Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00916 ATGCCAAGCCGATGCGCCTATGGGACGCCTCCACAGGACAGCTCCCACTCTGCTTTTGATACCTCCAAGAATCATGTTTTCGCTGTTGAATTTGACAGTAAGCAGGATGATTGGGACTCGAGTGACAATCATATAGGAATCAATATCAATTCCATTAATTCTACTCGTCATCTTGTGTGGAACACCAGCATGAAGGATAACCGAACAGCCAATGCCTGGATAACTTACAATTCCTTCACTAAAAATTTGTCTGTCTATCTAACTTATGTTAAAGATCCTGTATTTACTAGAAATGTTAGCATCTCAACTACTGTTGACTTGAAAAGTTTATTGCCTGAAAGGGTCAGAATTGGATTCTCCGCCGCTACGGGGAACTGGTTCCAAATACATAACATCATTTCTTGGACCTTCGACTCAACCTTGGAAGATAATATTGTAGGTGGAGGTGGAGGTGGAGATAACAATAAAAATATTGGTTTGGCCATTGGCCTAGGTGTTGGGCTTGGTGTTTTGATATGTGGGTTGAGTTTGTTCGGATTTCTTTGGTGGAGGAAACAATTGAGAAGCAGAATGGAAGATGTGGAAGATCTTATGGATGATGAGTTTGAAAGAGGAACTGGCCCAAAAAGGTTCACTTATAGGGAATTAACTCACGCCACAAAGAATTTTGATGAGGCCGGCAAGCTTGGAGAAGGAGGGTTTGGAGGTGTTTACAAGGGTTTGTTAACCGAATCAGATACAGAAATCGCGCTCCTCGGTTGGTGCCATGAACGAGGTGATTTCCTTTTGGTTTATGAGTTCATGCCCAATGGCAGCCTGGATACTCACCTCTTCAAAGGTAAAACCATGCTAACTTGGGAAGTTAGATACAAAATAGCAGTAGGTTTGGCTTCTTCTTTGCTATATCTTCACGAAGAATGGGAACAATGTGTGGTGCATAGAGATATCAAATCCAGCAATGTAATGCTGGACTCTAATTTCAACGCCAAACTCGGGGATTTCGGGCTTGCAAGGTTTGTGGATCATGAGATGGGCTCACAAACTACTGTTCTGGCTGGCACCATGGGGTATCTAGCCCCAGAGTGTGTGACGGATGGCAAGGCAAGTAAGGAATCAGATGTTTACAGTTTTGGTGTGGTTGCTCTTGAGATTGCCTGTGGACGGCGGCCAGTAGAAGCAAGAGCGGAACCTGATCAAGTGAGGCTTGTGGAGTGGGTGTGGGGGATGTATGGCAGAGGCCAAGTCCTAGAAGCTGCAGACAAGAGACTGGCAATGGACTTCGATGAGCAACAAATGGAGAGTTTGATGGTGGTGGGATTATGGTGCTGCCACCCTGACTTCAAGATGCGGCCCTCCATAAGACAGGTGATTAATGTTCTAAATGTTGAAGCTCCACTGCCCGCCCTGCCTTCAAAGTTACCCGTGCCGATGTACTTTGCGCCGCCGTTGAATTTATGCAAGTTAACGTACACATCAACAGGTTCCACCGAGACGCCAGTGGATAGAAGTGAGTGTTCATGTAGTACTTGTTCGACTTGCACCACAGAATCATCCGGATCAAATGAAGTTGAGATTCCTGAAGAACTTGTCGATGTCTCTGTTCGTGTCGTGCGGGACCCGGGCAATCTTGGTACATTAATCAGGTCTGCTTTGGCCTTCAAATGGAATGGTGTGTTTCTGCTTCCTGGGTGTTGTGATCCATTCAACGAGAAGGCACTCCGAGGCTCACGTGGAGCATCTTTTCAGCTTCCAATAGTCTCTGGCACTTGTACATGGTGCAGGCTGAAAACGGTTGCGGACTTCACCACCCACTTCTCCTTTAGAATCAACACACTTAACCAAACTGTATTCGGTGATGGCCTAGCCTTCTTCATCGTCCCTTACAATTCCACAATCCCACCTAACTCAACAGGGGGTTTTCTTGGATTATTCAGCAACGACTCTGCTTTTGATACCTCCAAGAATCAAGTTTTGGCTGTTGAATTTGACAGTAAGCAGGATGATTGGGACTCGAGTCAAAATCATATAGGAATCAATATCAATTCCATTAATTCTATTCGTTTTCTTAATTGGAGCAGCAGCATGAAGGATAACCGACTAGCCAATGCCTGGATAACATACAAATCCTCCACTAAAAAGTTGTCTGTGTATCTAACTTATGATGAAGATCCGATTTTTACTGGAAATTTTAGCATCTCAGCTTCTGTTGACTTGAAAAGTTTATTGCCTGAAAGGGTCAGAATTGGGTTCTCCGCCGCTACGGGGAACTGGGTCCAAATACATAACATCATTTCTTGGAACTTCAATTCAACCTTGGACGATAATACTGGAGGTGGAGGTGGAGGTGGAGATAAAAATAAAAATATTGGTTTGGCCATTGGCCTAGGTGTTGGGCTTGGTGTTTTGATATGTGGGTTGAGTTTGTTCGGATTTCTTTGGTGGAGGAAAAAGTTGACAAGGAGAATGGAAGATGTGGAAGATCTTATGGATGATGAGTTTGAAAGAGGAACTGGCCCAAAAAGGTTCACTTATAGGGAATTAGCTCAAGCCACAAAGAATTTTGATGAGGCCGGCAAGCTTGGGGAAGGAGGGTTTGGAGGTGTTTACAAGGGTTTGTTAACCGAATCAGATACAGAAATCGCGGTAAAGAGGGTTTCCAGAGGATCAAGACAGGGGAAAAAAGAGTACGTATCCGAAGTGAAGATTATAAGTCGTTTGAGGCATAGGAATCTTGTTCAGCTCCTCGGTTGGTGCCATGAACGAGGTGATTTCCTTTTGGTTTATGAGTTCATGCCCAATGGTAGCCTGGATACCCACCTCTTCAAAGGTAAAACCATGCTAACTTGGGAGGTTAGATACAAAATAGCAGTAGGTTTGGCTTCTTCTTTGCTATATCTTCACGAAGAATGGGAACAATGTGTGGTGCATAGAGATATCAAATCCAGCAATGTAATGCTGGACTCTAATTTCAACGCCAAACTCGGGGATTTCGGGCTTGCAAGGTTTGTGGACCATGAGATGGGCTCACAAACTACTGTTCTGGCTGGCACCATGGGGTATCTAGCACCAGAGTGTGTGACGGATGGCAAGGCCAGTAAGGAATCAGATGTTTACAGTTTTGGCGTGGTTGCTCTTGAGATTGCCTGTGGACGGCGGCCAGTAGAAGCAAGAGCGGAACCTGACCAAGTGAGGCTGGTGGAGTGGGTGTGGGGGATGTATGGCAGAGGCCAAGTCCTAGAAGCTGCAGACAAGAGACTGGAAATGAACTTCGATGAGCAACAAATGGAGAGTTTGATGGTGGTGGGATTATGGTGCTGCCACCCTGACTTCAAGATGCGGCCCTCCATAAGACAGGTGATTAATGTTCTAAATGTTGAAGCACCACTGCCCGCTCTGCCTTCAAAGTTACCCGTGCCGATGTACTTTGCACCGCCGTTGGATTTATGCAAGTTTACGTACACATCGACAGGGTCCACCGAGACGCCAGTGGATAGAAGTGAGTGTTCATGTAGTAATTGTTCGACTTACACCTCAAAATCATCAGGATTAAAAGATGCTCCAAATGGTGTTTTGTAG 3576 45.19 MPSRCAYGTPPQDSSHSAFDTSKNHVFAVEFDSKQDDWDSSDNHIGININSINSTRHLVWNTSMKDNRTANAWITYNSFTKNLSVYLTYVKDPVFTRNVSISTTVDLKSLLPERVRIGFSAATGNWFQIHNIISWTFDSTLEDNIVGGGGGGDNNKNIGLAIGLGVGLGVLICGLSLFGFLWWRKQLRSRMEDVEDLMDDEFERGTGPKRFTYRELTHATKNFDEAGKLGEGGFGGVYKGLLTESDTEIALLGWCHERGDFLLVYEFMPNGSLDTHLFKGKTMLTWEVRYKIAVGLASSLLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKLGDFGLARFVDHEMGSQTTVLAGTMGYLAPECVTDGKASKESDVYSFGVVALEIACGRRPVEARAEPDQVRLVEWVWGMYGRGQVLEAADKRLAMDFDEQQMESLMVVGLWCCHPDFKMRPSIRQVINVLNVEAPLPALPSKLPVPMYFAPPLNLCKLTYTSTGSTETPVDRSECSCSTCSTCTTESSGSNEVEIPEELVDVSVRVVRDPGNLGTLIRSALAFKWNGVFLLPGCCDPFNEKALRGSRGASFQLPIVSGTCTWCRLKTVADFTTHFSFRINTLNQTVFGDGLAFFIVPYNSTIPPNSTGGFLGLFSNDSAFDTSKNQVLAVEFDSKQDDWDSSQNHIGININSINSIRFLNWSSSMKDNRLANAWITYKSSTKKLSVYLTYDEDPIFTGNFSISASVDLKSLLPERVRIGFSAATGNWVQIHNIISWNFNSTLDDNTGGGGGGGDKNKNIGLAIGLGVGLGVLICGLSLFGFLWWRKKLTRRMEDVEDLMDDEFERGTGPKRFTYRELAQATKNFDEAGKLGEGGFGGVYKGLLTESDTEIAVKRVSRGSRQGKKEYVSEVKIISRLRHRNLVQLLGWCHERGDFLLVYEFMPNGSLDTHLFKGKTMLTWEVRYKIAVGLASSLLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKLGDFGLARFVDHEMGSQTTVLAGTMGYLAPECVTDGKASKESDVYSFGVVALEIACGRRPVEARAEPDQVRLVEWVWGMYGRGQVLEAADKRLEMNFDEQQMESLMVVGLWCCHPDFKMRPSIRQVINVLNVEAPLPALPSKLPVPMYFAPPLDLCKFTYTSTGSTETPVDRSECSCSNCSTYTSKSSGLKDAPNGVL 1191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4601387 4609363 + CmoCh04G009160.1 Cmo04g00916 379891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00916 1191 ProSitePatterns Legume lectins beta-chain signature. 658 664 IPR019825 -
Cmo04g00916 1191 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 646 IPR013320 -
Cmo04g00916 1191 SUPERFAMILY Concanavalin A-like lectins/glucanases 596 772 IPR013320 -
Cmo04g00916 1191 Gene3D Transferase(Phosphotransferase) domain 1 268 480 - -
