Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00685 ATGCATGATCAAGATTCCTGTTCCATCCCTGGTGAAGGGAAATCCATGCCCGAATTTACCTCGGCTTCTCTTGATCTATCTATCTCTGCTGGTTCTCCCGATATTCCAGTCAATAACTACTGTGATTCACCAGAAATCTTGGATATTAAGTGTTGTAAACTTATGGAATCTCCCGTAGAGCTTTCCTTTGAAAATAGCTTTACGGGTGTTGAGGTTAGCCATAACCAGATAACCCCATCTGTTAGATTTTCCAATTTGTGTGAAACATATGAGCAAGAACTGTCTCCAGAATCTTCCTTTGAGTTGGCTCCTTCTCCAGCTACCAGTTCTTTTAAATCTGAAGAACTCCTTCAAGCTATAAGTGTCAATGCAGGTGCTCCAAGTGATGCTGTGGATTTGGATGGGATAAACTATGTGGAAGACAATTGGTATAAGGGTGGTGATACCATTAGGTCTGATGAAATTGAGCATCCTCTGTATCAAACGGCTCGTTTTGGGGATTTTTGTTACAATTTCTCATCATTGGAACCTGGGAATTATGTTGTTGACCTGCATTTTGCTGAAATTGTATTTACCAATGGCCCACCTGGTATGAGGGTGTTTGATGTCTATTTGCAAGACCAGAATGTTGTTTCTGGCCTGGATATATATGCTCGTGTCGGTGGGAATAAGCCTCTCATTATATCTGACCTCAAAACTTCTGTCGAAGTAAAAGATTTAACCATTGGATTTGAAGGACAGATGGGCAGGCCAATTGTTTGTGGTATTTCTGTGAGGAAAGATCTCCCTTCAAATAGAAAAGAAGTTGAACTGCTCGAAGAAATGGGATCATCTCAACTATCCAACGGGGAGATGTCCAAAGATAGTGATGACTTGATAGTAAAAGAGAAGTACCTAGTGCTGCAAAAGGATCTTGAGCTCACGAAGAATGAGCTAGCAGCAGCAAGGAAGAACATGGAGGAACTTAGAAAGGAAAACAATCAAAAGAGTAGCGAATGTCAAGAAGCTTGGAAGTCTTTAAATGAGCTGCAAAACGAGCTCATGCGCAAGTCAATGCATGTTGGATCTCTTGCTTTTGCCATTGAGGGACAGGTGAAAGAGAAGGGCAAATGGTTTTCTTCGTTGAGAGACCTTACCAGAAAAGTAAAGATTATGAAAATAGAAAACATCAAATTATCAGAGGAGGCATTGGCTTTCAAGAACTGCTGTGTAGATATGAATGAAATGACTTCTAAAATTCAGACAGCATTTAAACAGCAATTAGATTTGCAAGAAACCCTGAAGACTAAATTTGTTGAAGGAGCTAAGGAACGGAAAGAACTCTACAATAAGATGTTGGAGTTGAAAGGAAACATTAGGGTCTTTTGTAGGTGTAGGCCTTTAAATACAGAAGAGATTGGTTCTGGAGCTTCAATGGTTGTTGATTTTGAGTCGGCCAAAGATGGCGAGTTGATTGTTAAGTCAAATGGGGCTCCCAGAAGAATCTTTAAGTTTGATTCTGTATTTGGTCCTCAGGCAAATCAAGGAGATGTGTTTGAAGATACTGCGCCATTTGCGGCTTCAGTCCTAGATGGTTACAATGTTTGTATATTTGCATATGGCCAAACCGGGACTGGAAAAACTTTTACAATGGAGGGCACTGAGGGAGCTCGTGGAGTCAATTATAGGATTCTTGAGGAGCTGTTTCGCTTGACAAAGGAACGCCAGAAGCTACATCGATACAAAGTATCTGTTAGTGTCTTGGAAGTGTATAATGAGCAAATACGGGACTTGCTAGTCTCAGCATCTCAGTCAGGAAATGGTTCAAAAAGGCTCGAAGTAAGACAAATCAGTGAAGGAATACATCATGTTCCTGGCATGGTAGAGGCACCTGTCGACAACATGAGTGAAGTTTGGGAAGTTTTACAAACTGGCAGCAATGCAAGAGCTGTTGGTTCAACCAATTGTAATGAGCACAGCAGCCGATCGCACTGCATACACTGTGTGATGGTGAAGGGGGAGAATTTGCTAAATGGGGAATGCACAAGTAGCAAACTCTGGTTGGTGGACTTGGCAGGTAGCGAACGGATTGCTAAAGTAGAAGTACAGGGAGAACGACTCAAGGAAACACAAAATATTAATAGATCTCTTTCTGCTCTTGGTGATGTAATATCCGCTCTCGCCACAAAAAGCCCTCATGTTCCTTTTAGAAACTCCAAGCTCACTCATTTGCTTCAAGATTCACTAGGGGGAGATTCAAAGACACTCATGTTTGTACAGATCAGTCCCAATGAAAATGACTTGAATGAGACTCTTTGCTCATTAAACTTTGCGAGCAGAGTAAGAGGAATTGAGTTGGGTCCTGCTAAGAGACAACTTGATATGTCTGAATTCCACAAATGCAAACAGATGGCTGAGAAAACAAAGCTGGATATGAAGAGTAAAGATCTGCAGATCAGAAAGATGGAAGAAACAATGCATGGATTAGACTTGAAGATGAAGGAAAAAGATCAGAAAAACAAAAGTCTACAGGATAAGGTCAAAGAACTTGAAGCTCAACTTCTTGTTGAAAGAAAGCTAGCACGTCAACATGTTGATGCCATAGTAACAGAGCAGATACAGCAGCAGCAGCAGCATATGAAAACTGAATCAGAAGACCACAAGTCTGCACCGGCGAGGCCACAACTTGCTGCGAGTCGACCATTAGGTAGTCAAAAAATTCTCCATGGATCATCATATAACAGCATACTAGGAAAGAAGCAAATAAATCTCACTCGCCCACTAACTGAGAACAACGGCTCCAAACCGTCATTTCCCTTTCCTTCAGTGGATGGTGCCATCAAGTACCCTGATTCCACAGAGAAGGAAAACAACCCAGAGATGGCTGAGCAATCTCTTGTGCCAACAAGGAGGACCGGAAGAGCCTCTATTTGCCCAATGGCAGCTCGACGTGTACCGATGGCCCTTGCTCCTAGGAGAATCTCCCTAACTCCTCAACCAAGCATACCGAGCTCAACTCATCTCCCATCACCAATGCTGCCATTGCCACCATCATATCAAGTTGAGAAGATAGAGAAAGGCGATGGATCAGAGGACAGTAACTTGGCTGAACAGGCGGCACAATGCGAGAGTCCTAAAGAGAGAAAGTATGGAGGTAAGAAGTTGAGCAACATGTTGAGACGAAGCCTTCAAAAGAAGAAGGTACAACAAATGAAGTCTCCAGTGCAACAACAGGTGAGAAGAGGTGGTGGTATCAATCTGGGAGTTGTAGAGATCATTGAGTTCTTCTCATATACTATACCACCCTCTGTATTATATGAATGTGTCTGGTGGTGCGTACAGAACATTATGAGGAGAAGTATGATTTGTCGTGAACACATGCCTTTAAGTGAAGGTAAAGGCGACAATGTAGGGCCGGTGTTGACCACGTGGCAGACAGCATCCTGCTCATTTCCACGTGGGCCCTATCAAAATCTAAACCCATCACCAATGGAGGACGATTCAGATCTCGACTTCAGCTTCACCAGCACCATCTCCACCTCCACCGCCCGCAGCAGCCTCGCTCGGAGCAGCTTAACTCTCAGCTTTAACGAATCCCGCGGCTTCTCCGCCCTTAACCTCCGTCCCCACCGCCACTCCGACCCACACTGGTCCGCCATCAAAGCTGCCACTACTCTTTCCTCCGATGGCCACCTCCACCTCCGCCACCTGAAACTCATCAAACACCTCGGCACTGGCAACCTCGGCCGGGTTTTCCTCTGCCATTTGAGAGACAACGATCACGCCAATTTCGCCCTTAAGGTCGTTGACAGAGACGCTTTAAGTAACAAGAAGCTTTTGCAGGTTCAAACGGAATCCGAGATTCTCGCTTTGCTCGACAACCCTTTTCTCCCTACTCTCTACGCGCGTCTCGACGTCTCTCACTACACGTGCCTCCTTATTGACTACTGCCCAGCCGGTGACCTCCACTCTCTCCTCCGCAAACAGCCTGGAAACCGCCTCTCCGTTTCGGCGGCGAGATTCTTCGTCGCTGAGGTTCTGGTGGCGCTTGAGTATCTTCACGCGCTTGGGATTGTGTACCGGGATCTCAAACCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCACTGATTTCGATTTGTGCTTTAAGTCTGACGTTGTCCCCACTTTTCACACGTCGACACAGCGGGGACCACAGGGTACTCCCTGCTGCTTTGGGATGAGGACCGCGGCAGAGGAGATTGTCGGGGAGTTCGTGGCGGAGCCGACGACGGCCTTTTCCAAGTCATGTGTAGGAACTCATGAGTATTTGGCGCCTGAGTTGGTAACCGGCGGTGGTCACGGAAACGCCGTCGACTGGTGGGCGTTTGGGGTGTTCATTTACGAGCTGCTACACGGAACGACGCCGTTTAGGGGAGTGAACAAGGAGGGTACGCTTAGAAACATAGCGTCTACAGAAGGGGTGAAGTTCAGGGCGGCCATGGAGGAAGAGGAAGGTATAGCAGAGGCGAGGGATCTGATAGAGAGACTACTGGTGAAAGATCCGGCGAGACGGTTGGGATCCGGGAAAGGGGCGACGGAGATCAAACGGCATCCATTCTTCAACGGCATAAAATGGGCGTTAATCCGGATGTACCGACCGCCGGAGGTGTACGGATTGATGAGAAAAGCCAGATCACACGTGAGCCACGTGCGTGACGTCAACCACCGCATGCGGCGTCGGAGCTGGTGGAACTGGAGAAAGCTCTGTAACTATTTAATTAAAAACGGAAATTCCAGTAAATCTCATACCAATACCAATCATTACAGATTTAACGCCAAAAATAAAATGGCTTAA 4824 45.81 