Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00690 ATGTCTATATGGATGGAGACTTTTCCTTTTGAGTTTTCTCGTTCGGAGAGATTCACTCTAACCTCCTCCTCAAATCAGGACATCAGAACCAGAGCAAGATGCAACAAACGAGCTCCGAATCTTATCGGAGCTGGAACAGATAAGGAGACTAATGGCGATGAATCTAATGACTTGCCAAAGTTTAATCAAACGACGCCGTGTGAACCTCTAGTGGCTATATCTGTAGCTGCGAGCCTTCTTCCCACCGGGCCGCCGTTCAGTGCGAGTTTTCAACTGGTTCCTTCTCAACAGTTAGTATACTATTGGGTTTCTGCTCCACCCTGCAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTATCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTTGGAACTATCAAAAGCGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTCGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTCGATGTTGCTAGAAAATATTTTGAACTTGCTGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATCGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAACAAAAGGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGA 1227 45.48 MSIWMETFPFEFSRSERFTLTSSSNQDIRTRARCNKRAPNLIGAGTDKETNGDESNDLPKFNQTTPCEPLVAISVAASLLPTGPPFSASFQLVPSQQLVYYWVSAPPCSAYRSLMMSSSNMGLRFLSYPQRNLLMKLSSMPPVAAIASFGTIKSAMACRRVRCHLNLDDSSSKKRQLERVRSANSNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLDVARKYFELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGIIVIDNVLWYGKVADPTVNDKQTDSIRRLNKRIMEDDRVGISIVPIGDGMTICQKR 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3425434 3429547 - CmoCh04G006900.1 Cmo04g00690 379665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00690 408 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 183 408 - -
Cmo04g00690 408 CDD AdoMet_MTases 251 356 - -
Cmo04g00690 408 PANTHER O-METHYLTRANSFERASE-RELATED 183 408 - -
Cmo04g00690 408 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 203 408 IPR029063 -
Cmo04g00690 408 Gene3D Vaccinia Virus protein VP39 181 408 IPR029063 -
Cmo04g00690 408 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 191 408 IPR002935 GO:0008171
Cmo04g00690 408 Pfam O-methyltransferase 209 407 IPR002935 GO:0008171
Cmo04g00690 408 MobiDBLite consensus disorder prediction 38 58 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00690 Cmo-Chr4:3425434 Cmo18g00692 Cmo-Chr18:8802403 4.02E-46 dispersed
Cmo04g00690 Cmo-Chr4:3425434 Cmo11g01362 Cmo-Chr11:9517591 3.98E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00690 - - cmo:103492978 473.396