Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00687 | ATGAGTTCATCACAAGAGCTGGTTTTGTTGGACTTACGGGCTAGCCCTTTTGCCACGAGGGTGAGGGTGGCTTTGGCAGAGAAGGGGCTAAACTGCGAGATAAAACAGGAAGATTTGAGTAACAAATCTCCTCTGCTTCTGGAGATGAACCCTGTACAAAAGCAAATCCCTGTTTTGATTCACAAAGGCAAGCCCATTCTCGAGTCTATCATAATCGTTGAATACATCGACGAGACATGGAGCAGTGAGGCAGGCTATGCTAATTTGCTTCCTTCCCATCCTTACGAGAGATCCCACGCTAGATTTTGGGCTGACTATGTGGACAAGAAGATCTACCCAAATGGAGGGAAGCTGTGGAACAAAAAGGATCTGACAGAGGAGGAGAAGGAAGCAGCAATGAAGGAGCTGATGGGGAGCTTCAAGCAGCTGGAGGAAGAGCTTGGAGACAAGCCCTATTTTGGAGGCCAATCATTTGGGTTTATAGATCTGTCGCTCATTCCATTTTACAGCATGTTTCTTGCCTTCAAATTGCTTGGAAATTTGGACTTGGAAGCTGAGTGTCCTAAGATCTTGGAATGGGCTAAGAGGTGCTGCCTCAGAGACACTGTCGCCAAAAGTATGCCCACTCAACAAGAGGTTTACGACGTCGTTTTGGATATTATAAAACGCCATTAG | 675 | 46.22 | MSSSQELVLLDLRASPFATRVRVALAEKGLNCEIKQEDLSNKSPLLLEMNPVQKQIPVLIHKGKPILESIIIVEYIDETWSSEAGYANLLPSHPYERSHARFWADYVDKKIYPNGGKLWNKKDLTEEEKEAAMKELMGSFKQLEEELGDKPYFGGQSFGFIDLSLIPFYSMFLAFKLLGNLDLEAECPKILEWAKRCCLRDTVAKSMPTQQEVYDVVLDIIKRH | 224 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3407212 | 3408045 | - | CmoCh04G006870.1 | Cmo04g00687 | 379662 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00687 | 224 | Gene3D | - | 93 | 224 | - | - | |
Cmo04g00687 | 224 | Coils | Coil | 126 | 146 | - | - | |
Cmo04g00687 | 224 | SFLD | Glutathione Transferase (cytosolic) | 4 | 219 | IPR040079 | - | |
Cmo04g00687 | 224 | Pfam | Glutathione S-transferase, C-terminal domain | 127 | 196 | - | - | |
Cmo04g00687 | 224 | SUPERFAMILY | Thioredoxin-like | 7 | 112 | IPR036249 | - | |
Cmo04g00687 | 224 | Pfam | Glutathione S-transferase, N-terminal domain | 7 | 78 | IPR004045 | - | |
Cmo04g00687 | 224 | PANTHER | GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN | 6 | 220 | - | - | |
Cmo04g00687 | 224 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 93 | 216 | IPR010987 | - | |
Cmo04g00687 | 224 | Gene3D | Glutaredoxin | 1 | 92 | - | - | |
Cmo04g00687 | 224 | SFLD | Main.3: Omega- and Tau-like | 4 | 219 | IPR045073 | - | |
Cmo04g00687 | 224 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 6 | 220 | IPR045073 | - | |
Cmo04g00687 | 224 | CDD | GST_N_Tau | 7 | 80 | - | - | |
Cmo04g00687 | 224 | CDD | GST_C_Tau | 94 | 220 | IPR045074 | GO:0004364|GO:0006749 | |
Cmo04g00687 | 224 | SUPERFAMILY | GST C-terminal domain-like | 78 | 222 | IPR036282 | - | |
Cmo04g00687 | 224 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 5 | 84 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00687 | Cmo-Chr4:3407212 | Cmo16g00499 | Cmo-Chr16:2411394 | 4.81E-71 | dispersed | |
Cmo04g00687 | Cmo-Chr4:3407212 | Cmo04g00688 | Cmo-Chr4:3408834 | 1.34E-65 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00687 | K00799 | - | rcu:8274525 | 276.944 |