Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00936 ATGGCGATTACCAAGGTGAAAGAGCCAGTTTGTGTGACCGGAGCCAATGGGTTCATCGGATCTTGGGTCATCGGTACGCTGTTGGAAGCCGGTTACACTACCATTCATGCCTCGATCTTCCCCGGCTCCGATGCTTCCCATTTGATCAATCTCCAGGCCTCCGCTAACCCTAATGCTACCCTTCGGATTTTCGAAGTGAACGTAATGGACGGCGAGGCTGTGGCCAGGGCTGTGGAAGGCTGCAAGGGCGTATTCCACATTGCGTCACCCTGCACGCTGGAGGATCCTATTGATCCACAGAAAGAATTGGTGGAGCCGGCAGTGAAAGGCACTCTTAATGTTCTTGAGGCTGCGAAGAAACTTGGGGTACGGCGCGTTGTTCTTACTTCTTCTATTTCGGCTCTTGTTCCCAACCCTGGCTGGCCATCCGACAAGCCATTTGATGAATCGTCGTGGACAGACCTGGAGTACTGCAAATCGCGAAAGAAATGGTATCCAGTGTCAAAAACATTAGCAGAGAAAGCAGCATGGGAGTTTGAAGAGAAGCATGGATTGGATGTAGTTTCCATCCTGCCTGCCACATGTCTTGGTCCTCTCCTGCAACCAAATTTGAATGCAAGCTGTGCTGTGTTGCAGCAGTTGCTCCAAGGATCAAAGGACAGTCAGGAGTATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAATATTGTTGTTCGAGTCTCCCACTGCTTCTGGTAGATATCTCTGCACCAATGGTATCTATCAATTTGCCGATTTTGCCGACGAAGTCTCGAAAATCTACCCTGAATTTCCTGTTCACAGATTTGTGGGAGAAACACAACCCCACTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTGATTGATCTGGGACTTATCTTCACCCCTCTTGAAGTTGCAATTCGAGATACGGTTGAGAGCCTTAGAAGCAAAGGTTTTCTGAAGCAGTGA 984 48.98 MAITKVKEPVCVTGANGFIGSWVIGTLLEAGYTTIHASIFPGSDASHLINLQASANPNATLRIFEVNVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVKGTLNVLEAAKKLGVRRVVLTSSISALVPNPGWPSDKPFDESSWTDLEYCKSRKKWYPVSKTLAEKAAWEFEEKHGLDVVSILPATCLGPLLQPNLNASCAVLQQLLQGSKDSQEYHWLGAVHVKDIAKAQILLFESPTASGRYLCTNGIYQFADFADEVSKIYPEFPVHRFVGETQPHLVACKDAAKRLIDLGLIFTPLEVAIRDTVESLRSKGFLKQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4726613 4729460 - CmoCh04G009360.1 Cmo04g00936 379911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00936 327 CDD FR_SDR_e 10 303 - -
Cmo04g00936 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 320 IPR036291 -
Cmo04g00936 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 313 - -
Cmo04g00936 327 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 313 - -
Cmo04g00936 327 Gene3D - 3 327 - -
Cmo04g00936 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00936 Cmo-Chr4:4726613 Cmo13g00035 Cmo-Chr13:227262 8.82E-107 dispersed
Cmo04g00936 Cmo-Chr4:4726613 Cmo14g01074 Cmo-Chr14:5943038 7.29E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00936 - - cmo:103493282 588.956