Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01157 ATGGAAGCTGAAGATCTTCCAGAAGCAAAGACAGCCCTCAGCCTCCTCCGTAGTAGACTTTGCAACACTAGTTTCTACTTCAAGCCTCCATCCGATTCTTCTGATAGCAATTACAGCAAATTGAAGTTTATAATATCCAGTTCGGTGGCTGAAGCGTGCAATAATTCGATCCTGCTTCTCGGCCCTCGGGGTTCAGGGAAAATGGCGGTGCTGGAACTCGTTCTGCAAGATCTATTACTAGAATATCCCGATATGATTACCGTGATAAGGTTGAGTGGCCTTTTGCATTGTGACGACAATGGTGCTTTCAAGGAGATTGCTAGGCAGCTTTGCTCGGAGTATCAATTGTTGTTCTCAAAAATGGCATCCTTCGACGATAACTCCCAGTTTATGATAGCTATGCTACGGGAGTGTGGCTTGGCTCACAAGACAATTGTTTTTGTACTGGATGAATTTGATCTTTTTGCACAAGGGAAACAAAGGTTACTTTATAGTTTGCTAGATGCCATGCAATCAGTGTCATCACAAGCTGTTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTCGAGAAAAGAGTAAGATCTCGTTTCTCCCACAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTGGAGAGATTGCTGGAGCACATTTTAACATTGCCAATCGACTCAGACCTTCCTCACGACTACATTATTAAATTTAATGCAAAGCTTCATAATATGTTAGCTGATGAGAGATTCAAAAAGATCATTAATACTTATTTGGACTCTGATTCGACTGTCAAACAATTAGTGAGATATCTGTTTTGTGCCATATCAAAGATGAACTTGAAATCTGGCATGCTGACTCTTGAGAATTTTGAGCATGCTCTTTCAAATATTCAGAGGCAGCCAAAGCAGGAATGTATAAAAGATTGTTCCATATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTTAAGGAACAGAATTCGTACAACTTCAATTCTGTAATGAAAGAGTACAAAAGCATACACGATTCATTCCAGACGTCTGATTATTATTCGCGAAGCGTATGCTTACGGGCTTTTGAGCACCTTCTACAGCGTGAGTTAATCTGCTTCACTGACAACCGTGGAAATAATCAATCAATTGAATTTCGACCAGTCAAGCTGTTAATATCGTCGCCTGAACTTCATCTTGGACTGAAGGCGTATCGTTCTTGTCCAGTCATCCTTCAGAAATTAATGAATTGA 1257 40.73 MEAEDLPEAKTALSLLRSRLCNTSFYFKPPSDSSDSNYSKLKFIISSSVAEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMITVIRLSGLLHCDDNGAFKEIARQLCSEYQLLFSKMASFDDNSQFMIAMLRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEHILTLPIDSDLPHDYIIKFNAKLHNMLADERFKKIINTYLDSDSTVKQLVRYLFCAISKMNLKSGMLTLENFEHALSNIQRQPKQECIKDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFQTSDYYSRSVCLRAFEHLLQRELICFTDNRGNNQSIEFRPVKLLISSPELHLGLKAYRSCPVILQKLMN 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5899305 5903959 - CmoCh04G011570.1 Cmo04g01157 380132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01157 418 PIRSF ORC4 3 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Cmo04g01157 418 Gene3D - 34 209 IPR027417 -
Cmo04g01157 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 300 IPR027417 -
Cmo04g01157 418 Pfam AAA ATPase domain 39 174 IPR041664 -
Cmo04g01157 418 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 400 IPR032705 -
Cmo04g01157 418 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01157 K02606 - csv:101220845 772.311