Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00821 ATGGCTCCGTCAACAAGCTTTCTCTTTGTTTTTGTTCTTCTTGCTCTGTCTTCGGTTTGTTTCTCTCACAGACCTGGCGGCGGCAATGGATATGGCGGTTATTTGTATCCTCAATTCTATGACCATTCTTGTCCAATGGCTCAAGACATTGTGAAGTCCATTGTGGCTAAGGCTTTTGCTAAGGAACCTCGGATTGCTGCTTCATTGATTAGGCTTCATTTCCATGATTGTTTTGTCAAGGGCTGTGATGCTTCACTGTTGTTAGATAGCAGTGGGAAAATTGCTAGCGAAAAAAGGTCCAATCCAAATAGAAACTCTGCTAGAGGATTTGAAGTGATTGATGAGATTAAATCTGCCTTAGAAAAAGAGTGTCCACAAACTGTTTCTTGCGCTGATATTTTGGCCATTGCTTCAAGAGACTCCACCGTCATAGTAAGGCTTCTAACTTTTGCAGGACTAGTCAGTCCTCCAAACAACACATTCCAAACCATTCTCACAAGATTCATGAGACAGGGCCTTGATATTGTTGATCTTGTTGCTCTTTCAGGAAGCCACACTATTGGAAACTCTCGATGCACTAGCTTCAGGCAACGGCTTTACAACCAATCTGGCAATGCTGAGCCTGACCCTTCACTCGATCCATCGTACGCTGCTGAATTGCTCGGACGATGCCCGAGATCAGGGGGTGATCAGAACCTATTTTTCTTGGACTTTGTCAGCCCGACCAAATTTGACAACTATTACTTCAAGAACCTTTTGGCTGGAAAGGGTTTGCTAAACTCAGATCAAGTCCTCTTGACAAAGAACCAACAATCAGCGGAGTTGGTGAGGACATATGCAGAGAATTCAGAGCTCTTTTTTGAGCAATTTGCTAAGTCCATGGTTAAGATGGGGAACATTTCTCCTCTCACAGGTTCAAGGGGTGAGATCAGAAAGAACTGCAGGAGAGTAAACAAAAATTAG 963 43.51 MAPSTSFLFVFVLLALSSVCFSHRPGGGNGYGGYLYPQFYDHSCPMAQDIVKSIVAKAFAKEPRIAASLIRLHFHDCFVKGCDASLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIASRDSTVIVRLLTFAGLVSPPNNTFQTILTRFMRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAEPDPSLDPSYAAELLGRCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAGKGLLNSDQVLLTKNQQSAELVRTYAENSELFFEQFAKSMVKMGNISPLTGSRGEIRKNCRRVNKN 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4084751 4086094 + CmoCh04G008210.1 Cmo04g00821 379796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00821 320 ProSiteProfiles Plant heme peroxidase family profile. 34 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 Gene3D - 298 318 - -
Cmo04g00821 320 CDD secretory_peroxidase 37 317 IPR033905 GO:0004601|GO:0042744
Cmo04g00821 320 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 Gene3D - 38 146 - -
Cmo04g00821 320 Gene3D Peroxidase, domain 2 155 297 - -
Cmo04g00821 320 SUPERFAMILY Heme-dependent peroxidases 35 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 Pfam Peroxidase 51 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PANTHER PEROXIDASE 5 318 - -
Cmo04g00821 320 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Cmo04g00821 320 PANTHER PEROXIDASE 72-RELATED 5 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo04g00821 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00743 Cmo-Chr3:6291134 Cmo04g00821 Cmo-Chr4:4084751 1.02E-151 dispersed
Cmo04g00821 Cmo-Chr4:4084751 Cmo19g00456 Cmo-Chr19:5523601 2.72E-96 dispersed
Cmo02g00465 Cmo-Chr2:2484099 Cmo04g00821 Cmo-Chr4:4084751 4.78E-81 transposed
Cmo16g00692 Cmo-Chr16:3420984 Cmo04g00821 Cmo-Chr4:4084751 6.06E-64 transposed
Cmo16g00691 Cmo-Chr16:3419492 Cmo04g00821 Cmo-Chr4:4084751 1.15E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00821 K00430 - csv:101223204 513.842