Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00779 ATGGCGCTTAAAGTGTATGTAGATCGAATTTCACAGCCATCTCGCGCTGTGCTGATCTTCTGCAAGGTTAACGGGATTGCTTTTGAGGAGGTGACTGTAACTTTGTCCAAACGCCAACAGTTGACTCCCGAATTCAAAGAGATCAACCCAATGGGAAAGGTTCCCGCCATTGTTGATGGAAGATTTAAGCTGTTCGAGAGTCATGCTATTCTTATCTATCTTTCTTGTGCGTTTCCTGGTGTGGCAGATCACTGGTATCCAGCTGATCTTTCCAGGAGGGCTAAAATTCATTCAGTTCTGGATTGGCATCATTCTAATTTACGCCGTGGTTCAGCTCTTCTTGTATTCAATACTGTTCTAGCACCTTTGTTTGGACGTACTCCAGATCCTCAAGTAGCTTCTGAAGCTGAGATGCTTTTATCCAAGTCGCTTTCGAAAATCGAGTTGGTATGGCTGAAGGGGAATGGGAAGTTTTTGCTGGGTGGCTTTAAACCCTCCATAGCTGATCTTAGCTTGGTTTGTGAAATTACGCAACTACAGCTTTTGGATGAGAAGGATTGGAATCGTATTCTGGGTCCGCACCTGAAAGTGAGGGAGTGGATTGAGAATACTAGAAATGCTACGAACCCGCAATTTGATGAGGTTCATAGGCCTCTCTACAAGCTCAAGACAGACCTTATAAAGCAGGGCTTAAATGAGGCTATGGACTATTTAGAACTAGTTTCCAAACCTCAAGAGCTGAAGTAA 747 43.91 MALKVYVDRISQPSRAVLIFCKVNGIAFEEVTVTLSKRQQLTPEFKEINPMGKVPAIVDGRFKLFESHAILIYLSCAFPGVADHWYPADLSRRAKIHSVLDWHHSNLRRGSALLVFNTVLAPLFGRTPDPQVASEAEMLLSKSLSKIELVWLKGNGKFLLGGFKPSIADLSLVCEITQLQLLDEKDWNRILGPHLKVREWIENTRNATNPQFDEVHRPLYKLKTDLIKQGLNEAMDYLELVSKPQELK 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3893619 3896130 - CmoCh04G007790.1 Cmo04g00779 379754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00779 248 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cmo04g00779 248 Gene3D Glutaredoxin 1 82 - -
Cmo04g00779 248 Gene3D - 83 240 - -
Cmo04g00779 248 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 226 IPR010987 -
Cmo04g00779 248 SUPERFAMILY GST C-terminal domain-like 83 207 IPR036282 -
Cmo04g00779 248 SFLD Glutathione Transferase (cytosolic) 1 230 IPR040079 -
Cmo04g00779 248 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 233 - -
Cmo04g00779 248 CDD GST_N_Theta 3 78 IPR040075 -
Cmo04g00779 248 CDD GST_C_Theta 92 222 IPR040077 -
Cmo04g00779 248 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 233 IPR043377 -
Cmo04g00779 248 SUPERFAMILY Thioredoxin-like 2 87 IPR036249 -
Cmo04g00779 248 SFLD Main.4: Theta-like 1 230 - -
Cmo04g00779 248 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00779 Cmo-Chr4:3893619 Cmo17g01082 Cmo-Chr17:8958042 1.58E-13 dispersed
Cmo16g00640 Cmo-Chr16:3156791 Cmo04g00779 Cmo-Chr4:3893619 5.74E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00779 K00799 - csv:101211608 375.941