Cmo04g00916 1191 Gene3D Transferase(Phosphotransferase) domain 1 931 1143 - -
Cmo04g00916 1191 PANTHER - 249 516 - -
Cmo04g00916 1191 CDD lectin_legume_LecRK_Arcelin_ConA 20 141 IPR001220 GO:0030246
Cmo04g00916 1191 Gene3D Phosphorylase Kinase; domain 1 208 251 - -
Cmo04g00916 1191 Gene3D Phosphorylase Kinase; domain 1 839 930 - -
Cmo04g00916 1191 SUPERFAMILY Protein kinase-like (PK-like) 207 478 IPR011009 -
Cmo04g00916 1191 PANTHER RECEPTOR LECTIN KINASE 597 1179 - -
Cmo04g00916 1191 PANTHER RECEPTOR LECTIN KINASE 249 516 - -
Cmo04g00916 1191 ProSitePatterns Protein kinases ATP-binding region signature. 860 883 IPR017441 GO:0005524
Cmo04g00916 1191 CDD lectin_legume_LecRK_Arcelin_ConA 597 772 IPR001220 GO:0030246
Cmo04g00916 1191 ProSiteProfiles Protein kinase domain profile. 854 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00916 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Cmo04g00916 1191 Coils Coil 184 204 - -
Cmo04g00916 1191 ProSiteProfiles Protein kinase domain profile. 140 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00916 1191 SUPERFAMILY Protein kinase-like (PK-like) 838 1150 IPR011009 -
Cmo04g00916 1191 CDD STKc_IRAK 868 1124 - -
Cmo04g00916 1191 ProSitePatterns Legume lectins alpha-chain signature. 742 751 IPR000985 -
Cmo04g00916 1191 Coils Coil 815 835 - -
Cmo04g00916 1191 Pfam Protein kinase domain 856 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00916 1191 Pfam Protein kinase domain 249 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00916 1191 PANTHER - 20 250 - -
Cmo04g00916 1191 PANTHER - 597 1179 - -
Cmo04g00916 1191 ProSitePatterns Legume lectins alpha-chain signature. 111 120 IPR000985 -
Cmo04g00916 1191 Gene3D - 587 778 - -
Cmo04g00916 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 974 986 IPR008271 GO:0004672|GO:0006468
Cmo04g00916 1191 Pfam SpoU rRNA Methylase family 536 586 IPR001537 GO:0003723|GO:0006396|GO:0008173
Cmo04g00916 1191 Pfam Legume lectin domain 20 142 IPR001220 GO:0030246
Cmo04g00916 1191 Pfam Legume lectin domain 596 774 IPR001220 GO:0030246
Cmo04g00916 1191 SMART serkin_6 223 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00916 1191 SMART serkin_6 854 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g00916 1191 PANTHER RECEPTOR LECTIN KINASE 20 250 - -
Cmo04g00916 1191 Gene3D - 8 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00916 Cmo-Chr4:4601387 Cmo16g00798 Cmo-Chr16:4065597 0 dispersed
Cmo04g00913 Cmo-Chr4:4592346 Cmo04g00916 Cmo-Chr4:4601387 1.26E-100 proximal
Cmo04g00914 Cmo-Chr4:4595091 Cmo04g00916 Cmo-Chr4:4601387 1.07E-26 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74256 PF00069 Pkinase 5.20E-50 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00916 - - csv:101218663 959.518