MHDQDSCSIPGEGKSMPEFTSASLDLSISAGSPDIPVNNYCDSPEILDIKCCKLMESPVELSFENSFTGVEVSHNQITPSVRFSNLCETYEQELSPESSFELAPSPATSSFKSEELLQAISVNAGAPSDAVDLDGINYVEDNWYKGGDTIRSDEIEHPLYQTARFGDFCYNFSSLEPGNYVVDLHFAEIVFTNGPPGMRVFDVYLQDQNVVSGLDIYARVGGNKPLIISDLKTSVEVKDLTIGFEGQMGRPIVCGISVRKDLPSNRKEVELLEEMGSSQLSNGEMSKDSDDLIVKEKYLVLQKDLELTKNELAAARKNMEELRKENNQKSSECQEAWKSLNELQNELMRKSMHVGSLAFAIEGQVKEKGKWFSSLRDLTRKVKIMKIENIKLSEEALAFKNCCVDMNEMTSKIQTAFKQQLDLQETLKTKFVEGAKERKELYNKMLELKGNIRVFCRCRPLNTEEIGSGASMVVDFESAKDGELIVKSNGAPRRIFKFDSVFGPQANQGDVFEDTAPFAASVLDGYNVCIFAYGQTGTGKTFTMEGTEGARGVNYRILEELFRLTKERQKLHRYKVSVSVLEVYNEQIRDLLVSASQSGNGSKRLEVRQISEGIHHVPGMVEAPVDNMSEVWEVLQTGSNARAVGSTNCNEHSSRSHCIHCVMVKGENLLNGECTSSKLWLVDLAGSERIAKVEVQGERLKETQNINRSLSALGDVISALATKSPHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLNETLCSLNFASRVRGIELGPAKRQLDMSEFHKCKQMAEKTKLDMKSKDLQIRKMEETMHGLDLKMKEKDQKNKSLQDKVKELEAQLLVERKLARQHVDAIVTEQIQQQQQHMKTESEDHKSAPARPQLAASRPLGSQKILHGSSYNSILGKKQINLTRPLTENNGSKPSFPFPSVDGAIKYPDSTEKENNPEMAEQSLVPTRRTGRASICPMAARRVPMALAPRRISLTPQPSIPSSTHLPSPMLPLPPSYQVEKIEKGDGSEDSNLAEQAAQCESPKERKYGGKKLSNMLRRSLQKKKVQQMKSPVQQQVRRGGGINLGVVEIIEFFSYTIPPSVLYECVWWCVQNIMRRSMICREHMPLSEGKGDNVGPVLTTWQTASCSFPRGPYQNLNPSPMEDDSDLDFSFTSTISTSTARSSLARSSLTLSFNESRGFSALNLRPHRHSDPHWSAIKAATTLSSDGHLHLRHLKLIKHLGTGNLGRVFLCHLRDNDHANFALKVVDRDALSNKKLLQVQTESEILALLDNPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPGNRLSVSAARFFVAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLTDFDLCFKSDVVPTFHTSTQRGPQGTPCCFGMRTAAEEIVGEFVAEPTTAFSKSCVGTHEYLAPELVTGGGHGNAVDWWAFGVFIYELLHGTTPFRGVNKEGTLRNIASTEGVKFRAAMEEEEGIAEARDLIERLLVKDPARRLGSGKGATEIKRHPFFNGIKWALIRMYRPPEVYGLMRKARSHVSHVRDVNHRMRRRSWWNWRKLCNYLIKNGNSSKSHTNTNHYRFNAKNKMA 1607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3397380 3407054 + CmoCh04G006850.1 Cmo04g00685 379660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00685 1607 Pfam Malectin domain 120 256 IPR021720 -
Cmo04g00685 1607 SMART serkin_6 1230 1530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00685 1607 ProSitePatterns Kinesin motor domain signature. 677 688 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cmo04g00685 1607 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 22 1082 - -
Cmo04g00685 1607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 812 IPR027417 -
Cmo04g00685 1607 Coils Coil 298 332 - -
Cmo04g00685 1607 Gene3D Transferase(Phosphotransferase) domain 1 1314 1540 - -
Cmo04g00685 1607 SUPERFAMILY Protein kinase-like (PK-like) 1206 1565 IPR011009 -
