Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00702 | ATGACGCAAGATCATCCAAAGAAGGAGGCCAAGAAGATCAACTTTTTTACTGAATATGGGGATGCTAATAGATATAAGATTCTTGAAGTTATAGGCAGGGGAAGTTACGGAGTTGTTTGTTCTGCTATAGACGTACAAACCAAAGAGAAAGTTGCAATAAAGAGAATTCATGACATATTTGATCATGTATCTGATGCTGTTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTGCGGCATCCTGATATTGTTGATATCAAGCACATCATGTTGCCACCTTCTAAAAAGGAATTTAAGGACATTTATGTGGTGTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGATTTGACCCGTGAACATCATCAGTTCTTCCTCTATCAAATGCTACGTGCATTGAAATTCATGCATACAGCAAATGTCTATCATAGAGATCTGAAGCCGAAGAATATACTGGCAAATGCTAATTGCAAGCTTAAAGTTTGTGATTTTGGACTTGCTAGAGCTGCTTTCAGCGATGTCCCAACTACAATATTTTGGACAGACTATGTTGCTACTAGATGGTATAGAGCTCCAGAGCTGTGTGGATCGTTCTGTTCAAAGGTAGGCAGTAAACTAGTTCACATTGATTCCTTCTACGAATTTTCGCAATCACTGGGATGCACCGTTACCATGACTTATGTTACATATGTTATTGATTGTCTCAATGTTGAAGCAACAATGTCCCCCCTGCTCCTCCCTCCACCACCATACAAGGAAAGATCAGAACAACATCTTGTAGTGATTTACTGGCCATGGTTCAGTTGGAAATGCTTTCCTTTTTGGTATAAAATGTATGTAATGTATAATAGTGGGGGGACTATTGAACTGTCCTGGAAGTTGAAATGTCTGTCATTCAGGTCAGGTTATATCTGTTTTTTTCTTAAGTTTTTGCTTAAACTTAGTTTCCCCTTTTTGTTTTCTAATTATACTCCCGCGATAGATATTTGGAGCATTGGCTGCATATTTGCTGAGGTTTTGATAGGGAAGCCACTGTTTCCTGGTAAAAGTGTTGCCCATCAACTGGAGTTAATTACTGATCTTCTTGGGACTCCCTCATTGGAAATCATTGCAGGAGTTCGGAACGAAAAGGCCAGGAAATATTTGACCGAAATGAGAAAGAAATCTCCAGTGCCGTTTTCACAAAGATTTCCCAATGCGGATCCTGCAGCCATCCGCTTATTACAAAGACTATTAGCATTTGATCCGAAGGATCGACCATCCGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTAGCTAAAGTTGATAGAGAGCCTTCTTGTCAGCCAATATCAAGAGTGGAATTTGAGTTTGAGAGACGGAAATTAACAAAGGATGACATAAGGGAACTATTATACAGAGAAATATTAGAATATCATCCTCAAATTCGTGAAGATTATTTGAATAGAACTGAGACTACAAAGCTCCTCTATCCTAGGTTCAAATTCATTTTCCTCTTCAACCTTACAACATTCAATACTCCTATCATTGTCAGCGTTACAGGTCATTTTAGAAGCCAATTCACCTACCTCAAGGAGAATGGTGCTAAAAGCGCACCGGTTTTGCCTCTCGAACGGAAACACTTCTCCCTCCCACGTATAAGTTTTGTGTTCTTACAAGCTCAGTTTGCGAATCGTCTTCTTAGGTCCACGGTTTGCACAAATTTGGATTCACCTGATCGTGAACCGGATCGGCGAAATCCGAAAGTCTCTAATAACAGCATGGGATTATCTGATAGAAAGTTTGGGAATCCATCAAAGGCTCATCCTCCTCCCAAAGTGCCTACTGGTATGAACATATTTCTCTTTAGTGGACAAATCTTTCAAGCTCAACAATACCATGATACTGATATAACTGATATAGTTGCTTTCGCAAATCTAGGACGAGTTTCCGGGCCCGTTCTCCCATACGAGAACAGAAACATAACAAATGTTTATTCGAGACTAACATCACAAATTAGAAGTTTGGATTTGTGA | 2040 | 39.61 | MTQDHPKKEAKKINFFTEYGDANRYKILEVIGRGSYGVVCSAIDVQTKEKVAIKRIHDIFDHVSDAVRILREVKLLRLLRHPDIVDIKHIMLPPSKKEFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDFGLARAAFSDVPTTIFWTDYVATRWYRAPELCGSFCSKVGSKLVHIDSFYEFSQSLGCTVTMTYVTYVIDCLNVEATMSPLLLPPPPYKERSEQHLVVIYWPWFSWKCFPFWYKMYVMYNSGGTIELSWKLKCLSFRSGYICFFLKFLLKLSFPFLFSNYTPAIDIWSIGCIFAEVLIGKPLFPGKSVAHQLELITDLLGTPSLEIIAGVRNEKARKYLTEMRKKSPVPFSQRFPNADPAAIRLLQRLLAFDPKDRPSAVEALADPYFKGLAKVDREPSCQPISRVEFEFERRKLTKDDIRELLYREILEYHPQIREDYLNRTETTKLLYPRFKFIFLFNLTTFNTPIIVSVTGHFRSQFTYLKENGAKSAPVLPLERKHFSLPRISFVFLQAQFANRLLRSTVCTNLDSPDREPDRRNPKVSNNSMGLSDRKFGNPSKAHPPPKVPTGMNIFLFSGQIFQAQQYHDTDITDIVAFANLGRVSGPVLPYENRNITNVYSRLTSQIRSLDL | 679 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 3484679 | 3488534 | - | CmoCh04G007020.1 | Cmo04g00702 | 379677 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00702 | 679 | MobiDBLite | consensus disorder prediction | 575 | 613 | - | - | |
Cmo04g00702 | 679 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 10 | 207 | - | - | |
Cmo04g00702 | 679 | Pfam | Protein kinase domain | 328 | 437 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00702 | 679 | Pfam | Protein kinase domain | 25 | 201 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00702 | 679 | ProSitePatterns | MAP kinase signature. | 60 | 163 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cmo04g00702 | 679 | CDD | STKc_TDY_MAPK | 24 | 482 | - | - | |
Cmo04g00702 | 679 | SMART | serkin_6 | 25 | 437 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00702 | 679 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE 19 | 10 | 207 | - | - | |
Cmo04g00702 | 679 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524 | |
Cmo04g00702 | 679 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 203 | IPR011009 | - | |
Cmo04g00702 | 679 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 325 | 507 | - | - | |
Cmo04g00702 | 679 | Gene3D | Phosphorylase Kinase; domain 1 | 23 | 108 | - | - | |
Cmo04g00702 | 679 | ProSiteProfiles | Protein kinase domain profile. | 25 | 437 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00702 | 679 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE 19 | 325 | 507 | - | - | |
Cmo04g00702 | 679 | Gene3D | Phosphorylase Kinase; domain 1 | 461 | 483 | - | - | |
Cmo04g00702 | 679 | Gene3D | Transferase(Phosphotransferase) domain 1 | 326 | 460 | - | - | |
Cmo04g00702 | 679 | SUPERFAMILY | Protein kinase-like (PK-like) | 327 | 483 | IPR011009 | - | |
Cmo04g00702 | 679 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 204 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00702 | Cmo-Chr4:3484679 | Cmo19g01097 | Cmo-Chr19:9403201 | 3.51E-96 | dispersed | |
Cmo16g00482 | Cmo-Chr16:2306493 | Cmo04g00702 | Cmo-Chr4:3484679 | 6.66E-153 | transposed | |
Cmo16g00481 | Cmo-Chr16:2304256 | Cmo04g00702 | Cmo-Chr4:3484679 | 8.21E-137 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74242 | PF00069 | Pkinase | 5.40E-44 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00702 | - | K04371 | csv:101213897 | 471.855 |