Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00757 ATGCTTTCGTCCAGGTTGCATCTAGTCCTGTCTAGGATATGTGTGAAGAATTTGCCTAAGCACATAGATGATCATCGCCTTCGTACCTTGTTCTCTGAGAAAGGAGAGATTACAGATGTTAAGCTCATGCGCACCAAGGATGGGAAGAGCCGGCAATTTGCTTTCATTGGGTTTCGCACGGAACATGAAGCTCAAGAAGCGATACGATACTTCAACAAATCTTTTCTCAACACCCACAGGATTGCTTGTGAGATTGCTTGGAAAGTTGGGGATCCAAAAATTCCCCGACCATGGAGTAAACATTCTAAAGAAGAAAAGGGCACTAAAGATAAGACGGAAGTAGAAGATGACAAAAGTAAAAGTCTCTTGGGATCTAAAAAAGAGGGAGACAACCTTAAATTGCGTATTCAAGATGATGACCCTAAAATTCAAGAGTTTCTTCAAGTGACACAACCTCGGATTAATTCAAAATTGTGGGCAAATGACACTTTGACGGCTCCAGAAGATGGAAAAAGCAAGGAGAAAGCAAGTAAAATGAAAACGGTGGGTGGAAGAAGAATGGAGTTGGTGAATGTTGATGGAGATAAAGCTGAGGAAACGCAAACTGCACTGCATAAAAACCCTGCTCATGATGATAAAATTTCGGATATGGAATATTTTAAAAGCAGGGTGAAGAAAACATGGTCAGATTCAGAGACTAGTGATGTTGACAATAGTGACGAGGATGAGTCTATAAAGAAAAAATTGGAGATAAGGGACGTTCCGATGGTAGATTCCAAATTACCACTAAAAACAAAAGCCAAAGAAGAGGGTCATTCCAATCATTGTGATGCAGATATACTCAACCGGGAGAAATCCTCATCAACTCTGGAAGATAAGAAGGATGAAATGCTGGAGAGTGGTCGACTTTTTGTTCGAAATCTGCCATATGCAGCAACCGAAGAAGAGTTAGAAGAGCACTTCCGAAGATATGGCACTGTCTCAGAGGTACATCTTGTAGTCGATAAAGATACAAGGCGTTCTAAAGGCATTGCTTATATCCTTTACACCGTTCCAGAATCTGCAAAAAGGGCACTTGAAGAATTGGATAATTCAATTTTCCAAGGGCGATTGTTGCACATCATGCCTGCTCAACTAAGGAAAATATCCGAGAAACCAGAGGAAAATATTTTAGAGGGCCAAAGGTCAAAATCCTTCAAGCAGAAAAGAGAGGAAGAGAGAAAAGCATCTGAAGCTAGTGGCAATACAAAAGCATGGAATAGTTTATTCATGCGCCCTGATACGGTGGTTGAAAATATTGCTAGAAAATATGGTGTTAGTAAGGGTGAATTACTGGACGGGGAAGCTGATGACCTTGCTGTACGAGTTGCTTTGGGTGAAACTCAAGTAGTTGCAGAGACAAAGAATGCTCTCACAAATGCTGGAGTAAATGTTGCATCTTTAGAGGAATTTGCTTCTGGTAAAGCTGATGGACACAAAAGGAGCAATCATATTCTTCTTGTGAAAAACTTGCCTTATGGTTCTTCTGAAGGAGAACTTGCAAATATGTTCGGGAAATTTGGGAGTTTAGATAAAATCATCCTTCCACCAACAAAGATATTGGCTTTGGTTATTTTTCTAGAGCCATCTGTAGCTCGCGCTGCCTTTAAAGGTTTGGCATACAAACGTTACAAGGATGCTCCTTTATATTTGGAATGGGCGCCTGACAACATTCTTAGCCACAATCCAATGCCTGGACATGTCAAGGACGAGAAAGTTGGTGAAGGTGATGCTAGGAGGGTGATATTAGAGCAGGCAGTGGAAGGAATATCAGATGTTGATTTTGACCCTGACAGGGTTGAGTCGCGATCTCTTTTTGTCAAGAACCTCAACTTTAAAACGACAGATGAAAGTTTGAGAAAGCATTTTAGTGAAAACATGAAAGAGGGAAGAATATTGAGTGCCAAGGTAAAGAAGCATATAAAAAAAGGACAGCATGTCTCGATGGGTTTTGGATTTTTGGAATTTGATTCGGTGGAGACTGCCACAAGGGTCTGCAGTAACTTGCAGGGAACTGTTTTGGATAGCCATGCCCTCATCTTGCAAATGTGTCATGTCAAGAAGGATGATCAAGGGCAAAGAAAAGTAGATAAGGAAAAGAGTTCGACTAAAATACTTGTAAGAAATGTGGCCTTTGAGGCTACAGGGAAAGATCTAAGACAGCTGTTCAGTCCCTACGGACAGATTAAGAGCTTAAGACTGCCAATGAAGTTTGGAAAACATAGAGGCTTTGCATTTGTGGAGTATGTTACAAAGCAGGAGGCGCAAAATGCATTTCAGGCACTTTCAAACACCCACTTGTATGGTCGGCATCTTGTTTTAGAGAGAGCAAAGGAAGGTGAGACCTTGGAAGAATTGAGGGCCCGAACGGCTGCTCAGTTCAGCAACGATCGCGATAAGTCTCAAAATCCAGTTTTGTCCAAGAAGAGGAAGCAGGTGGATGACTTTGAAGAAGACAGAATGGAGGCGAATACGACGGTAGCCAAAAACTGTCCGTCAGAGATGAAAGCAACATCAAATGGAGTATTTCAGGGCGACAATCCGCTAGATTTCGCTCTTCCTTTGGCAATTCTTCAGATATGTTTGGTAGTCATTCTTACTCGCGTTCTTGGTTTGCTTTTCCGACCACTCAGACAACCTCGTGTCGTTGCAGAGATCGTTGGCGGAATATTGCTGGGACCATCAGCGGTGGGTCGGAGCCATGAATTTCTACACGCAGTGTTCCCAGAGAGAAGCCTAACAATGTTGGACACGTTGGCCAATCTGGGTCTGCTCTTCTTCTTATTTCTCGTTGGGCTCGAGCTGGATCCGAAGTCCCTCCGCCATACCGGAAAGGCCGCCATGGGCATCGCCGTCGCCGGAATCACCCTCCCCTTCCTCCTCGGCATCGGCACCTCCTATGTCCTCCGTTCCACCATCTCCCAAGGCGTCCATGCCCCTCCCTTCCTTATATTCATGGGCGTAGCTCTCTCCATCACCGCCTTCCCTGTCCTGGCCCGTATTCTGGCCGAGCTCAAGCTTTTAACCACTAACGTCGGCCGTATGGCTATGTCCGCCGCCGCTGTCAACGATGTCGCCGCCTGGATCTTCCTCGCTCTCGCCATCGCCCTCTCCGGTACTGGCAGCTCCCCTCTCGTCTCCCTCTGGGTCTTCCTCTTTGGGTTTGCTTTTGTCCTGTTCTGCTTCTTCACTCTGCCGCCCATTTTCCGGTGGATGTCCAGTCGCTGCTCCGACGGCGAACCCATCAGCGAACTCTATATTTGCGCTACCTTATCCATCGTCCTCGCCGCCGGTTTCTTCACCGATTTAATCGGAATTCACGCCCTCTTTGGCGCCTTCGTTGTCGGCGTTCTTGTACCAAAAGACGGCCCACTAGCCGGCGCTCTCGTCGAGAAAGTCGAAGGTCTGGTCTCCGGTCTCTTCCTCCCTCTTTATTTCGTTTCTAGCGGATTGAAAACCAACATCGCCACCATCAAAGGCGCCCAATCGTGGGGTCTCCTCGTTCTCGTCGTTTTCACCGCTTGTTTCGGGAAAGTCCTGGGCACCATCGCCGTCGCACTCTTCTGCAAAATGCCACTCCAGGAATCAATCGCTTTAGGATTCTTGATGAACACGAAAGGGCTCGTGGAATTAATCGTCCTCAACATCGGGAAAGACAGAAAAGTTCTGAACGATCAAACTTTTGCAATTCTCGTTCTAATGGCTATCATCACAACCTTCATCACAACCCCAATCGTGATGGCGGTTTACAAACCGGCAAAGAGAAAAAGCAAATCTGAATACATAAACAGAACAATTGAGCGTGAGGATCCCAATTCAGAGCTGCGGATTTTGGCCTGTTTTCACTCTGTTACCAACATTCCTTCGGTTTTAAACTTGATTGAGGCGTCTCGTGGGGCGGAAGGAAAAGAATGGGTTGGGCGCCGGGTTTGCGTTTATGCTATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCCATTTTTATGGTCCACCGAGCTCGGAAGAATCAGCTTCCGTTCTGGAATAAAGGGGGGAAGGCTGATTCCGATCAAATCGTGGTGGCTTTTGAGGATTTTGGGCAGCTTAGTCGGGTGTCTATACGTCCAATGACGGCCATATCTCCACTATCTAGCATTCATGAAGATGTCTGCAACAGCGCCGAGCGGAAACGAGCAGCCATTATCATCCTCCCATTCCACAAACACCAAAGGTTTGATGGATGTTTGGAGACAACACGAGGCGATTTCCAATGGGTCAATCAAAAAGTTCTCGAACAACCACCTTGCTCTGTTGGGATCTTGGTCGACCGAGGATTTGGAGGTGGGTCTCACATCAGCGCTAGCAACGTCTCTTCCACCATAACCATCTTCTTCTTCGGCGGCCGTGACGACCGTGAAGCACTAGCCTACGGTCGGAGAATGGCCGAACATCCCGGAATAACGCTAAACGTTATCCGCTTCCTTCCAAGCCCCGACATGGTGGTAGAATCCATTGTAGTTGACATTAACAAATACGACACAAATGATGTTTCAGCAGGCACAGATGAGAGGGTACTGTCGGAGTTGAAGATGAAGAAAACAGAGGAGAAGTCGATTAAATATGAAGAGAGGGTTGTGAGCAATAGCTGCGACGCCATTGATGTAATGAGGGAGTTTGGTAGATGCCATTTGATATTGGTGGGTCGAATGCCAGAAGGGCGAGTAGTGGAGAGCTTTCATTTGAAGAGTGTAGAATGTCCTGAGTTGGGGCCAATTGGGAGCTTGTTCACATCGCCAGAGCTCCTCACATCAGCATCCCTGTTGGTGATTCAACAGTTTCGTGGCGTATGTCCGGCACCGATGAAGGCCACTTCAAATGGTGTTTTTCAAGGCGATAATCCTCTGAATTATGCGCTTCCTCTCGCCATCCTTCAGATCTGTCTCGTCGTCCTTCTCACTCGTGCTCTCTCTTTTCTTCTCCGGCCAATTCGACAGCCTCGTGTCATTGCTGAGATCGTCGGCGGAATCTTGCTGGGTCCATCGGCGTTTGGCCGGAACTTGAACTACTTACACACAATCTTTCCGGCGAAGAGCCTCACCGTATTGGATACGTTGGCCAACTTGGGTCTTCTCTTCTTCCTCTTTCTCGTCGGCTTGGAGTTGGACCTAAAATCGCTCCGCCGTACCGGAAAACGAGCAATGTGCATCGCCTTAGCTGGAATCACCCTCCCGTTCATCATCGGCATCGGTACTTCCATCATTCTCCGATCAACCATTTCCAAAGGTGTTAATGAAGCCGCTTTTCTTGTCTTCATGGGTGTCGCTCTTTCAATCACTGCATTTCCCGTTCTGGCGAGAATTTTGGCTGAGCTCAAGCTTTTGACCACTGACGTCGGTCGCATGGCCATGTCAGCTGCCGCTGTCAATGACGTGGCGGCGTGGATTCTTCTAGCGTTGGCAATTGCACTCTCCGGCACTGGCAACTCCCCTCTTGTTTCCGTTTGGGTTTTCTTGTCTGGCTCTGGTTTTGTCCTGTTTTGTATCTTTTTCTTTCCGCCGGTGTTCCGGTGGATGTCGCAACAGTGCTCTGAGGGTGAGCCGGTGAAGGAACTGTACATTTGTGCCACTTTGTCGATTGTTTTGGCTGCTGGGTTCGTCACGGATTTGATCGGAATCCATGCCCTGTTCGGAGCTTTCATCATAGGAGTTCTGGTTCCTAAAGAAGGCCCATTCGCCGGAGCTCTGGTTGAGAAAGTTGAAGATCTCGTCTCTGGTCTTTTTCTTCCATTATACTTCGTTTCAAGCGGATTAAAAACAAACGTGGCAACAATTAAAGGAGCTCAATCATGGGGTCTTCTTGTTTTAGTCATTTTCAACGCCTGTTTTGGTAAAATCGTCGGAACTGTTTCTGTTGCCATGTTCTGCGAAGTTCCATTACAAGAATCATTGGCTTTGGGGTTTTTGATGAACACGAAAGGCCTAGTCGAATTAATCGTTCTAAACATCGGCAAAGATAGAAAGGTTCTGAACGATCAGACATTTTCGATTATGGTTCTAATGGCGATCTTCACAACGTTCATCACAACTCCAATTGTTATGGCGGTTTACAAGCCGGAGAAAAAACAGAGCAAATCGAATTACGAGTACAGAACACTTGAAAGGGAAGATCCTGATTCCCAGCTCCGGATTCTGGCTTGTTTCCACTCCATCGACAATATTCCGGCGATGATTAACCTAATTGAGGCCTCAAGAGGAATAGAAAAGAAAGCAGGTCTCTGTGTTTATGCTTTGCATTTAATGGAGCTAACAGAGAGATCCTCTGCCATTCTTATGGTTCACAAAGCACGAAAAAACGGCGTACCCTTTTGGAATAAAGCTCGGTCCGATTCGCGCCAGATTGTTGTCGCTTTCGAAGCATTCCGGCAGCTCAGCCGGGTCTCAATCCGACCGATGACCGCCATTTCTGCTCTGTCTAATATGCACGAAGATATCTGCAGTAGTGCAGAGAGAAAAAGGGTCGCCATTATAATCCTCCCATTCCACAAGCACCAAAGATTGGACGGATCTCTTGAAACGACGAGGGCTGATTACCGGTTAGTAAACCGAAAAGTTCTGGAACAATCGCCCTGTTCTGTCGGAATTTTGATTGACAGAGGACTCGGCGGAGGGTCCCATGTCTGCGCTAGTAACGTCTGCTCCACTATCGCCGTCTTTTTTTTCGGCGGTCGTGATGACCGTGAAGCTCTGGCGTTCGGGAAAAGAATGGCAGAGCATCCCGGAATCAGCTTGCAGGTCATCCGATTCAGTTTCATCCCCGATTTTACGTCAGAATCCGCCACAGTCAATATAAACAAGGACTCCGCCGTTTTAGACGCCGACGATATGGCGTTGGCGTCAATTGAGTACGAAGAGAGGAAGGTGAGCAAAGGGTGTTCCGCCATTGAAGCAATGAAGGAGTTCAGTAAATGCAATTTGATTCTGGTCGGAAGGATGCCGGAGGGTGAAGTGGTGAGGAGCATCAATATGAACTATTCCGAGGGTTCGGAGCTTGGGCCAATTGGCCGACTGTTAGCATCGCCGCAGTTTTCGACGACCGCTTCCGTGCTGGTGGTGCAAATGTCTTTAATAAAGTGA 7152 46.88 MLSSRLHLVLSRICVKNLPKHIDDHRLRTLFSEKGEITDVKLMRTKDGKSRQFAFIGFRTEHEAQEAIRYFNKSFLNTHRIACEIAWKVGDPKIPRPWSKHSKEEKGTKDKTEVEDDKSKSLLGSKKEGDNLKLRIQDDDPKIQEFLQVTQPRINSKLWANDTLTAPEDGKSKEKASKMKTVGGRRMELVNVDGDKAEETQTALHKNPAHDDKISDMEYFKSRVKKTWSDSETSDVDNSDEDESIKKKLEIRDVPMVDSKLPLKTKAKEEGHSNHCDADILNREKSSSTLEDKKDEMLESGRLFVRNLPYAATEEELEEHFRRYGTVSEVHLVVDKDTRRSKGIAYILYTVPESAKRALEELDNSIFQGRLLHIMPAQLRKISEKPEENILEGQRSKSFKQKREEERKASEASGNTKAWNSLFMRPDTVVENIARKYGVSKGELLDGEADDLAVRVALGETQVVAETKNALTNAGVNVASLEEFASGKADGHKRSNHILLVKNLPYGSSEGELANMFGKFGSLDKIILPPTKILALVIFLEPSVARAAFKGLAYKRYKDAPLYLEWAPDNILSHNPMPGHVKDEKVGEGDARRVILEQAVEGISDVDFDPDRVESRSLFVKNLNFKTTDESLRKHFSENMKEGRILSAKVKKHIKKGQHVSMGFGFLEFDSVETATRVCSNLQGTVLDSHALILQMCHVKKDDQGQRKVDKEKSSTKILVRNVAFEATGKDLRQLFSPYGQIKSLRLPMKFGKHRGFAFVEYVTKQEAQNAFQALSNTHLYGRHLVLERAKEGETLEELRARTAAQFSNDRDKSQNPVLSKKRKQVDDFEEDRMEANTTVAKNCPSEMKATSNGVFQGDNPLDFALPLAILQICLVVILTRVLGLLFRPLRQPRVVAEIVGGILLGPSAVGRSHEFLHAVFPERSLTMLDTLANLGLLFFLFLVGLELDPKSLRHTGKAAMGIAVAGITLPFLLGIGTSYVLRSTISQGVHAPPFLIFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDVAAWIFLALAIALSGTGSSPLVSLWVFLFGFAFVLFCFFTLPPIFRWMSSRCSDGEPISELYICATLSIVLAAGFFTDLIGIHALFGAFVVGVLVPKDGPLAGALVEKVEGLVSGLFLPLYFVSSGLKTNIATIKGAQSWGLLVLVVFTACFGKVLGTIAVALFCKMPLQESIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPIVMAVYKPAKRKSKSEYINRTIEREDPNSELRILACFHSVTNIPSVLNLIEASRGAEGKEWVGRRVCVYAMHLMELTERSSAIFMVHRARKNQLPFWNKGGKADSDQIVVAFEDFGQLSRVSIRPMTAISPLSSIHEDVCNSAERKRAAIIILPFHKHQRFDGCLETTRGDFQWVNQKVLEQPPCSVGILVDRGFGGGSHISASNVSSTITIFFFGGRDDREALAYGRRMAEHPGITLNVIRFLPSPDMVVESIVVDINKYDTNDVSAGTDERVLSELKMKKTEEKSIKYEERVVSNSCDAIDVMREFGRCHLILVGRMPEGRVVESFHLKSVECPELGPIGSLFTSPELLTSASLLVIQQFRGVCPAPMKATSNGVFQGDNPLNYALPLAILQICLVVLLTRALSFLLRPIRQPRVIAEIVGGILLGPSAFGRNLNYLHTIFPAKSLTVLDTLANLGLLFFLFLVGLELDLKSLRRTGKRAMCIALAGITLPFIIGIGTSIILRSTISKGVNEAAFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGNSPLVSVWVFLSGSGFVLFCIFFFPPVFRWMSQQCSEGEPVKELYICATLSIVLAAGFVTDLIGIHALFGAFIIGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGAQSWGLLVLVIFNACFGKIVGTVSVAMFCEVPLQESLALGFLMNTKGLVELIVLNIGKDRKVLNDQTFSIMVLMAIFTTFITTPIVMAVYKPEKKQSKSNYEYRTLEREDPDSQLRILACFHSIDNIPAMINLIEASRGIEKKAGLCVYALHLMELTERSSAILMVHKARKNGVPFWNKARSDSRQIVVAFEAFRQLSRVSIRPMTAISALSNMHEDICSSAERKRVAIIILPFHKHQRLDGSLETTRADYRLVNRKVLEQSPCSVGILIDRGLGGGSHVCASNVCSTIAVFFFGGRDDREALAFGKRMAEHPGISLQVIRFSFIPDFTSESATVNINKDSAVLDADDMALASIEYEERKVSKGCSAIEAMKEFSKCNLILVGRMPEGEVVRSINMNYSEGSELGPIGRLLASPQFSTTASVLVVQMSLIK 2383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3766475 3784879 + CmoCh04G007570.1 Cmo04g00757 379732

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00757 2383 Gene3D - 1647 2052 IPR038770 -
Cmo04g00757 2383 Gene3D - 868 1273 IPR038770 -
Cmo04g00757 2383 PANTHER CATION/H(+) ANTIPORTER 17 1622 2378 - -
Cmo04g00757 2383 CDD RRM1_MRD1 11 86 - -
Cmo04g00757 2383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 81 IPR000504 GO:0003723
Cmo04g00757 2383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 303 373 IPR000504 GO:0003723
Cmo04g00757 2383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 618 692 IPR000504 GO:0003723
Cmo04g00757 2383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 718 785 IPR000504 GO:0003723
Cmo04g00757 2383 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 499 560 IPR000504 GO:0003723
Cmo04g00757 2383 PANTHER CATION/H + ANTIPORTER 1622 2378 - -
Cmo04g00757 2383 MobiDBLite consensus disorder prediction 94 126 - -
Cmo04g00757 2383 MobiDBLite consensus disorder prediction 804 828 - -
Cmo04g00757 2383 CDD RRM4_RBM19_RRM3_MRD1 497 568 - -
Cmo04g00757 2383 PANTHER CATION/H(+) ANTIPORTER 17 843 1620 - -
Cmo04g00757 2383 SUPERFAMILY RNA-binding domain, RBD 614 793 IPR035979 GO:0003676
Cmo04g00757 2383 Gene3D - 11 106 IPR012677 -
Cmo04g00757 2383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 716 792 IPR000504 GO:0003723
Cmo04g00757 2383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 301 379 IPR000504 GO:0003723
Cmo04g00757 2383 CDD RRM6_RBM19_RRM5_MRD1 716 790 - -
