Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00869 ATGATGGTGGAGTTCCATGGAGAAATCCCAGAAGACTCTCACGATGGAGACGAAGAACAGGAAGAGGAAATTAGCTACGATGATCTTAAGAAACGAATGTGGAAAGACAGACAGAGGTTGAAGAAGATGAAGGAGAACCGTGATCATGAAGAGTTTGAATGGGCGGCCAGAGAAGAAGCTTCTCGCCGGAAGAAAATGTCCAGAGCTCAAGATTCGATTCTCAAGTACATGGATAAGATAATGGAGTCTTGTAAGGCACAAGGGTTTGTTTACGGGATCGTGCCGGAAAAGGGTAAACCGATCACCGGCTCTTCTGAGAGCCTCCGTGACTGGTGGCAGGACAAGGTTCGGTTTGAACAGGATGCTCCACTGAACATCGCGAATTTACTTCCGAGAGTGATCGAAGAAGCGGGGCTCGATACCAAATCGTTTCTGCACCTACTCCAAGAATTGCAGGACACGACTTTAGGGTCGATTCTGTCGGCTCTGATGCAGCACTGTATTCCGCCGCAGAGGAAATTCCCATTGGACAAAGGTCTGGCGCCGCCTTGGTGGCCGACGGGAAAGGAGCTTTGGTGGGGCGAACAAGGCGTCGCCGGTGGGCAGGGCGTTCCACCATATAAAAAGCCTCATGATCTCAAGAAGTCCTGGAAAATCAGTGTCCTTGCGGCGGTGATTAAACACATGTCTCTTGATTTGGACAACATGAGGAAATTGGTTCGACAATCGAAGAATTTACAGGCGAAAATGACGGCGAAAGAGACGATTACTTGGACTAAGGTCGTGAATCAAGAAGAAGCTCTCTTGCAATTGACCAAAAACAGCCTCAAAATAACATCCGACGAAGAAGATCAAGAACAACACCACCAAAACAGAGGACCCGAAAACAGGGCAGAACAAGGCACCGGCGGGATTATTACGAAACGGAAGTGCGAATTCGAACGAGAAGCCACAGCTGATTCAGCGGTGTATGCTTGCCAGAACGAATGGTGCCCACAGAGCGAGGCGCCAAAGGGGTTCGCCGACAAGAACGCGAGAACAGAGCACGAGACGCAGTGCGTTTACAGAGCCGACGGCGTGGGGCAGTTTTCTAACGAGCAGTCGATCGACACGCATTTGATGAGCGTGGTGGAGTGGATGAGCTGGGAGCTGTCGAGGGCAGAGCCGAGCAGCAGCGAGTCGAGGATCGATGACGGCGGATATGGGTCGGGTAGCAGCACAGTGGATGGCAGTGGGTATTGGAAGGGCAGCATCGGAGAGGTAGGGGTGGATGGGTCGGGTAGCAGCACGGTGGAGGATTATGGCAGTGGGTATTGGAAGGGCGGGATTGGAGAGGCAGCGGTGGATGGGTCGGGTAGCAGCACGGTGGATGATTATGGGAGTGGGTTTTGGAAGGGCGGCATCGGAGAGGCAGCAGTGGACGAGGCGTTTGAGATGCATAGAGAGAGTATGGATTTGAATGCGAGTCCGGCGGCGGACGATTTGCAATGCCAACAAGATGCAACTTCGATTTGGGATTTGAGATATGAATGGAGTGAAGAGTGA 1545 51.97 MMVEFHGEIPEDSHDGDEEQEEEISYDDLKKRMWKDRQRLKKMKENRDHEEFEWAAREEASRRKKMSRAQDSILKYMDKIMESCKAQGFVYGIVPEKGKPITGSSESLRDWWQDKVRFEQDAPLNIANLLPRVIEEAGLDTKSFLHLLQELQDTTLGSILSALMQHCIPPQRKFPLDKGLAPPWWPTGKELWWGEQGVAGGQGVPPYKKPHDLKKSWKISVLAAVIKHMSLDLDNMRKLVRQSKNLQAKMTAKETITWTKVVNQEEALLQLTKNSLKITSDEEDQEQHHQNRGPENRAEQGTGGIITKRKCEFEREATADSAVYACQNEWCPQSEAPKGFADKNARTEHETQCVYRADGVGQFSNEQSIDTHLMSVVEWMSWELSRAEPSSSESRIDDGGYGSGSSTVDGSGYWKGSIGEVGVDGSGSSTVEDYGSGYWKGGIGEAAVDGSGSSTVDDYGSGFWKGGIGEAAVDEAFEMHRESMDLNASPAADDLQCQQDATSIWDLRYEWSEE 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4343817 4345361 - CmoCh04G008690.1 Cmo04g00869 379844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00869 514 Pfam Ethylene insensitive 3 27 266 IPR006957 GO:0005634
Cmo04g00869 514 MobiDBLite consensus disorder prediction 1 25 - -
Cmo04g00869 514 MobiDBLite consensus disorder prediction 279 295 - -
Cmo04g00869 514 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 13 510 IPR006957 GO:0005634
Cmo04g00869 514 Gene3D - 138 276 IPR023278 GO:0003700|GO:0005634
Cmo04g00869 514 Gene3D - 55 133 IPR023278 GO:0003700|GO:0005634
Cmo04g00869 514 Coils Coil 26 46 - -
Cmo04g00869 514 MobiDBLite consensus disorder prediction 279 304 - -
Cmo04g00869 514 PANTHER ETHYLENE INSENSITIVE 3-LIKE 5 PROTEIN 13 510 - -
Cmo04g00869 514 SUPERFAMILY DNA-binding domain of EIN3-like 145 269 IPR023278 GO:0003700|GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00869 Cmo-Chr4:4343817 Cmo10g01026 Cmo-Chr10:5388347 8.53E-110 dispersed
Cmo16g00750 Cmo-Chr16:3765531 Cmo04g00869 Cmo-Chr4:4343817 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9574 PF04873 EIN3 4.50E-106 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00869 K14514 - csv:116406094 669.077