Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g00819 | ATGGCAACACCCGTCCAGCCACCCAAAGGATTCACGTCAGCTGGGAAACATTATTACTCGATGTGGCAAACTCTGTTTGAAATAGATACTAAGTATGTCCCCATCAAGCCCATTGGACGAGGATCTTACGGTGTGGTGTGTTCTTCTACCAACCAACAGACCAACGAGAAAGTGGCTATCAAGAAGATTAAAAATGTGTTTGAGAATCGCTTCGAGGCATTGAGAACGCTCAGGGAGATGAAGCTTTTGAGGCACATAAGACATGAGAACGTGATTGCTTTGAAGGATGTGATGATGCCCGCGCATAGAAATAGTTTTAAGGATGTGTATTTAGTTTATGAGCTCATGAACACTGATCTTGATCACATTATCCGATCGTCTCAGCCCCTCTCAAATAATCATTGCAAGTATTTGATGTATCAGTTGCTTTCCGGCTTACAGTATCTTCATTCAACCAACATTCTTCATCGGGACTTGAAGCCCGGAAACCTCCTCGTCAATGCTAATTGTGATATGAAGATTTGTGATTTCGGGTTAGCACGAACGAGCAAAGACAAGGACCAAGTCATGACTGAGTACGTTGTTACTCGCTGGTATCGTGCACCAGAGCTTCTCCTATCATGTGACTATGGTACTTCCATTGATGTGTGGTCTGTGGGATGCATCTTTGCTGAGATTTTGGATTGCCTCAACCAACTAGAGTTAATCATCGAAGTTCTCGGTAGTCCAAAGGAAGCAGATATTGAGTTTATTGATAACCTAAAGTCCATAAAATTTATCAAATCTATGCCTTTCTCAACAAAAAGGATACAATTTTCAGATCAATATCCACAAGCTGAACCTTTAGCTTTGGACTTGCTGCAAAAGATGCTTGTGTTTGACCCGAGGAAGAGAATTACTGCTAATGAAGCACTTCAACATCCATACATGTCCGAGCTATACGACACAAAATTCAATTCTACTGATGAGGTTCCCCTCAATCTCGACATTGACGAATCACTTGATGAGCATGAGATCAGAGAAATGATATTGACTGAGATGCTCTATTATCATCCTGAAGCTGCTCCAACGTAG | 1074 | 41.81 | MATPVQPPKGFTSAGKHYYSMWQTLFEIDTKYVPIKPIGRGSYGVVCSSTNQQTNEKVAIKKIKNVFENRFEALRTLREMKLLRHIRHENVIALKDVMMPAHRNSFKDVYLVYELMNTDLDHIIRSSQPLSNNHCKYLMYQLLSGLQYLHSTNILHRDLKPGNLLVNANCDMKICDFGLARTSKDKDQVMTEYVVTRWYRAPELLLSCDYGTSIDVWSVGCIFAEILDCLNQLELIIEVLGSPKEADIEFIDNLKSIKFIKSMPFSTKRIQFSDQYPQAEPLALDLLQKMLVFDPRKRITANEALQHPYMSELYDTKFNSTDEVPLNLDIDESLDEHEIREMILTEMLYYHPEAAPT | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 4076909 | 4078195 | - | CmoCh04G008190.1 | Cmo04g00819 | 379794 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g00819 | 357 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 11 | 355 | - | - | |
Cmo04g00819 | 357 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 315 | IPR011009 | - | |
Cmo04g00819 | 357 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 336 | - | - | |
Cmo04g00819 | 357 | SMART | serkin_6 | 32 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00819 | 357 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 154 | 166 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo04g00819 | 357 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 11 | 355 | - | - | |
Cmo04g00819 | 357 | ProSitePatterns | Protein kinases ATP-binding region signature. | 38 | 62 | IPR017441 | GO:0005524 | |
Cmo04g00819 | 357 | ProSitePatterns | MAP kinase signature. | 67 | 170 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cmo04g00819 | 357 | ProSiteProfiles | Protein kinase domain profile. | 32 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00819 | 357 | Pfam | Protein kinase domain | 33 | 310 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo04g00819 | 357 | Gene3D | Phosphorylase Kinase; domain 1 | 19 | 344 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00816 | Cmo-Chr4:4066522 | Cmo04g00819 | Cmo-Chr4:4076909 | 0 | dispersed | |
Cmo04g00819 | Cmo-Chr4:4076909 | Cmo16g00687 | Cmo-Chr16:3402841 | 0 | dispersed | |
Cmo04g00817 | Cmo-Chr4:4071702 | Cmo04g00819 | Cmo-Chr4:4076909 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74250 | PF00069 | Pkinase | 4.00E-68 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g00819 | K20537 | K20535 | csv:101203896 | 576.244 |