Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01061 ATGAAACTGATGGTAATGAGGTACTCTCCATTCTTCTTCGTCTTGTTGTTCTGTGTACTGCCTCTGGTTCGGGCTGGAGATGAAGAAGCTCTGTTAGCACTGAAAGAATCTCTCGACCCTGGGAACTCGCTTCCATGGCGAGGAAGCTCTGTCTGCCACTGGCAAGGCGTGAAAGAGTGCAAGAATGGGCGGGTAACTAAGCTTGTTTTAGAGCATCTAAATCTCTCTGGCGTTCTTAACCACAAGATTTTGAATCGTTTAGATCAGCTTCGTGTTCTCAGTTTCAAAGGAAATTCACTCTCTGGCCGAATCCCTGATCTCTCAGGTCTTGTTAATCTCAAATCCCTCTATCTTAACGACAACAACTTTTCCGGCGAGTTCCCGAGCTCCATCTCCGATCTCCATCGCTTGAAGGTCATTGTTCTTTCCGGTAATCAAATATCTGGCCCCATTCCAGACTCGCTGCTCAAACTCCGGCGTCTCTATGTCCTACACCTGCAGGACAACCAACTCACCGGCTCCATCCCACCTTTCAACCAAACCAGTCTCCGATTCTTCAATGTCTCTAACAATCACCTCTCCGGCGACATCCCAGAAACCCCCGCCTTGCTCCGCTTCAATGTCTCGTCATTTTCCGGCAACCTGGAACTTTGCGGAAAACAAGTTCAAAACCCCTGTGGAAATATTGCCATTGCGCCATCATTAAGTCCCTCTTATTCACAAATCCTGAGCTCAAGCTCGTCTTCAAGACACAAAAAAATGGTCAGGATAATAGCAGGAAGCGTTGGTGGGTTTGTCGGGCTGCTATTAATCGTTCTTTTATTGTGTATGATTTGCAAATGTAGGGAAAGAGAGAGCCTAGCGGAAGTTAGAAACAAAGGAATCGGCGACGAGGGGATGGGGATGGGGATGGAGGAAACATCTGGAACTGCCGGCGGGAGCAGAGAAGTTAATAACGGGGGAAAGCAAGGGGGATTTTCATGGGAAAGTGAAGGACTAGGGAGTCTAGTGTTCTGCGGAGCAGGGGATCAGAAAATGACTTATAGCTTGGAAGATCTGTTGAAAGCTTCGGCGGAGACTTTGGGCAGAGGGACCATCGGAAGCACATACAAGGCAGTGATGGAATCTGGGTATATTGTGACGGTGAAGCGGCTGAAGGATGCAAGGTACCCACGAGCAGAGGAATTCGGACGGCAGATGGAAGTTCTTGGGCGGCTCAGACACCCCAACTTGGTCCCTCTCAGGGCCTACTTCCAGGCTAAGGAGGAACGCCTTCTCGTATACGATTATTTCCCCAATGGCAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGCGGAGGAAAGCCTCTTCATTGGACATCCTGCCTCAAAATAGCTGAAGACTTGGCCAGTGGTCTACTCTACATCCACCAGAACCCAGGCTCAATACATGGAAACCTCAAATCCTCAAACGTACTATTAGGATCGGATTTCGAGTCGTGTCTTACTGATTATGGTCTTAACTTATTTCGAGATCCAGATTCGCTCGAAGAACCTAGTGCAACTTCGCTCTTTTACCGAGCTCCCGAATGCCGCGACATCCGTAAGCCAACCACACAACAAGCAGACGTTTATAGTTTTGGTGTTCTTCTGTTGGAGCTTCTTACAGGAAAAACACCCTTCCAAGATCTTGTTCAAGAACATGGCTCCGACATTCCCAAGTGGGTTAGCTCAGTTAGAGAAGAGGAGACGGAGTCTGGGGATGATCCCACGTCTGGGAATGAGGCATCGGAAGAGAAACTTCAAGCTCTTTTGAACATAGCAATGGCTTGTGTTTCACTTATGCCGCAGAACCGACCTACAATGAGGGATGTACTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATATCATCCAACAGTAGTGATCATTCACCAGGGAGATGGTCTGATATTGTCCAGAGTTTGCCCAGGGAAGAACATTTAAGCATTTGA 1983 47.96 MKLMVMRYSPFFFVLLFCVLPLVRAGDEEALLALKESLDPGNSLPWRGSSVCHWQGVKECKNGRVTKLVLEHLNLSGVLNHKILNRLDQLRVLSFKGNSLSGRIPDLSGLVNLKSLYLNDNNFSGEFPSSISDLHRLKVIVLSGNQISGPIPDSLLKLRRLYVLHLQDNQLTGSIPPFNQTSLRFFNVSNNHLSGDIPETPALLRFNVSSFSGNLELCGKQVQNPCGNIAIAPSLSPSYSQILSSSSSSRHKKMVRIIAGSVGGFVGLLLIVLLLCMICKCRERESLAEVRNKGIGDEGMGMGMEETSGTAGGSREVNNGGKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDARYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLASGLLYIHQNPGSIHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKPTTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVSSVREEETESGDDPTSGNEASEEKLQALLNIAMACVSLMPQNRPTMRDVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5308080 5313711 + CmoCh04G010610.1 Cmo04g01061 380036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01061 660 ProSiteProfiles Protein kinase domain profile. 355 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g01061 660 Gene3D Transferase(Phosphotransferase) domain 1 431 646 - -
Cmo04g01061 660 MobiDBLite consensus disorder prediction 570 591 - -
Cmo04g01061 660 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Cmo04g01061 660 SUPERFAMILY Protein kinase-like (PK-like) 359 633 IPR011009 -
Cmo04g01061 660 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Cmo04g01061 660 Gene3D Phosphorylase Kinase; domain 1 338 430 - -
Cmo04g01061 660 Gene3D Ribonuclease Inhibitor 180 228 IPR032675 -
Cmo04g01061 660 Pfam Protein kinase domain 358 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo04g01061 660 MobiDBLite consensus disorder prediction 631 660 - -
Cmo04g01061 660 Pfam Leucine rich repeat N-terminal domain 26 57 IPR013210 -
Cmo04g01061 660 SUPERFAMILY L domain-like 34 215 - -
Cmo04g01061 660 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 11 650 - -
Cmo04g01061 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 650 - -
Cmo04g01061 660 MobiDBLite consensus disorder prediction 631 645 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01061 Cmo18g01016 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01061 Cmo-Chr4:5308080 Cmo07g00705 Cmo-Chr7:3176990 4.27E-159 dispersed
Cmo04g00033 Cmo-Chr4:212885 Cmo04g01061 Cmo-Chr4:5308080 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74263 PF00069 Pkinase 5.40E-36 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01061 - - csv:101209119 1142.1