Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00685 | ATGCATGATCAAGATTCCTGTTCCATCCCTGGTGAAGGGAAATCCATGCCCGAATTTACCTCGGCTTCTCTTGATCTATCTATCTCTGCTGGTTCTCCCGATATTCCAGTCAATAACTACTGTGATTCACCAGAAATCTTGGATATTAAGTGTTGTAAACTTATGGAATCTCCCGTAGAGCTTTCCTTTGAAAATAGCTTTACGGGTGTTGAGGTTAGCCATAACCAGATAACCCCATCTGTTAGATTTTCCAATTTGTGTGAAACATATGAGCAAGAACTGTCTCCAGAATCTTCCTTTGAGTTGGCTCCTTCTCCAGCTACCAGTTCTTTTAAATCTGAAGAACTCCTTCAAGCTATAAGTGTCAATGCAGGTGCTCCAAGTGATGCTGTGGATTTGGATGGGATAAACTATGTGGAAGACAATTGGTATAAGGGTGGTGATACCATTAGGTCTGATGAAATTGAGCATCCTCTGTATCAAACGGCTCGTTTTGGGGATTTTTGTTACAATTTCTCATCATTGGAACCTGGGAATTATGTTGTTGACCTGCATTTTGCTGAAATTGTATTTACCAATGGCCCACCTGGTATGAGGGTGTTTGATGTCTATTTGCAAGACCAGAATGTTGTTTCTGGCCTGGATATATATGCTCGTGTCGGTGGGAATAAGCCTCTCATTATATCTGACCTCAAAACTTCTGTCGAAGTAAAAGATTTAACCATTGGATTTGAAGGACAGATGGGCAGGCCAATTGTTTGTGGTATTTCTGTGAGGAAAGATCTCCCTTCAAATAGAAAAGAAGTTGAACTGCTCGAAGAAATGGGATCATCTCAACTATCCAACGGGGAGATGTCCAAAGATAGTGATGACTTGATAGTAAAAGAGAAGTACCTAGTGCTGCAAAAGGATCTTGAGCTCACGAAGAATGAGCTAGCAGCAGCAAGGAAGAACATGGAGGAACTTAGAAAGGAAAACAATCAAAAGAGTAGCGAATGTCAAGAAGCTTGGAAGTCTTTAAATGAGCTGCAAAACGAGCTCATGCGCAAGTCAATGCATGTTGGATCTCTTGCTTTTGCCATTGAGGGACAGGTGAAAGAGAAGGGCAAATGGTTTTCTTCGTTGAGAGACCTTACCAGAAAAGTAAAGATTATGAAAATAGAAAACATCAAATTATCAGAGGAGGCATTGGCTTTCAAGAACTGCTGTGTAGATATGAATGAAATGACTTCTAAAATTCAGACAGCATTTAAACAGCAATTAGATTTGCAAGAAACCCTGAAGACTAAATTTGTTGAAGGAGCTAAGGAACGGAAAGAACTCTACAATAAGATGTTGGAGTTGAAAGGAAACATTAGGGTCTTTTGTAGGTGTAGGCCTTTAAATACAGAAGAGATTGGTTCTGGAGCTTCAATGGTTGTTGATTTTGAGTCGGCCAAAGATGGCGAGTTGATTGTTAAGTCAAATGGGGCTCCCAGAAGAATCTTTAAGTTTGATTCTGTATTTGGTCCTCAGGCAAATCAAGGAGATGTGTTTGAAGATACTGCGCCATTTGCGGCTTCAGTCCTAGATGGTTACAATGTTTGTATATTTGCATATGGCCAAACCGGGACTGGAAAAACTTTTACAATGGAGGGCACTGAGGGAGCTCGTGGAGTCAATTATAGGATTCTTGAGGAGCTGTTTCGCTTGACAAAGGAACGCCAGAAGCTACATCGATACAAAGTATCTGTTAGTGTCTTGGAAGTGTATAATGAGCAAATACGGGACTTGCTAGTCTCAGCATCTCAGTCAGGAAATGGTTCAAAAAGGCTCGAAGTAAGACAAATCAGTGAAGGAATACATCATGTTCCTGGCATGGTAGAGGCACCTGTCGACAACATGAGTGAAGTTTGGGAAGTTTTACAAACTGGCAGCAATGCAAGAGCTGTTGGTTCAACCAATTGTAATGAGCACAGCAGCCGATCGCACTGCATACACTGTGTGATGGTGAAGGGGGAGAATTTGCTAAATGGGGAATGCACAAGTAGCAAACTCTGGTTGGTGGACTTGGCAGGTAGCGAACGGATTGCTAAAGTAGAAGTACAGGGAGAACGACTCAAGGAAACACAAAATATTAATAGATCTCTTTCTGCTCTTGGTGATGTAATATCCGCTCTCGCCACAAAAAGCCCTCATGTTCCTTTTAGAAACTCCAAGCTCACTCATTTGCTTCAAGATTCACTAGGGGGAGATTCAAAGACACTCATGTTTGTACAGATCAGTCCCAATGAAAATGACTTGAATGAGACTCTTTGCTCATTAAACTTTGCGAGCAGAGTAAGAGGAATTGAGTTGGGTCCTGCTAAGAGACAACTTGATATGTCTGAATTCCACAAATGCAAACAGATGGCTGAGAAAACAAAGCTGGATATGAAGAGTAAAGATCTGCAGATCAGAAAGATGGAAGAAACAATGCATGGATTAGACTTGAAGATGAAGGAAAAAGATCAGAAAAACAAAAGTCTACAGGATAAGGTCAAAGAACTTGAAGCTCAACTTCTTGTTGAAAGAAAGCTAGCACGTCAACATGTTGATGCCATAGTAACAGAGCAGATACAGCAGCAGCAGCAGCATATGAAAACTGAATCAGAAGACCACAAGTCTGCACCGGCGAGGCCACAACTTGCTGCGAGTCGACCATTAGGTAGTCAAAAAATTCTCCATGGATCATCATATAACAGCATACTAGGAAAGAAGCAAATAAATCTCACTCGCCCACTAACTGAGAACAACGGCTCCAAACCGTCATTTCCCTTTCCTTCAGTGGATGGTGCCATCAAGTACCCTGATTCCACAGAGAAGGAAAACAACCCAGAGATGGCTGAGCAATCTCTTGTGCCAACAAGGAGGACCGGAAGAGCCTCTATTTGCCCAATGGCAGCTCGACGTGTACCGATGGCCCTTGCTCCTAGGAGAATCTCCCTAACTCCTCAACCAAGCATACCGAGCTCAACTCATCTCCCATCACCAATGCTGCCATTGCCACCATCATATCAAGTTGAGAAGATAGAGAAAGGCGATGGATCAGAGGACAGTAACTTGGCTGAACAGGCGGCACAATGCGAGAGTCCTAAAGAGAGAAAGTATGGAGGTAAGAAGTTGAGCAACATGTTGAGACGAAGCCTTCAAAAGAAGAAGGTACAACAAATGAAGTCTCCAGTGCAACAACAGGTGAGAAGAGGTGGTGGTATCAATCTGGGAGTTGTAGAGATCATTGAGTTCTTCTCATATACTATACCACCCTCTGTATTATATGAATGTGTCTGGTGGTGCGTACAGAACATTATGAGGAGAAGTATGATTTGTCGTGAACACATGCCTTTAAGTGAAGGTAAAGGCGACAATGTAGGGCCGGTGTTGACCACGTGGCAGACAGCATCCTGCTCATTTCCACGTGGGCCCTATCAAAATCTAAACCCATCACCAATGGAGGACGATTCAGATCTCGACTTCAGCTTCACCAGCACCATCTCCACCTCCACCGCCCGCAGCAGCCTCGCTCGGAGCAGCTTAACTCTCAGCTTTAACGAATCCCGCGGCTTCTCCGCCCTTAACCTCCGTCCCCACCGCCACTCCGACCCACACTGGTCCGCCATCAAAGCTGCCACTACTCTTTCCTCCGATGGCCACCTCCACCTCCGCCACCTGAAACTCATCAAACACCTCGGCACTGGCAACCTCGGCCGGGTTTTCCTCTGCCATTTGAGAGACAACGATCACGCCAATTTCGCCCTTAAGGTCGTTGACAGAGACGCTTTAAGTAACAAGAAGCTTTTGCAGGTTCAAACGGAATCCGAGATTCTCGCTTTGCTCGACAACCCTTTTCTCCCTACTCTCTACGCGCGTCTCGACGTCTCTCACTACACGTGCCTCCTTATTGACTACTGCCCAGCCGGTGACCTCCACTCTCTCCTCCGCAAACAGCCTGGAAACCGCCTCTCCGTTTCGGCGGCGAGATTCTTCGTCGCTGAGGTTCTGGTGGCGCTTGAGTATCTTCACGCGCTTGGGATTGTGTACCGGGATCTCAAACCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCACTGATTTCGATTTGTGCTTTAAGTCTGACGTTGTCCCCACTTTTCACACGTCGACACAGCGGGGACCACAGGGTACTCCCTGCTGCTTTGGGATGAGGACCGCGGCAGAGGAGATTGTCGGGGAGTTCGTGGCGGAGCCGACGACGGCCTTTTCCAAGTCATGTGTAGGAACTCATGAGTATTTGGCGCCTGAGTTGGTAACCGGCGGTGGTCACGGAAACGCCGTCGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGCTGCTACACGGAACGACGCCGTTTAGGGGAGTGAACAAGGAGGGTACGCTTAGAAACATAGCGTCTACAGAAGGGGTGAAGTTCAGGGCGGCCATGGAGGAAGAGGAAGGTATAGCAGAGGCGAGGGATCTGATAGAGAGACTACTGGTGAAAGATCCGGCGAGACGGTTGGGATCCGGGAAAGGGGCGACGGAGATCAAACGGCATCCATTCTTCAACGGCATAAAATGGGCGTTAATCCGGATGTACCGACCGCCGGAGGTGTACGGATTGATGAGAAAAGCCAGATCACACGTGAGCCACGTGCGTGACGTCAACCACCGCATGCGGCGTCGGAGCTGGTGGAACTGGAGAAAGCTCTGTAACTATTTAATTAAAAACGGAAATTCCAGTAAATCTCATACCAATACCAATCATTACAGATTTAACGCCAAAAATAAAATGGCTTAA | 4824 | 45.81 | MHDQDSCSIPGEGKSMPEFTSASLDLSISAGSPDIPVNNYCDSPEILDIKCCKLMESPVELSFENSFTGVEVSHNQITPSVRFSNLCETYEQELSPESSFELAPSPATSSFKSEELLQAISVNAGAPSDAVDLDGINYVEDNWYKGGDTIRSDEIEHPLYQTARFGDFCYNFSSLEPGNYVVDLHFAEIVFTNGPPGMRVFDVYLQDQNVVSGLDIYARVGGNKPLIISDLKTSVEVKDLTIGFEGQMGRPIVCGISVRKDLPSNRKEVELLEEMGSSQLSNGEMSKDSDDLIVKEKYLVLQKDLELTKNELAAARKNMEELRKENNQKSSECQEAWKSLNELQNELMRKSMHVGSLAFAIEGQVKEKGKWFSSLRDLTRKVKIMKIENIKLSEEALAFKNCCVDMNEMTSKIQTAFKQQLDLQETLKTKFVEGAKERKELYNKMLELKGNIRVFCRCRPLNTEEIGSGASMVVDFESAKDGELIVKSNGAPRRIFKFDSVFGPQANQGDVFEDTAPFAASVLDGYNVCIFAYGQTGTGKTFTMEGTEGARGVNYRILEELFRLTKERQKLHRYKVSVSVLEVYNEQIRDLLVSASQSGNGSKRLEVRQISEGIHHVPGMVEAPVDNMSEVWEVLQTGSNARAVGSTNCNEHSSRSHCIHCVMVKGENLLNGECTSSKLWLVDLAGSERIAKVEVQGERLKETQNINRSLSALGDVISALATKSPHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLNETLCSLNFASRVRGIELGPAKRQLDMSEFHKCKQMAEKTKLDMKSKDLQIRKMEETMHGLDLKMKEKDQKNKSLQDKVKELEAQLLVERKLARQHVDAIVTEQIQQQQQHMKTESEDHKSAPARPQLAASRPLGSQKILHGSSYNSILGKKQINLTRPLTENNGSKPSFPFPSVDGAIKYPDSTEKENNPEMAEQSLVPTRRTGRASICPMAARRVPMALAPRRISLTPQPSIPSSTHLPSPMLPLPPSYQVEKIEKGDGSEDSNLAEQAAQCESPKERKYGGKKLSNMLRRSLQKKKVQQMKSPVQQQVRRGGGINLGVVEIIEFFSYTIPPSVLYECVWWCVQNIMRRSMICREHMPLSEGKGDNVGPVLTTWQTASCSFPRGPYQNLNPSPMEDDSDLDFSFTSTISTSTARSSLARSSLTLSFNESRGFSALNLRPHRHSDPHWSAIKAATTLSSDGHLHLRHLKLIKHLGTGNLGRVFLCHLRDNDHANFALKVVDRDALSNKKLLQVQTESEILALLDNPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPGNRLSVSAARFFVAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLTDFDLCFKSDVVPTFHTSTQRGPQGTPCCFGMRTAAEEIVGEFVAEPTTAFSKSCVGTHEYLAPELVTGGGHGNAVDWWAFGVFIYELLHGTTPFRGVNKEGTLRNIASTEGVKFRAAMEEEEGIAEARDLIERLLVKDPARRLGSGKGATEIKRHPFFNGIKWALIRMYRPPEVYGLMRKARSHVSHVRDVNHRMRRRSWWNWRKLCNYLIKNGNSSKSHTNTNHYRFNAKNKMA | 1607 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3397380 | 3407054 | + | CmoCh04G006850.1 | Cmo04g00685 | 379660 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00685 | 1607 | Pfam | Malectin domain | 120 | 256 | IPR021720 | - | |
Cmo04g00685 | 1607 | SMART | serkin_6 | 1230 | 1530 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00685 | 1607 | ProSitePatterns | Kinesin motor domain signature. | 677 | 688 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Cmo04g00685 | 1607 | PANTHER | KINESIN-LIKE PROTEIN KIN-14Q | 22 | 1082 | - | - | |
Cmo04g00685 | 1607 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 451 | 812 | IPR027417 | - | |
Cmo04g00685 | 1607 | Coils | Coil | 298 | 332 | - | - | |
Cmo04g00685 | 1607 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1314 | 1540 | - | - | |
Cmo04g00685 | 1607 | SUPERFAMILY | Protein kinase-like (PK-like) | 1206 | 1565 | IPR011009 | - | |
Cmo04g00685 | 1607 | Gene3D | Kinesin motor domain | 395 | 779 | IPR036961 | - | |
Cmo04g00685 | 1607 | Pfam | Protein kinase domain | 1232 | 1530 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00685 | 1607 | Gene3D | Phosphorylase Kinase; domain 1 | 1230 | 1313 | - | - | |
