Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01118 ATGGAGGGGGCTGTAATTAGTGGTTTCGTGTCGGTTTTCCCGGCCGCGATTGCGGTGGCGGTGGTGGCGGTGTTGGTCCATTTGTACTTCAATAGTGCATGGAGGAAGACGGCGGAGCTGAGGAGGAAGCTGCGAGAACAGGGCGTGATGGGTCCGCCACCGTCGGTTCTGTTTGGTAACTTGCCGGAGATGAAGAAGATCCAGTTGGAGGCAGCGGCTATGGCTTCTCCGCCGCGTCATGCGTCGGCGATTGTAGCTCATGATTATACATCCACCCTCTTCCCTTGTTTAGTTAAGTGGAGGAAGCAATATGGTCCATTATACACATACTCGACCCGGACGAAGCAGCATTTGTACACCACCAAGGTGGAGATAGTGAAGGACTTGACACTCTTCAACAATCTCAACTTGGGCAAGCCCTTGTTCATCAACAAAAGGAACGCTCCCCTCTTTGGCCACGGCATCACCACCACCAACGGCTCCCTTTGGGTGCTGCAGCGCAAGATCATCGCCCCCGAGTTCTTCATGGACCGGGTCCAAGGCATGGTGGCACTGATGGCTAAGGCGGGGTCATCCTTGATAGAGAAATGGGAGGCGAGGATCGGAGATGGATCCATGGTGGAGATTGAAGTGGATGGGGATCTCAAAGAATACTCGGCCGACGTGATAGCTAGAGCTTGCTTTGGGAGCTCGTATGAGAAGGGGAAAGAGATTTTCACGAAGATTAGGGATCTTCAGAAGTTGCTTTCCGAGGAGAGCATTCTAGTTGGTTCCATTCCTTTAAGTGACAAATTTTTTAAACCAAGCAAACACAGAAGAATCAAAAAGCTGGAAAAGGAGATCAACTCATCAATATGGGAGACGGTTCAACAGCGCCGAGAACAGTGCTCCAAAACCTCCTCGTCTGACAAGGATCTGTTGCAGCTGATAATGGAGGCCGCCATGACTGAGTCAAGTTTACCAGCCAAACAGTCCTCCAAAAACTTCATCGTTGACAACTGCAAGACCATGTATTTCGCCGGCCATGAAACCACCGCCGTCGCCGCCGCCTGGTCCTTGATGCTCCTCGCCCTCCATCCCGATTGGCAAGACCGTATCCGCTCCGAGTTTGCTCACACTTGCCCCGATGGTCGCTTTGACATGACGTTGATTTCTCAACTCAAATCGGTGAGTTTGGTGGTTCAAGAAACGTTGCGACTGTACCCGCCGGGCGCATTTGTAGCAAGGGAGACACTTGATGAGGTACGACTTGGGAACGTGGTCATTCCAAAGGGTGTCTGTATATGGACTTCGATACTGACACTACACAGAGACATTGAAATATGGGGAGAAGATGCGAATGAGTTCAAGCCAGAACGGTTTGCGGATGGTATATCCAAGGCTTGCAAGATCCCACAACTCTACCTTCCCTTTGGGGCAGGTCAACGATTGTGCTTGGGGAAGAACTTTGCATTGGTTGAGTTGAAGATCATAATTTCTCTTATAGTTTCTAAGTTTAGATTCTCGCTATCTCCTCAGTATTGTCATTCTCCTTCTTATAATCTGATCGTGGGGCCTTCAAACGGCGTGAAGATTCTACTTCAAAGGGTTTGA 1593 50.16 MEGAVISGFVSVFPAAIAVAVVAVLVHLYFNSAWRKTAELRRKLREQGVMGPPPSVLFGNLPEMKKIQLEAAAMASPPRHASAIVAHDYTSTLFPCLVKWRKQYGPLYTYSTRTKQHLYTTKVEIVKDLTLFNNLNLGKPLFINKRNAPLFGHGITTTNGSLWVLQRKIIAPEFFMDRVQGMVALMAKAGSSLIEKWEARIGDGSMVEIEVDGDLKEYSADVIARACFGSSYEKGKEIFTKIRDLQKLLSEESILVGSIPLSDKFFKPSKHRRIKKLEKEINSSIWETVQQRREQCSKTSSSDKDLLQLIMEAAMTESSLPAKQSSKNFIVDNCKTMYFAGHETTAVAAAWSLMLLALHPDWQDRIRSEFAHTCPDGRFDMTLISQLKSVSLVVQETLRLYPPGAFVARETLDEVRLGNVVIPKGVCIWTSILTLHRDIEIWGEDANEFKPERFADGISKACKIPQLYLPFGAGQRLCLGKNFALVELKIIISLIVSKFRFSLSPQYCHSPSYNLIVGPSNGVKILLQRV 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5706645 5709332 + CmoCh04G011180.1 Cmo04g01118 380093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01118 530 PANTHER CYTOCHROME P450 714A1-RELATED 16 525 - -
Cmo04g01118 530 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 Pfam Cytochrome P450 95 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Cmo04g01118 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 525 - -
Cmo04g01118 530 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 SUPERFAMILY Cytochrome P450 88 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01118 530 Gene3D Cytochrome P450 34 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00094 Cmo-Chr4:500120 Cmo04g01118 Cmo-Chr4:5706645 7.43E-32 dispersed
Cmo04g01118 Cmo-Chr4:5706645 Cmo17g00083 Cmo-Chr17:441426 1.63E-158 dispersed
Cmo04g01118 Cmo-Chr4:5706645 Cmo04g01119 Cmo-Chr4:5710970 0 tandem
Cmo04g00093 Cmo-Chr4:495982 Cmo04g01118 Cmo-Chr4:5706645 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01118 K20661 - cmax:111484107 961.444