Cmo04g00757 2383 SUPERFAMILY RNA-binding domain, RBD 301 569 IPR035979 GO:0003676
Cmo04g00757 2383 Gene3D - 587 708 IPR012677 -
Cmo04g00757 2383 Gene3D - 210 389 IPR012677 -
Cmo04g00757 2383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 88 IPR000504 GO:0003723
Cmo04g00757 2383 MobiDBLite consensus disorder prediction 385 412 - -
Cmo04g00757 2383 CDD RRM3_RBM19_RRM2_MRD1 302 375 - -
Cmo04g00757 2383 Pfam Sodium/hydrogen exchanger family 874 1258 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo04g00757 2383 Pfam Sodium/hydrogen exchanger family 1654 2037 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo04g00757 2383 SMART rrm1_1 617 695 IPR000504 GO:0003723
Cmo04g00757 2383 SMART rrm1_1 717 788 IPR000504 GO:0003723
Cmo04g00757 2383 SMART rrm1_1 498 565 IPR000504 GO:0003723
Cmo04g00757 2383 SMART rrm1_1 12 84 IPR000504 GO:0003723
Cmo04g00757 2383 SMART rrm1_1 302 375 IPR000504 GO:0003723
Cmo04g00757 2383 Gene3D - 709 818 IPR012677 -
Cmo04g00757 2383 Gene3D - 488 586 IPR012677 -
Cmo04g00757 2383 MobiDBLite consensus disorder prediction 265 293 - -
Cmo04g00757 2383 Coils Coil 819 839 - -
Cmo04g00757 2383 SMART rrm2_1 12 84 IPR003954 GO:0003676
Cmo04g00757 2383 SMART rrm2_1 302 375 IPR003954 GO:0003676
Cmo04g00757 2383 MobiDBLite consensus disorder prediction 385 414 - -
Cmo04g00757 2383 PANTHER CATION/H + ANTIPORTER 843 1620 - -
Cmo04g00757 2383 SUPERFAMILY RNA-binding domain, RBD 12 92 IPR035979 GO:0003676
Cmo04g00757 2383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 497 569 IPR000504 GO:0003723
Cmo04g00757 2383 CDD RRM5_RBM19_like 616 697 IPR034423 -
Cmo04g00757 2383 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 616 699 IPR000504 GO:0003723
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00757 - - K14787 csv:101206406 1353.58
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01324 Cmo-Chr2:7864879 Cmo04g00757 Cmo-Chr4:3766475 3.90E-10 dispersed
Cmo04g00757 Cmo-Chr4:3766475 Cmo16g00617 Cmo-Chr16:3018587 0 dispersed
Cmo16g00618 Cmo-Chr16:3023907 Cmo04g00757 Cmo-Chr4:3766475 1.67E-30 dispersed
Cmo02g00632 Cmo-Chr2:3936732 Cmo04g00757 Cmo-Chr4:3766475 0 transposed
Cmo02g00633 Cmo-Chr2:3939275 Cmo04g00757 Cmo-Chr4:3766475 1.66E-17 transposed
