Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00838 ATGTTTCATCCACTGCTCATACTCTGTTTTCTCCCATCTCTTTTGGCTCTCTTCCTCTTCCTGATTCTGCTTCGGAGGAAGAGAAATGTCGTCGATCTTCCTCCCGGGAACATGGGATGGCCGTTTCTCGGTGAGACCGTCGGGTATCTCCGCCCATACTCCGCCACCACCATCGGAGATTTCATGAAGAATCATATCACCAGATATGGTAAAGTGTATAAGTCGAACCTGTTCGGAGAGCCGACGGTGGTGTCGGCCGATGCTGGACTGAACCGGTACATACTGCAGAACGAAGGACGGCTGTTTGAATGTAGCTACCCGAGGAGCATCGGCGGGATCCTTGGGAAATGGTCGATGCTGGTTACGGTCGGCGACATGCACCGGGATATGAGAATGATATCGCTCAACTTTCTGAGCCAGAGTAGGCTTAAGACTCATCTCTTGAAGGAGGTTGAGAACCAGACTCTGCTCGTCCTTCGTTCTTGGAAAGATTCCTCAACGTTTTTGGCGCAGGACGAAGCCAAAAGGTTCACTTTCAATTTGATGGCGAAACACATCATGAGTTTGGATCCGTGGAAGTTGGAGACGGAGATGTTGAAGAAGGAGTATGTTACTTTCATGAAAGGAGTGATTTCTCCGCCACTGAATCTACCAGGAACGCCGTACAGAAGAGCTTTGAAGTCTCGGTCGACGATCTTGAAGTTCATCGAGCGGAAAATGGAGGAACGGAGGTTGAAAATAGAAGCCGATGGCGGAGAGTTCGAGGAAGACGATCTACTCGGCTGGGCATTGAATCACTCAAATCTCTCGACGGAGCAAATCCTCGACTTGATTCTTAGCCTACTCTTTGCCGGCCACGAGACATCGTCGGTCTCCATAGCTTTAGCCATCTTCTTCCTCTCCGGCAGCCGAGCCACCGTCCAACAGTTGACGGAAGAACACCTGGAGATCGCCAGAGGCAATAAACGATTGGGAAAGGCGGAATTGGATTGGGAAGATTACAAGAAAATGGAATTCACGCAATGTGTGATTAACGAGACGCTTCGGCTTGGAAACGTGGTGAGATTTCTTCACAGAAAGGCACTGAAGGATGTACGGTACAGAGGTTATTTCATTCCACGTGGATGGAAAGTGCTGCCTGTGATATCTGCAGCGCATTTGGATCCTTCAGTTTTTTACCAACCTCACAACTTTAATCCATGGAGGTGGCAGCAAATGAATGGATTGCCATCGAGTGCGACGATAACCAATAACTTCATGCCATTTGGAGGCGGACCGCGACTATGCACTGGTTCAGAACTAGCCAAGCTTGAAATGGCCATTTTTATTCATCATTTGGTCTTGAACTACGAATGGGAATTGGTGGGTTCAGATCAACCTTTTGCTTACCCTTTTGTTGACTTCCCTAAAGGTCTGCCAATCAGGATCCGCCACCACACTCTCGTGTAA 1449 48.72 MFHPLLILCFLPSLLALFLFLILLRRKRNVVDLPPGNMGWPFLGETVGYLRPYSATTIGDFMKNHITRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPRSIGGILGKWSMLVTVGDMHRDMRMISLNFLSQSRLKTHLLKEVENQTLLVLRSWKDSSTFLAQDEAKRFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRRALKSRSTILKFIERKMEERRLKIEADGGEFEEDDLLGWALNHSNLSTEQILDLILSLLFAGHETSSVSIALAIFFLSGSRATVQQLTEEHLEIARGNKRLGKAELDWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDPSVFYQPHNFNPWRWQQMNGLPSSATITNNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYEWELVGSDQPFAYPFVDFPKGLPIRIRHHTLV 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4170265 4174315 - CmoCh04G008380.1 Cmo04g00838 379813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00838 482 Pfam Cytochrome P450 34 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 SUPERFAMILY Cytochrome P450 29 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 Gene3D Cytochrome P450 24 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g00838 482 PANTHER CYTOCHROME P450 90B1 16 456 - -
Cmo04g00838 482 PANTHER CYTOCHROME P450 26 16 456 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00838 Cmo-Chr4:4170265 Cmo04g02798 Cmo-Chr4:20108482 6.61E-121 dispersed
Cmo08g01269 Cmo-Chr8:7988253 Cmo04g00838 Cmo-Chr4:4170265 4.58E-16 dispersed
Cmo04g00838 Cmo-Chr4:4170265 Cmo04g01189 Cmo-Chr4:6085173 1.26E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00838 K09587 - csv:101211854 873.233