Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00808 ATGTGGCAAACTCTGTTTGAAATCGATACTAAGTATGTCCCAATCAAGCCCATTGGACGAGGATCTTACGGTGTGGTGTGTTCTTCTGCCAACCAACAGACCAACGAGAAGGTGGCTATCAAAAAGATTAAAAATGTGTTTGAGAATCGCTTCGAGGCATTGAGAACGCTCAGGGAGATGAAGCTTTTGAGGCACATAAGACATGAGAACGTGATTGCTTTGAAGGATGTGATGATGCCCGCGCATAGAAATAGTTTTAAGGATGTGTATTTAGTTTATGAGCTCATGAACACTGATCTTGATCACATTATCCGATCGTCTCAGCCCCTCTCAAATAATCATGGCAAGTATTTGATGTATCAGTTGCTTTCCGGCTTGCAGTATCTTCATTCAACCAACATTCTTCATCGAGACTTGAAGCCCGGGAACCTCCTCGTCAATGCTAATTGTGATTTGAAGATTTGTGATTTCGGGTTAGCACGAACGAGCAAAGGTCAGGACCAAGCCATGACTGAGTACGTTGTTACTCGCGGGTATCGTGCACTAGAGCTTCTCCTATCCTGCAAGAGCTATGGGACTTCCATTGATGTGTGGTCTGTGGGATGCATCTTTGTTGAGATTTTGGGTCGGACACCGATCTTCCCTGGGACGAATTGCCTCAACCAACTAGAGTTAATCATCGAAGTTCTCGGTAGTCCAAAGGAAGCAGATATCGAGTTTATTGATAACCTAAAGTCCTTTATAAAAGCTATGCCTTCCTCAAAAGGTGTACAATTTTCCGATCAATATCCACAGGCTGAAACTTTAGCTTTGGACTTGCTGCAGAAGATGCTTGTGTTTGATTCGAGGGAGAGAATTACCATTAATGAAGCACTTCAACATCCATACATGTCCGAGCTATACGACACAGCATTCAATCCTACTGATGAGGTTCCCCTCAGTCTCGACATCGACTGA 957 43.68 MWQTLFEIDTKYVPIKPIGRGSYGVVCSSANQQTNEKVAIKKIKNVFENRFEALRTLREMKLLRHIRHENVIALKDVMMPAHRNSFKDVYLVYELMNTDLDHIIRSSQPLSNNHGKYLMYQLLSGLQYLHSTNILHRDLKPGNLLVNANCDLKICDFGLARTSKGQDQAMTEYVVTRGYRALELLLSCKSYGTSIDVWSVGCIFVEILGRTPIFPGTNCLNQLELIIEVLGSPKEADIEFIDNLKSFIKAMPSSKGVQFSDQYPQAETLALDLLQKMLVFDSRERITINEALQHPYMSELYDTAFNPTDEVPLSLDID 318
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 4041084 4042221 - CmoCh04G008080.1 Cmo04g00808 379783
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00808 318 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 317 - -
Cmo04g00808 318 SUPERFAMILY Protein kinase-like (PK-like) 4 303 IPR011009 -
Cmo04g00808 318 ProSiteProfiles Protein kinase domain profile. 12 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00808 318 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 317 - -
Cmo04g00808 318 Gene3D Phosphorylase Kinase; domain 1 2 95 - -
Cmo04g00808 318 Gene3D Transferase(Phosphotransferase) domain 1 96 312 - -
Cmo04g00808 318 Pfam Protein kinase domain 13 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00808 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Cmo04g00808 318 ProSitePatterns MAP kinase signature. 47 150 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cmo04g00808 318 SMART serkin_6 12 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00808 318 ProSitePatterns Protein kinases ATP-binding region signature. 18 42 IPR017441 GO:0005524
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo04g00808 Cmo16g00687 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00808 Cmo-Chr4:4041084 Cmo04g00817 Cmo-Chr4:4071702 0 dispersed
Cmo04g00808 Cmo-Chr4:4041084 Cmo04g00816 Cmo-Chr4:4066522 0 proximal
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74247 PF00069 Pkinase 9.60E-69 CL0016 Cmo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00808 K20537 K20535 csv:101203896 514.612