Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00688 | ATGGCGAATGAAGTGAAGCTGTTGGATTTCTGGCCCAGCATGTTTGGGATGCGAGTTAGAATAGCTCTGGCCGAGAAGGGCGTGGCGTACGAATACGTGGAAGAAGATCTGAGAAACAAGAGCCCTTTGCTTCTGCAGATGAACCCAATTCACAAGAAAATCCCTGTTCTTGTTCATAATGGAAAACCCATCTCCGAATCTTCCATTATCGTTCAGTACATCGATGAAACGTGGAAGGACAGAGCTCCTCTGTTGCCGTCTGATCCATACGAGAGGGCTCAAGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGCTTTATGATGAAACGAGGAAGACATGGGGGAGCAAGGGAGAGGAGCAGGAGGCAGGGAAGAGGGGGATGATTGCAATTTTGAAGCAACTGGAGGAAGTTCTTGGGGAGAAGGCTTTCTTTGGAGGAGAGTGTTTGGGGTTCCTAGACATTGGTTTGATTGGATTCTCATCTTGGTTTTATAGCTATGAGACCATTGGGAAGTTCAGCATCGAGGCAGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCTTGCAGAAGGAGAGTGTTTCAAAGTCCCTGCCTGACCCCATGAAAGTCATGTTCGGGATGCGTGTTAGAATAGCTCTGGCTGAGAAGGGCGTGGCCTACGAATATGTGGAACAAGATCTGAAAAACAAGACCCCTTTGCTTCTGGAGATGAATCCAATTCACAAAAAGGTACCTGTTTTTGTTCATAATGGAAAACCCATCAGTGAATCTTCCATTATCATTCAGTACATTGATGAAGTATGGAAAGACAGAGCTCCTCTGTTGCCGTCTGATCCTTACGAGAGGGCTCAAGCCAGGTTCTGGGTGGATTTCATCGACAAGAAGCTTTACATTGAAACAAGGAAGATATACATGAGCAAGGGAGAAGAGCAGGAGACAGGCAAGAAGGAGGTGATAGCAATTTTGAAGCAAGTGGAAGCAGTTCTTGGGGAGAAGGCCTACTTTGGAGGAGAGTGTTTGGGGTTCATAGACATTGCCTTGATTGGATTCACATCTTGGTTTTATAGCTACGAAACCATTGGGAATTTCAGCATTGAAGCTGAGTGTCCCAAGATCATGGCTTGGGTGAAGAGATGCCTGCAAAAGGAGAGCGTTTCAAGCTCCCTGCCTGACCCCATCAAAGTCATCACTTCTTGCTTCAAGTCAGGAAAGCACTTGGCCTTGACTAACCAAATTGCTTCAGTCAGGAAGGACTTGGTGTGGATCAAAATGGATGAAATTTTTAGTGTTTGTGGTTGGGGTTTTGATATCTTCTCCCACTTTGATGCAGCGTACATGTTCGGGATGCGAGTCAAAGTAGCCCTGGCCATGAAGGGCGTGGCCTACGAATACGTAGAACAAGATCTAAGAAACAAGAGCCCTCTGCTTCTGGAAATGAACCCAATCCACAAGAAAATCCCTGTTCTTGTTCATAACGGAAAACCCATCTGTGAATCATCCATTATCGTTCAGTACATCGATGAAACGTGGAAGAACAGAGCTCCTCTGTTACCATCTGATCCATACGAGAGGGCTCAGGCCAGGTTTTGGGTGGATTTCATCGACAAGAAGGTGTTTGAGAGTGGGAGGAAGATCTGGGCTAGCAAGGGAGAGGAGCGTGAAGAAGGGAAGAAGGAGTTCATGGGAAGCTTGAAGAAGCTGGAGGAAGTTCTTGGGGAGAAGGCTTACTTTGGAGGCGAGAATGTGGGGTTTGTGGACATTGTTTTGATTGGATACTACACCTGGTTTTACAGCTACGAGAGCATTGGGAACTTGAGCGTTGAGGCAGAGTGCTCCAAGATACTGGGATGGGCTAAGAGATGCTTGCAAAATGAGAGCGTTTCTAACTCCCTGCCTGACCCCTTCAAGATCTGTGACTTTGTGCTTCTAATGAAGAAGAAGTATGGCCCTGAATGA | 1962 | 46.64 | MANEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEEDLRNKSPLLLQMNPIHKKIPVLVHNGKPISESSIIVQYIDETWKDRAPLLPSDPYERAQARFWVDFIDKKLYDETRKTWGSKGEEQEAGKRGMIAILKQLEEVLGEKAFFGGECLGFLDIGLIGFSSWFYSYETIGKFSIEAECPKIMAWVKRCLQKESVSKSLPDPMKVMFGMRVRIALAEKGVAYEYVEQDLKNKTPLLLEMNPIHKKVPVFVHNGKPISESSIIIQYIDEVWKDRAPLLPSDPYERAQARFWVDFIDKKLYIETRKIYMSKGEEQETGKKEVIAILKQVEAVLGEKAYFGGECLGFIDIALIGFTSWFYSYETIGNFSIEAECPKIMAWVKRCLQKESVSSSLPDPIKVITSCFKSGKHLALTNQIASVRKDLVWIKMDEIFSVCGWGFDIFSHFDAAYMFGMRVKVALAMKGVAYEYVEQDLRNKSPLLLEMNPIHKKIPVLVHNGKPICESSIIVQYIDETWKNRAPLLPSDPYERAQARFWVDFIDKKVFESGRKIWASKGEEREEGKKEFMGSLKKLEEVLGEKAYFGGENVGFVDIVLIGYYTWFYSYESIGNLSVEAECSKILGWAKRCLQNESVSNSLPDPFKICDFVLLMKKKYGPE | 653 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3408834 | 3412302 | - | CmoCh04G006880.1 | Cmo04g00688 | 379663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00688 | 653 | SFLD | Main.3: Omega- and Tau-like | 206 | 409 | IPR045073 | - | |
Cmo04g00688 | 653 | SFLD | Main.3: Omega- and Tau-like | 2 | 205 | IPR045073 | - | |
Cmo04g00688 | 653 | SFLD | Main.3: Omega- and Tau-like | 448 | 650 | IPR045073 | - | |
Cmo04g00688 | 653 | SUPERFAMILY | GST C-terminal domain-like | 76 | 205 | IPR036282 | - | |
Cmo04g00688 | 653 | CDD | GST_C_Tau | 281 | 398 | IPR045074 | GO:0004364|GO:0006749 | |
Cmo04g00688 | 653 | SUPERFAMILY | Thioredoxin-like | 207 | 299 | IPR036249 | - | |
Cmo04g00688 | 653 | SUPERFAMILY | Thioredoxin-like | 4 | 107 | IPR036249 | - | |