Cmo04g00685 | 1607 | ProSiteProfiles | Protein kinase domain profile. | 1230 | 1530 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00685 | 1607 | MobiDBLite | consensus disorder prediction | 944 | 963 | - | - | |
Cmo04g00685 | 1607 | ProSiteProfiles | Kinesin motor domain profile. | 451 | 777 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cmo04g00685 | 1607 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 22 | 1082 | - | - | |
Cmo04g00685 | 1607 | Coils | Coil | 375 | 395 | - | - | |
Cmo04g00685 | 1607 | CDD | STKc_phototropin_like | 1228 | 1546 | - | - | |
Cmo04g00685 | 1607 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1351 | 1363 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo04g00685 | 1607 | Gene3D | - | 118 | 262 | - | - | |
Cmo04g00685 | 1607 | Coils | Coil | 812 | 853 | - | - | |
Cmo04g00685 | 1607 | MobiDBLite | consensus disorder prediction | 988 | 1042 | - | - | |
Cmo04g00685 | 1607 | MobiDBLite | consensus disorder prediction | 865 | 897 | - | - | |
Cmo04g00685 | 1607 | CDD | KISc_C_terminal | 449 | 779 | - | - | |
Cmo04g00685 | 1607 | SMART | kinesin_4 | 449 | 785 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cmo04g00685 | 1607 | PRINTS | Kinesin heavy chain signature | 678 | 696 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cmo04g00685 | 1607 | PRINTS | Kinesin heavy chain signature | 647 | 664 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cmo04g00685 | 1607 | PRINTS | Kinesin heavy chain signature | 727 | 748 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cmo04g00685 | 1607 | PRINTS | Kinesin heavy chain signature | 525 | 546 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Cmo04g00685 | 1607 | Pfam | Kinesin motor domain | 457 | 777 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g00685 | Cmo16g00503 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01207 | Cmo-Chr1:9760973 | Cmo04g00685 | Cmo-Chr4:3397380 | 4.03E-93 | dispersed | |
Cmo03g00879 | Cmo-Chr3:6843244 | Cmo04g00685 | Cmo-Chr4:3397380 | 1.85E-69 | dispersed | |
Cmo04g00685 | Cmo-Chr4:3397380 | Cmo05g01148 | Cmo-Chr5:9108426 | 3.85E-167 | dispersed | |
Cmo09g00919 | Cmo-Chr9:4801832 | Cmo04g00685 | Cmo-Chr4:3397380 | 1.10E-92 | dispersed | |
Cmo13g00727 | Cmo-Chr13:7257287 | Cmo04g00685 | Cmo-Chr4:3397380 | 1.24E-93 | dispersed | |
Cmo16g00505 | Cmo-Chr16:2428290 | Cmo04g00685 | Cmo-Chr4:3397380 | 0 | transposed | |
Cmo16g00503 | Cmo-Chr16:2420978 | Cmo04g00685 | Cmo-Chr4:3397380 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74241 | PF00225 | Kinesin | 1.30E-107 | CL0023 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00685 | K10406 | - | csv:101222343 | 1764.97 |