Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01012 ATGATCCAAGAGCCTGCTGGCATGCAATTCCCAATGCTCTGCCCCAGAGATTTTATCTCTGTTTCCCTTTTTATTTCTCTTCTTCTTGTTTCCAATTTATCTCCCTGTTCCGCACAAGACTACATCATAGGCGACCCCGGAGCAGCTGGCGGAGCAGGCGGCGGAGCAGTCGGCGGAGATGCTGGCGATGATACCAAGGAGAAGCCGGCGGCGGGACCGCCAGAGCACAACAACTGTAATGGCATATACTTGACCTACAATTTCATTTCGCGTGAGAAGGAGCTGCCCCGGTTAAAGAATGCGACGGCTCAGGCTTGGGCCTTCAAATCGGAGGCGACAATTCTGAACTCCGGATTGACTGAGCTCAAGGGCTGGAAGATGTTCATCGGATTTCACCACCACGAGATTCTCGTCTCCGTCGACGGCGCCGTCCTGTTGGATGGCTCCGATTTCCCTGCGGACGTTGGAAAAGGAGTCACTTTGGCTGGGTATCCGATGACCGATCTTAAAACGTCCATTGAAACCGCCGGTGATATTAATCAGATCCAAGTGACGGCTGCGATCACCGGATCACAATTTGGCATCAAGCCCCCTGGTGTTCCAATGCCTAAGACAATTCGCCTCGTTAACGATGGATATAAGTGCCCTGCCCCTCGTCTTCGTGGGAAAAGAACAATGCATGTGTGCTGCAAAAAAGATCCAAAGTTCAAGGAGAAAAAAGCACCCAAGGCCAAGAAAATCAAATTTCTGGCTAGGCAAAATGGAGATCTCTCGCTAACGTACGATGTGATGCAATCTTTTGGAAACAACTACCTAGCTCAAGTCACAATCGACAACAACAACCCACTGGGGCGCTTGGATCACTGGAACTTAACCTGGGAATGGATGAAAGGAGAGTTCATTCAAAGCATGAGAGGAGCATACACTCATACAAGAGACATAGCTCAATGCGTCTACGGCCCCGCAGGCCAATACTATCAAGATTTCGACTTCACCGGCGTCATGAGTTGCGATAAGAACCCGGTGATGGCCGATCTACCAGCGCAACGGAAGGACGATCCCAAGATCGGAAAGTTGCCATATTGCTGCAGGAATGGAAGCTTGTTGCCTACCATGATGGATGAAAGCAAAGCAAGGTCTATTTTTCAGCTACAAGTCTTCAAGCTTCCACCAGACATGAACCGAACGGCTCTTACTCCACCACAGAAATGGAAAATCTCAGGTATCCTAAATCCGGAATACGAATGTGGTGCTCCGATCCGAGTCGTACCGACCGAGTTTCCAGACCCAAGCGGGCTTCAATCAACGAGCACGGCGATCGCTAGTTGGCAAGTTGTATGCAACATTACAAAGCCAAAAGTGAAGCAATCAAAATGTTGTGTTTCGTTCTCAGCATATTATAATGACTCAGTAATTCCTTGCAATACTTGTGCGTGTGGGTGTGAAGACACTGATACTTCTAGTTGCAATCCAAATGCACGCTCAATGCTGCTGCCTCCAGAAGCCCTTTTGGTGCCATTTGATAACAGGACAAAGAAGGCAAGGGCTTGGGCTAAAATTAAGCACTACCCAAATCCAAAGACGATGCCTTGTCCTGATAACTGTGGAGTTAGTCTGAATTGGCATATTAACTCCGACTATGCCGATGGATGGACTGCAAGACTCACACTTTTCAACTGGGAAGATTACCCATTTGAGGATTGGTTCACTGCCGTTCAATTGGGTAAGGCCGGCCGGGGTTACGAAAATGTTTACTCCTTCAATGGAACCAAGCTTCCCAACGTTAAAAATACCATCTTTCTCCAAGGCTTGCCTGGCTTGACTTACTTGATGGGAGAGGTGAATGGGACCAATCCCACATCGGATCCGAGAATTCCAGGAAAGCAGCAGTCCGTGATCTCTTTTAAGAAGAAGGGCCTGCGCGACTTGGACATACAACGAGGTGATGGCTTCCCTATTAAAGTGTTTTTCAACGGCGAGGAATGTGCGCTTCCAAGGGCGATTCCCTTGCCCAGTTCTGCCTGCCGCTGTCCCTATGGTGTCATGCGCCTCGTCTTCATCTTGGCTGTTACTTTGGCGCTTATAACAGATCGCTTCCATTGA 2103 48.88 MIQEPAGMQFPMLCPRDFISVSLFISLLLVSNLSPCSAQDYIIGDPGAAGGAGGGAVGGDAGDDTKEKPAAGPPEHNNCNGIYLTYNFISREKELPRLKNATAQAWAFKSEATILNSGLTELKGWKMFIGFHHHEILVSVDGAVLLDGSDFPADVGKGVTLAGYPMTDLKTSIETAGDINQIQVTAAITGSQFGIKPPGVPMPKTIRLVNDGYKCPAPRLRGKRTMHVCCKKDPKFKEKKAPKAKKIKFLARQNGDLSLTYDVMQSFGNNYLAQVTIDNNNPLGRLDHWNLTWEWMKGEFIQSMRGAYTHTRDIAQCVYGPAGQYYQDFDFTGVMSCDKNPVMADLPAQRKDDPKIGKLPYCCRNGSLLPTMMDESKARSIFQLQVFKLPPDMNRTALTPPQKWKISGILNPEYECGAPIRVVPTEFPDPSGLQSTSTAIASWQVVCNITKPKVKQSKCCVSFSAYYNDSVIPCNTCACGCEDTDTSSCNPNARSMLLPPEALLVPFDNRTKKARAWAKIKHYPNPKTMPCPDNCGVSLNWHINSDYADGWTARLTLFNWEDYPFEDWFTAVQLGKAGRGYENVYSFNGTKLPNVKNTIFLQGLPGLTYLMGEVNGTNPTSDPRIPGKQQSVISFKKKGLRDLDIQRGDGFPIKVFFNGEECALPRAIPLPSSACRCPYGVMRLVFILAVTLALITDRFH 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5083733 5086072 + CmoCh04G010120.1 Cmo04g01012 379987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01012 700 PANTHER COBRA-LIKE PROTEIN 7 26 699 - -
Cmo04g01012 700 MobiDBLite consensus disorder prediction 53 76 - -
Cmo04g01012 700 Pfam COBRA-like protein 271 450 IPR006918 GO:0010215|GO:0031225
Cmo04g01012 700 PANTHER COBRA-LIKE PROTEIN 10 26 699 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01012 Cmo16g00909 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01012 Cmo-Chr4:5083733 Cmo06g01549 Cmo-Chr6:10904370 0 dispersed
Cmo16g00909 Cmo-Chr16:5447441 Cmo04g01012 Cmo-Chr4:5083733 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01012 - - cmax:111492051 1394.79