCGACGACCCGCCAAGTATCTCAAATCCAATCGTAGAGCTCGTGTTCTTAGATGCCAATCAACTCAAGTTGATGAACCTAAAACTAAGAGAAATTTACTTGACAATGCAAGCAATCTTCTAACTAATTTGTTAAACGGTGGAAATCTTGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTTGGTCGCCCACTCTTTTTTGCACTATATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCGGATCCTATTGTGGCAAGATATATTCTTCGAGAAAATGCATTTAGTTATGATAAGGGAGTGCTTGCTGATATTCTAGAACCCATAATGGGTAAAGGACTAATACCAGCTGACTTAGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCGTTATACTTGGAAGCTATGGCCAAAGTGTTCGCTGATTGTTCAGAACGATCGATACGGAAATTAGAGAAGCTTTTAGGAGAAGGTGAAGTTCATGAGGATAAAACCATTGAGTTGGATATGGAAGCAGAGTTTTCAAATTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAGGAATCCCCAGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATATTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCGAGGCAACGTAAATTCCATAGTGACCTTAAGGTTATTAACGACTGTCTCGATGGCCTAATACGAAACGCAAGAGAAACCCGAGAGGAAGCGGATGTCGAGAAATTGCAGCAGAGGGACTATTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGTGCTGATGTCGATGATCGGCAGCTCAGGGACGATCTGATGACGATGCTTATTGCTGGCCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAAAGCTCAAGAAGAGGTTGATTTGGTTCTTGGCAAGGGAAGGCCAAATTTTGAATTACTCAAAGAATTGAAGTATATCAGACTTATCGTCGCCGAGACTCTTCGTTTGTTTCCTCAACCACCATTGCTAATAAGACGAGCTCTCAAACCAGATACATTACCAGGAGGATATAATGGTGACAAAAATGGATATCCAATTCCTGCAGGGACTGACATCTTCATCTCTGTTTACAATCTCCATAGATCCCCATACTTCTGGGATAACCCTCGAGATTTCGAACCAGAGAGATTTCAGGTAAACAAAGCGAGCGATGGAATTGAAGGATGGGATGGTTTCGATCCTTCTAGAAGCCCGGGAGCTCTATACCCAAATGAGATTATATCAGACTTTTCCTTCTTGCCATTTGGAGGAGGACCTAGAAAATGTGTGGGAGATCAATTTGCTCTAATGGAGTCAACTATAGCACTGGCCATGTTGCTGCAGAAGTTTGATGTGCAACTAAAAGGAAGTCCAGAATCTGTGGAACTAGTCACTGGGGCTACCATACATACCAAAAGTGGGCTGTGGTGCAAACTGAGAAGAAGATCACAAGTAAATTGA 1743 42.17 MVMAASSLSNLPSAVFNGNLQKNEFGFVGMPRRPAKYLKSNRRARVLRCQSTQVDEPKTKRNLLDNASNLLTNLLNGGNLGSMPIAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMAKVFADCSERSIRKLEKLLGEGEVHEDKTIELDMEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQEEVDLVLGKGRPNFELLKELKYIRLIVAETLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYPIPAGTDIFISVYNLHRSPYFWDNPRDFEPERFQVNKASDGIEGWDGFDPSRSPGALYPNEIISDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVQLKGSPESVELVTGATIHTKSGLWCKLRRRSQVN 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3235812 3242519 + CmoCh04G006520.1 Cmo04g00652 379627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00652 580 Pfam Cytochrome P450 106 566 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 SUPERFAMILY Cytochrome P450 94 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 516 525 IPR017972 GO:0005506|GO:0016705
Cmo04g00652 580 PRINTS P450 superfamily signature 357 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PRINTS P450 superfamily signature 514 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PRINTS P450 superfamily signature 523 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 78 576 - -
Cmo04g00652 580 PANTHER CYTOCHROME P450 FAMILY 4 78 576 - -
Cmo04g00652 580 PRINTS E-class P450 group I signature 106 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PRINTS E-class P450 group I signature 346 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PRINTS E-class P450 group I signature 366 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PRINTS E-class P450 group I signature 513 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 PRINTS E-class P450 group I signature 523 546 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00652 580 Gene3D Cytochrome P450 82 580 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00652 Cmo-Chr4:3235812 Cmo07g00917 Cmo-Chr7:4397355 7.24E-133 dispersed
Cmo04g00652 Cmo-Chr4:3235812 Cmo16g00795 Cmo-Chr16:4035464 4.10E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00652 K24543 - csv:101210292 1058.13