Cmo07g01404 Cmo-Chr7:8064200 Cmo04g00757 Cmo-Chr4:3766475 3.65E-142 transposed
Cmo19g00383 Cmo-Chr19:3792457 Cmo04g00757 Cmo-Chr4:3766475 5.96E-86 transposed
Cmo20g01059 Cmo-Chr20:9767041 Cmo04g00757 Cmo-Chr4:3766475 0 transposed
Cmo16g00616 Cmo-Chr16:3004168 Cmo04g00757 Cmo-Chr4:3766475 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo20g01059 . 10 809 Antiporter Super Family AT2G13620 71.2 0.0e+00 1132.1
Cmo02g00632 . 1 691 Antiporter Super Family AT2G13620 71.0 4.7e-284 974.5
Cmo03g00449 . 75 843 Antiporter Super Family AT3G53720 66.7 8.0e-278 953.7
Cmo07g01023 . 76 755 Antiporter Super Family AT3G53720 57.6 3.8e-219 758.8
Cmo16g00620 . 83 779 Antiporter Super Family AT3G53720 50.7 2.5e-186 649.8
Cmo16g00617 . 83 774 Antiporter Super Family AT3G53720 50.3 1.5e-183 640.6
Cmo04g00757 . 1695 2378 Antiporter Super Family AT3G53720 50.1 1.7e-182 637.1
Cmo16g00620 . 1 797 Antiporter Super Family AT5G41610 68.4 1.2e-305 1046.2
Cmo04g00757 . 838 1626 Antiporter Super Family AT5G41610 66.8 3.0e-299 1025.0
Cmo16g00617 . 1 777 Antiporter Super Family AT5G41610 66.5 9.9e-295 1010.0
Cmo16g00619 . 3 706 Antiporter Super Family AT5G41610 66.9 5.3e-264 907.9
Cmo03g00449 . 8 818 Antiporter Super Family AT5G41610 51.3 6.3e-209 724.9
Cmo04g00757 . 1623 2378 Antiporter Super Family AT4G23700 67.6 3.3e-290 995.0
Cmo16g00617 . 11 796 Antiporter Super Family AT4G23700 64.4 3.4e-287 984.9
Cmo16g00620 . 1 779 Antiporter Super Family AT4G23700 63.8 6.5e-278 954.1
Cmo16g00619 . 3 723 Antiporter Super Family AT4G23700 63.6 1.6e-260 896.3
Cmo04g00757 . 1621 2378 Antiporter Super Family AT3G17630 64.2 3.3e-274 941.8
Cmo16g00617 . 4 796 Antiporter Super Family AT3G17630 62.7 2.8e-273 938.7
Cmo16g00620 . 5 779 Antiporter Super Family AT3G17630 64.0 2.9e-270 928.7
Cmo16g00619 . 3 704 Antiporter Super Family AT3G17630 63.9 4.9e-246 848.2
Cmo03g00449 . 2 808 Antiporter Super Family AT3G17630 51.6 1.7e-206 716.8
Cmo16g00617 . 3 777 Antiporter Super Family AT1G64170 57.9 2.0e-239 826.2
Cmo04g00757 . 1623 2378 Antiporter Super Family AT1G64170 58.0 1.1e-234 810.4
Cmo16g00620 . 10 789 Antiporter Super Family AT1G64170 56.3 1.7e-230 796.6
Cmo16g00619 . 3 706 Antiporter Super Family AT1G64170 58.0 1.0e-214 744.2
Cmo20g01059 . 10 809 Antiporter Super Family AT2G13620 71.2 0.0e+00 1132.1
