Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00667 | ATGGCGCCAACTAACGGCTACTCTGATTTCTCCCTCTTGCAAAAGGTAGGGGCGGAGTTCATTGGAACATACATAATGCTATTCTCCGCAGCGGCGGCGCCCATTCTGAACGAGAAGTACCAGGCGGCGGAGAACGGCCTGATGACGAGTGCGATATGCGCAGGACTCGCGGTGATGGCCGTAATCCTCTCCATCGGTCACATCTCCGGCGCTCACTTGAATCCCTCCGTCACTGTAGCCTTCGCCGCTCTCCGTCACTTTCCATGGCTTCACGTCCCGCTCTACATCACCGCTCAGATATCCGGATCTATTTCCGCCGCTTTCAGCCTCAAGATCGTCTTCCGTCCGTTCATGTCCGGCGGCGCCACCGTGCCCTCCGTCGGCACCGGTCAGGCCCTCGCGATCGAGTTCATCGTCACATTCTTCCTCATGTTCGTCATTGTTGCTGTCGCCACTGATACCAGAGCGGTCGGGGAATTGGCCGGAATTGCAATCGGAGGCATGGTAATGCTCAACATTCTCGTCGCCGGGCGCGCAACCGGCGGTTCGATGAACCCGGCGAGGACCTTAGGCCCAGCCATCGCAACAGAAAATTTCAAAGGTCTATGGATATACATAGTAGCACCCACAGCCGGAGCAGTGGCTGGTGCAGCCGGCTACACAGCCGTGAAGCTCCGTCAAGACACGGCAGCGGAATCAGCGCGGCGAAATGAAGGAAGCCTCAGCCGATTGGGAGAAAGCTCGCAAGCGGTGGTCCCGTCGAGATCCAGTGGAAACTCGGCATGGAAGCTGGACGGCGGTTCGTGGCTGTGTTTAGCCGGAGAGTGCAGGAAGGAGTGCTCGGAATTGGAGCATCTGAATGTGATTCTGTGTTACAAGGAAGCTAATCAGATCGCAGAATTTCTGGGCAAGAACGAAGCAGGCGACGAGGGTTTGGTATAA | 942 | 56.9 | MAPTNGYSDFSLLQKVGAEFIGTYIMLFSAAAAPILNEKYQAAENGLMTSAICAGLAVMAVILSIGHISGAHLNPSVTVAFAALRHFPWLHVPLYITAQISGSISAAFSLKIVFRPFMSGGATVPSVGTGQALAIEFIVTFFLMFVIVAVATDTRAVGELAGIAIGGMVMLNILVAGRATGGSMNPARTLGPAIATENFKGLWIYIVAPTAGAVAGAAGYTAVKLRQDTAAESARRNEGSLSRLGESSQAVVPSRSSGNSAWKLDGGSWLCLAGECRKECSELEHLNVILCYKEANQIAEFLGKNEAGDEGLV | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3315281 | 3317159 | - | CmoCh04G006670.1 | Cmo04g00667 | 379642 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00667 | 313 | Gene3D | Glycerol uptake facilitator protein. | 4 | 237 | IPR023271 | - | |
Cmo04g00667 | 313 | PANTHER | AQUAPORIN NIP5-1 ISOFORM X1-RELATED | 9 | 232 | - | - | |
Cmo04g00667 | 313 | PRINTS | Major intrinsic protein family signature | 14 | 33 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g00667 | 313 | PRINTS | Major intrinsic protein family signature | 54 | 78 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g00667 | 313 | PRINTS | Major intrinsic protein family signature | 91 | 110 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g00667 | 313 | PRINTS | Major intrinsic protein family signature | 135 | 153 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g00667 | 313 | PRINTS | Major intrinsic protein family signature | 166 | 188 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g00667 | 313 | PRINTS | Major intrinsic protein family signature | 203 | 223 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g00667 | 313 | MobiDBLite | consensus disorder prediction | 234 | 259 | - | - | |
Cmo04g00667 | 313 | PANTHER | AQUAPORIN NIP2-1 | 9 | 232 | IPR034294 | - | |
Cmo04g00667 | 313 | ProSitePatterns | MIP family signature. | 72 | 80 | IPR022357 | - | |
Cmo04g00667 | 313 | Pfam | Major intrinsic protein | 10 | 219 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g00667 | 313 | SUPERFAMILY | Aquaporin-like | 10 | 226 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00667 | Cmo-Chr4:3315281 | Cmo15g01411 | Cmo-Chr15:9615452 | 4.50E-95 | dispersed | |
Cmo04g00667 | Cmo-Chr4:3315281 | Cmo02g00977 | Cmo-Chr2:6022903 | 5.16E-107 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00667 | K09874 | - | dcr:108227578 | 307.375 |