Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00711 ATGGTTTTTCCAACTTCTATATTCACGATTCTCGGTGTTCTTCTTCTGTGGATTTTGATATTCCAGGGATTTGGATCCCACGCTCAGTTTTTGCCCGAAGCCGAAGTGAAAGCCCTTCAAACAATATCTTCGAAACTTAAGAATTTAAGCTGGAATGTTACCCGGACTTCTTGCATTCAAGGTGAAGGCTTTTCCAATGGAGCTTTCCCGGGAAACCAAATCATGAGGAATGTCTCATGCAATTGTACTTCCACTGTTTGTCATGTGACAATCATCCTGCTTAAGGGTCTCAATCTAACAGGAACTTTTCCAGATGAATTTGGTAATCTTACGCATCTGCAGGAACTTGATCTTACTCGCAACCATATTAATGGCCAACTACCCACTAGTCTTGCCAATGCTCCTCTTGTCAAACTTTCTCTCTTGGGAAACAGGCTAAACGGTTCAATTCCCAAGGAAATTGGTGACATTGGCACCCTTGAAGAGCTGGTCTTGGAAGACAACCTGTTAACTGGAAATCTACCTCCCAACCTTGGAAATCTGAACCGTTTGAATAGACTGCTTCTGTCCGCAAACAATTTCACAGGAAGAATACCAGACTCATTCGGAAAACTAAAGAACTTGGTTGATTTTAGGATAGATGGGAATGGAGTGTCTGGGAAGATTCCTGAACTCATCGGGAATTGGATCAACCTTGACAGACTGGATATTCAAGGAACATCAATGGAAACCCCCATTCCTTCTACAATATCTCAATTGAAGAACCTAACTCAATTGAGGATATCTGATTTGAAGGGATCATTTATAAGTTTCCCCAATTTGACAGATCTGATAAATATGGAAGAATTGGTCCTGAGGAACTGTTTAATTAATGGTTCAATCCCTCAGTATATTGGAGAAATGAATAAATTATCAACTCTGGATCTAAGCTTCAACCATTTAACTGGTCCAATTCCAGCGACATTTCAGAATCTGATCAAGAGAAAGATAGACTTCATGTTTCTGACAAACAACTCACTGAGTGGTGAAGTGCCCGGTTGGATCTTGAGGAGCAAAAAGAACATAGATTTGTCTTACAACAAATTTTCAGGGTCTACTCTTGCTAGTTGCCAACAGTCACCTGTGAACTTGGTAGCCAGTTACCCACCTACAGCGAATCATCAAGTTCCTTGGTGCCTCAAGAAGGACCTTCCATGCTCCGGAAAAGCTGAATATCATTCCTTGTTTATTAATTGTGGAGGAACCAGATTGAGGGCTGATGGGCATGATTATGAAGAGGACTTAACTACAGAGGGCAAGTCAAATTTCTTTTCTGTTTCAGAAAAATGGGCTTATAGCAGTACAGGAGTTTTTCTAGGTGATGAAAATGCCGACTACTTGGCTACAAATAAATTCGGCCTGAATGTGAGTGGTCTTGGCTATAACCAAAATGCCCGTCTTTCCCCTCTCTCCCTCAAATATTATGGTCTCTGCCTGCGGAGCGGAAGCTACAATGTGAAGCTCCACTTTGCTGAAATTATGTACTCTAATGATCAAACTTTTAGCAGCCTGGGAAAGCGTATATTCGATATATCAATTCAAGGAAAACTAGTTAAAAAGAATTTCAATATTGTGGAGGCAGCTGGGGGTGTTGGTAAGAACTTCACAGTGGAAGATAAAAATGTTTCTGTCAATGGCAGTACCCTTGAGATTCATCTATATTGGGCTGGTAAAGGAACCACAGCAGTGCCAGACAGAGGAGTTTATGGACCCCTTATTTCTGCAATCACAGTTACACCAAACTTTAAAATTGACGAGGGAGGACTATCAGCTGGAGCACTGGCCGGCATTATAATTTCTTCATGTGCAGTACTCATCATATTGGTCGTTGTATTTCTTTGGATGAAAGGTTACATCTGTAAGAAGGAAGTCCCAGCTAATGAACTTTCTGGCGTAGATTTACAAACGGGTCATTTTACATTGAAACAAATTAAAGCTGCCACTAACAACTTTGATCCTAAAAGTAAAATAGGCGAAGGTGGATTTGGGCCTGTCTATAAGGGTGTATTGTCTGATGGCGTTTTGATTGCTGTAAAGCAACTCTCCTCGAAATCGAAGCAAGGTAGCCGTGAGTTTGTCACTGAGATTGGGATGATATCTGCATTGCAACACCCAAACCTAGTTAAGCTCTTTGGCTGCTGTGTTGAGGGAAATCAATTGTTGCTAGTATATGAATACATGGAAAATAATAGTCTTGCCCGTGCGCTTTTCGGTCGGGAGGAACAAAGGCTACATCTTGACTGGCGAACAAGGAAGAAGATATGCTTGGAGATAGCTAGGGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATTGTTCATAGAGACATCAAGGCCACAAATGTGCTGCTCGACAAAGATCTCACTGCCAAGATTTCTGACTTTGGTTTGGCTAAGCTTGATGAAGAGGAGAACACCCACATCAGCACACGAATTGCTGGAACCATCGGTTATATGGCACCCGAGTATGCAATGAGAGGATACTTGACAGACAAGGCAGATGTTTACAGCTTTGGAGTCGTTGCTTTAGAGATAGTCAGTGGAAAAAGTAACACAAATTACAGACCGAAGGAAGAGTTCGTCTATCTTCTTGATTGGGCCTATGTACTGGAAGAACAGGGTAACCTTCTAGAACTGGTAGATCCAGACCTTGGTTCAAAGTACTCATCAGAGGAAGCAATGAGGATGCTGAACATAGCTCTGTTATGCACCAACCCATCTCCCACTCTGAGGCCAACCATGTCGTCTGTGGTGAGTATGCTTGAAGGCAACATTCCAGTCCAAGCACCCATCATCAAGCGCACTGCATCAGGCCAAGATCCAAGGTTTAAAGCGTTTGAGAAGCTCTCACACGATAGCAGATCGCAGATTTCAAGCTCAACATTTTCGGAAGAAGTTGCTGAGGCTCAGAAAAGCATGTTAATGGATGGGCCATGTACGGAATCCGCAGTATCCATTGACAGCAATGACAAGAATCTCTACCATTCTGCATCCAGTGATCCCATCCAAAATCATCGTCGTGTTGATGGTCTCAAACCGTCAGATAAGACAAAGAATGATAACAACAATGACATCATTGAAGAAACAAAAAGTTGCACTCTCTGGATATCCATAAAAGTTCAGCCACTGTTGCTTATGGATTATCACAGCTCATTCAGCATTTTATCTATGACTTATGAGCCAAAGATTGAAGACAAAGCAACTCATGCATATACGACACTAACAGTAGAATCTCAGTTTCGAAAAGTAAAGGGCTTTGAACCACTTGAACATCTAGCCAGTCACGCTCACCTTGATCATGATCCCAATGTCACAGTTCTCTCACCCAGGATTTGCAGGTAA 3384 42.02 MVFPTSIFTILGVLLLWILIFQGFGSHAQFLPEAEVKALQTISSKLKNLSWNVTRTSCIQGEGFSNGAFPGNQIMRNVSCNCTSTVCHVTIILLKGLNLTGTFPDEFGNLTHLQELDLTRNHINGQLPTSLANAPLVKLSLLGNRLNGSIPKEIGDIGTLEELVLEDNLLTGNLPPNLGNLNRLNRLLLSANNFTGRIPDSFGKLKNLVDFRIDGNGVSGKIPELIGNWINLDRLDIQGTSMETPIPSTISQLKNLTQLRISDLKGSFISFPNLTDLINMEELVLRNCLINGSIPQYIGEMNKLSTLDLSFNHLTGPIPATFQNLIKRKIDFMFLTNNSLSGEVPGWILRSKKNIDLSYNKFSGSTLASCQQSPVNLVASYPPTANHQVPWCLKKDLPCSGKAEYHSLFINCGGTRLRADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDENADYLATNKFGLNVSGLGYNQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYSNDQTFSSLGKRIFDISIQGKLVKKNFNIVEAAGGVGKNFTVEDKNVSVNGSTLEIHLYWAGKGTTAVPDRGVYGPLISAITVTPNFKIDEGGLSAGALAGIIISSCAVLIILVVVFLWMKGYICKKEVPANELSGVDLQTGHFTLKQIKAATNNFDPKSKIGEGGFGPVYKGVLSDGVLIAVKQLSSKSKQGSREFVTEIGMISALQHPNLVKLFGCCVEGNQLLLVYEYMENNSLARALFGREEQRLHLDWRTRKKICLEIARGLAYLHEESRLKIVHRDIKATNVLLDKDLTAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPDLGSKYSSEEAMRMLNIALLCTNPSPTLRPTMSSVVSMLEGNIPVQAPIIKRTASGQDPRFKAFEKLSHDSRSQISSSTFSEEVAEAQKSMLMDGPCTESAVSIDSNDKNLYHSASSDPIQNHRRVDGLKPSDKTKNDNNNDIIEETKSCTLWISIKVQPLLLMDYHSSFSILSMTYEPKIEDKATHAYTTLTVESQFRKVKGFEPLEHLASHAHLDHDPNVTVLSPRICR 1127