Cmo04g00688 | 653 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Cmo04g00688 | 653 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 280 | 408 | IPR010987 | - | |
Cmo04g00688 | 653 | Gene3D | Glutaredoxin | 208 | 279 | - | - | |
Cmo04g00688 | 653 | CDD | GST_C_Tau | 89 | 206 | IPR045074 | GO:0004364|GO:0006749 | |
Cmo04g00688 | 653 | Pfam | Glutathione S-transferase, C-terminal domain | 310 | 384 | IPR004046 | - | |
Cmo04g00688 | 653 | Gene3D | - | 88 | 207 | - | - | |
Cmo04g00688 | 653 | SUPERFAMILY | Thioredoxin-like | 449 | 540 | IPR036249 | - | |
Cmo04g00688 | 653 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 235 | IPR010987 | - | |
Cmo04g00688 | 653 | SUPERFAMILY | GST C-terminal domain-like | 510 | 650 | IPR036282 | - | |
Cmo04g00688 | 653 | Gene3D | - | 522 | 653 | - | - | |
Cmo04g00688 | 653 | Gene3D | - | 280 | 410 | - | - | |
Cmo04g00688 | 653 | CDD | GST_C_Tau | 523 | 646 | IPR045074 | GO:0004364|GO:0006749 | |
Cmo04g00688 | 653 | SUPERFAMILY | GST C-terminal domain-like | 268 | 394 | IPR036282 | - | |
Cmo04g00688 | 653 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 437 | 516 | IPR004045 | - | |
Cmo04g00688 | 653 | Gene3D | Glutaredoxin | 442 | 521 | - | - | |
Cmo04g00688 | 653 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Cmo04g00688 | 653 | CDD | GST_N_Tau | 206 | 270 | - | - | |
Cmo04g00688 | 653 | SFLD | Main (cytGST) | 206 | 409 | - | - | |
Cmo04g00688 | 653 | SFLD | Main (cytGST) | 448 | 650 | - | - | |
Cmo04g00688 | 653 | SFLD | Main (cytGST) | 2 | 205 | - | - | |
Cmo04g00688 | 653 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 522 | 642 | IPR010987 | - | |
Cmo04g00688 | 653 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 205 | 399 | IPR045073 | - | |
Cmo04g00688 | 653 | CDD | GST_N_Tau | 448 | 512 | - | - | |
Cmo04g00688 | 653 | Pfam | Glutathione S-transferase, N-terminal domain | 448 | 510 | IPR004045 | - | |
Cmo04g00688 | 653 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cmo04g00688 | 653 | Pfam | Glutathione S-transferase, N-terminal domain | 207 | 268 | IPR004045 | - | |
Cmo04g00688 | 653 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
Cmo04g00688 | 653 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 446 | 646 | - | - | |
Cmo04g00688 | 653 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 205 | 399 | - | - | |
Cmo04g00688 | 653 | PANTHER | GLUTATHIONE S-TRANSFERASE PARC-RELATED | 4 | 206 | - | - | |
Cmo04g00688 | 653 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 446 | 646 | IPR045073 | - | |
Cmo04g00688 | 653 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 206 | IPR045073 | - | |
Cmo04g00688 | 653 | Pfam | Glutathione S-transferase, C-terminal domain | 124 | 188 | - | - | |
Cmo04g00688 | 653 | Pfam | Glutathione S-transferase, C-terminal domain | 554 | 622 | - | - | |
Cmo04g00688 | 653 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 195 | 274 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00338 | Cmo-Chr4:1659484 | Cmo04g00688 | Cmo-Chr4:3408834 | 5.71E-46 | dispersed | |
Cmo04g00339 | Cmo-Chr4:1664939 | Cmo04g00688 | Cmo-Chr4:3408834 | 5.72E-36 | dispersed | |
Cmo04g00688 | Cmo-Chr4:3408834 | Cmo16g00499 | Cmo-Chr16:2411394 | 1.32E-92 | dispersed | |
Cmo16g00501 | Cmo-Chr16:2417740 | Cmo04g00688 | Cmo-Chr4:3408834 | 9.45E-36 | dispersed | |
Cmo04g00687 | Cmo-Chr4:3407212 | Cmo04g00688 | Cmo-Chr4:3408834 | 1.34E-65 | tandem | |
Cmo16g00500 | Cmo-Chr16:2417204 | Cmo04g00688 | Cmo-Chr4:3408834 | 1.63E-41 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00688 | K00799 | - | csv:101218562 | 350.517 |