Cmo02g00632 . 1 691 Antiporter Super Family AT2G13620 71.0 4.7e-284 974.5
Cmo16g00617 . 3 777 Antiporter Super Family AT1G64170 57.9 2.0e-239 826.2
Cmo04g00757 . 1623 2378 Antiporter Super Family AT1G64170 58.0 1.1e-234 810.4
Cmo16g00620 . 10 789 Antiporter Super Family AT1G64170 56.3 1.7e-230 796.6
Cmo16g00619 . 3 706 Antiporter Super Family AT1G64170 58.0 1.0e-214 744.2
Cmo04g00757 . 1623 2378 Antiporter Super Family AT4G23700 67.6 3.3e-290 995.0
Cmo16g00617 . 11 796 Antiporter Super Family AT4G23700 64.4 3.4e-287 984.9
Cmo16g00620 . 1 779 Antiporter Super Family AT4G23700 63.8 6.5e-278 954.1
Cmo16g00619 . 3 723 Antiporter Super Family AT4G23700 63.6 1.6e-260 896.3
Cmo16g00620 . 1 797 Antiporter Super Family AT5G41610 68.4 1.2e-305 1046.2
Cmo04g00757 . 838 1626 Antiporter Super Family AT5G41610 66.8 3.0e-299 1025.0
Cmo16g00617 . 1 777 Antiporter Super Family AT5G41610 66.5 9.9e-295 1010.0
Cmo16g00619 . 3 706 Antiporter Super Family AT5G41610 66.9 5.3e-264 907.9
Cmo03g00449 . 8 818 Antiporter Super Family AT5G41610 51.3 6.3e-209 724.9
Cmo04g00757 . 1621 2378 Antiporter Super Family AT3G17630 64.2 3.3e-274 941.8
Cmo16g00617 . 4 796 Antiporter Super Family AT3G17630 62.7 2.8e-273 938.7
Cmo16g00620 . 5 779 Antiporter Super Family AT3G17630 64.0 2.9e-270 928.7
Cmo16g00619 . 3 704 Antiporter Super Family AT3G17630 63.9 4.9e-246 848.2
Cmo03g00449 . 2 808 Antiporter Super Family AT3G17630 51.6 1.7e-206 716.8
Cmo03g00449 . 75 843 Antiporter Super Family AT3G53720 66.7 8.0e-278 953.7
Cmo07g01023 . 76 755 Antiporter Super Family AT3G53720 57.6 3.8e-219 758.8
Cmo16g00620 . 83 779 Antiporter Super Family AT3G53720 50.7 2.5e-186 649.8
Cmo16g00617 . 83 774 Antiporter Super Family AT3G53720 50.3 1.5e-183 640.6
Cmo04g00757 . 1695 2378 Antiporter Super Family AT3G53720 50.1 1.7e-182 637.1
Cmo17g00938 CST 47 790 Antiporter Super Family AT3G52080 54.1 1.1e-232 803.9
Cmo08g00509 CST 47 790 Antiporter Super Family AT3G52080 54.0 7.1e-229 791.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000528 2 8 3 3 2 4 4 4 4 4 4 4 4 3 3 4 4 5 2 4 4 2 2 3 4 4 2 5 5 5 111
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo04g00757 Cmo_Chr04 FPKM 3.49104 4.159272 0.327575 0.078172 1.13736 0.809769 1.331014 0.0 0.0 0.0