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3519505 3531070 + CmoCh04G007110.1 Cmo04g00711 379686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00711 1127 SUPERFAMILY Protein kinase-like (PK-like) 647 947 IPR011009 -
Cmo04g00711 1127 Pfam Protein tyrosine and serine/threonine kinase 667 935 IPR001245 GO:0004672|GO:0006468
Cmo04g00711 1127 Gene3D Ribonuclease Inhibitor 268 376 IPR032675 -
Cmo04g00711 1127 Gene3D Ribonuclease Inhibitor 165 267 IPR032675 -
Cmo04g00711 1127 Gene3D Ribonuclease Inhibitor 34 159 IPR032675 -
Cmo04g00711 1127 SUPERFAMILY L domain-like 75 324 - -
Cmo04g00711 1127 Gene3D - 405 594 - -
Cmo04g00711 1127 Gene3D Transferase(Phosphotransferase) domain 1 740 943 - -
Cmo04g00711 1127 Pfam Leucine Rich Repeat 303 325 IPR001611 GO:0005515
Cmo04g00711 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Cmo04g00711 1127 MobiDBLite consensus disorder prediction 1007 1037 - -
Cmo04g00711 1127 MobiDBLite consensus disorder prediction 1019 1037 - -
Cmo04g00711 1127 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 67 997 - -
Cmo04g00711 1127 Pfam Malectin domain 408 589 IPR021720 -
Cmo04g00711 1127 SMART serkin_6 664 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00711 1127 PANTHER - 67 997 - -
Cmo04g00711 1127 Gene3D Phosphorylase Kinase; domain 1 631 739 - -
Cmo04g00711 1127 CDD STKc_IRAK 670 937 - -
Cmo04g00711 1127 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00711 Cmo-Chr4:3519505 Cmo09g00656 Cmo-Chr9:3288325 0 dispersed
Cmo14g00064 Cmo-Chr14:322454 Cmo04g00711 Cmo-Chr4:3519505 2.03E-104 dispersed
Cmo16g00508 Cmo-Chr16:2450461 Cmo04g00711 Cmo-Chr4:3519505 1.78E-102 dispersed
Cmo04g00711 Cmo-Chr4:3519505 Cmo01g01316 Cmo-Chr1:10421966 6.27E-08 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74243 PF07714 PK_Tyr_Ser-Thr 6.40E-50 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00711 - - csv:101211151 1814.28