Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00986 ATGTCGATGGCCGCCACCTCCACCGCCATCCTCCGCCCCACCCCTTTTCTCGGCCAAAACAGAGCCCCTTCCAATAACTCCCTCAGAGATGTCGTCGCCATGGGAACTCCAAAATACACCATGGTCCCGACCCCTTTCGGAAATGAACTGTGGTATGGACCAGACAGAGTCAAGTACTTGGGGCCGTTTTCCGCTCAGACTCCCTCCTACTTGAACGGAGAGTTCCCCGGCGATTATGGATGGGACACTGCTGGGTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTAATCCACGGGAGGTGGGCGATGTTGGGAGCCTTCGGGTGCATAACACCAGAGGTGCTAGAAAAATGGTTGAAAGTGGACTTCAAGGAGCCAGTCTGGTTCAAGGCCGGAGCCCAGATCTTCTCAGAAGGGGGGCTCGACTACTTGGGGAACCCCAACCTGGTGCACGCCCAGAGCATCCTAGCCGTTTTGGGTTTCCAAGTGGTCCTAATGGGGCTGGTTGAAGGGTTCCGCATCAACGGGCTGGACGGCGTGGGCGAAGGCAACGACCTGTACCCGGGGGGTCAGTACTTCGACCCACTCGGACTGGCCGACGACCCCGTCACCTTCGCCGAGCTGAAGGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGTTCGGGTTCTTTGTCCAGGCCATCGTGACTGGGAAAGGCCCCCTCGAGAACCTTCTGGACCATCTCGATAACCCTGTGGCCAACAATGCTTGGGTTTACGCCACCAAGTTTGCCCCTGGCTCATAA 810 58.02 MSMAATSTAILRPTPFLGQNRAPSNNSLRDVVAMGTPKYTMVPTPFGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4982617 4983898 - CmoCh04G009860.1 Cmo04g00986 379961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00986 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Cmo04g00986 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Cmo04g00986 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 269 IPR001344 GO:0009765|GO:0016020
Cmo04g00986 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 3 269 - -
Cmo04g00986 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00986 Cmo-Chr4:4982617 Cmo13g00573 Cmo-Chr13:6475233 6.22E-120 dispersed
Cmo04g00986 Cmo-Chr4:4982617 Cmo16g00863 Cmo-Chr16:4590539 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00986 K08914 - mnt:21401705 510.76