Cmo04g00685 1607 Gene3D Kinesin motor domain 395 779 IPR036961 -
Cmo04g00685 1607 Pfam Protein kinase domain 1232 1530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00685 1607 Gene3D Phosphorylase Kinase; domain 1 1230 1313 - -
Cmo04g00685 1607 ProSiteProfiles Protein kinase domain profile. 1230 1530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00685 1607 MobiDBLite consensus disorder prediction 944 963 - -
Cmo04g00685 1607 ProSiteProfiles Kinesin motor domain profile. 451 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmo04g00685 1607 PANTHER KINESIN-LIKE PROTEIN KLP-3 22 1082 - -
Cmo04g00685 1607 Coils Coil 375 395 - -
Cmo04g00685 1607 CDD STKc_phototropin_like 1228 1546 - -
Cmo04g00685 1607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1351 1363 IPR008271 GO:0004672|GO:0006468
Cmo04g00685 1607 Gene3D - 118 262 - -
Cmo04g00685 1607 Coils Coil 812 853 - -
Cmo04g00685 1607 MobiDBLite consensus disorder prediction 988 1042 - -
Cmo04g00685 1607 MobiDBLite consensus disorder prediction 865 897 - -
Cmo04g00685 1607 CDD KISc_C_terminal 449 779 - -
Cmo04g00685 1607 SMART kinesin_4 449 785 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmo04g00685 1607 PRINTS Kinesin heavy chain signature 678 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmo04g00685 1607 PRINTS Kinesin heavy chain signature 647 664 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmo04g00685 1607 PRINTS Kinesin heavy chain signature 727 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmo04g00685 1607 PRINTS Kinesin heavy chain signature 525 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cmo04g00685 1607 Pfam Kinesin motor domain 457 777 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00685 Cmo16g00503 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01207 Cmo-Chr1:9760973 Cmo04g00685 Cmo-Chr4:3397380 4.03E-93 dispersed
Cmo03g00879 Cmo-Chr3:6843244 Cmo04g00685 Cmo-Chr4:3397380 1.85E-69 dispersed
Cmo04g00685 Cmo-Chr4:3397380 Cmo05g01148 Cmo-Chr5:9108426 3.85E-167 dispersed
Cmo09g00919 Cmo-Chr9:4801832 Cmo04g00685 Cmo-Chr4:3397380 1.10E-92 dispersed
Cmo13g00727 Cmo-Chr13:7257287 Cmo04g00685 Cmo-Chr4:3397380 1.24E-93 dispersed
Cmo16g00505 Cmo-Chr16:2428290 Cmo04g00685 Cmo-Chr4:3397380 0 transposed
Cmo16g00503 Cmo-Chr16:2420978 Cmo04g00685 Cmo-Chr4:3397380 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74241 PF00225 Kinesin 1.30E-107 CL0023 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00685 K10406 - csv:101222343 1764.97