Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g01195 | ATGGAGGGAAAGGAGGAAGATGTCCGATTGGGAGCCAACAGGTTCACTGAGAGGCAGCCGATTGGGACAGCGGCACAGAGCCAAGACGACGGCAAGGACTACCAAGAGCCTCCGCCGGCGCCTCTGTTCGAGCCGGACGAGCTCACTTCATGGTCCTTCTATAGAGCCGGAATTGCCGAGTTTTTTGCTACCTTCCTCTTCCTCTACATCACTGTTTTGACCGTCATGGGCGTCGTCCGCTCCAACGAAATTAACGGCAATACCTGTAAGACTGTCGGGATTCAGGGGATTGCTTGGGCTTTCGGTGGTATGATTTTTGCTCTGGTTTACTGTACCGCTGGAATCTCTGGTGGCCACATTAACCCGGCGGTGACTTTCGGGCTGTTTCTGGCGAGGAAGCTATCCTTGACCAGGGCGATTTTCTACATGGTGATGCAGTGTCTAGGCGCCATCTGCGGTGCCGGCGTGGTAAAGGGGTTCCAACCCAAGCCCTACGACAGGCTCGGCGGTGGAGCTAACGTGGTGAGCAAGGGTTACACCAAAGGCGACGGCCTTGGCGCTGAGATTGTGGGCACATTTATCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAACGTAGCGCCAGAGACTCGCATGTTCCAATTTTGGCACCCCTACCAATTGGGTTCGCAGTGTTCCTAGTCCACTTGGCCACCATCCCGATCACCGGCACCGGCATCAACCCAGCTCGGAGTTTGGGAGCCGCCATCATCTACAACAACGAGAAAGCCTGGGATGACCACTGGGTTTTCTGGGTGGGACCCTTCATCGGAGCAGCATTGGCAGCTTTATACCATCAAGTGGTGATCAGAGCCATTCCTTTCAAATCCAAGTGA | 879 | 55.06 | MEGKEEDVRLGANRFTERQPIGTAAQSQDDGKDYQEPPPAPLFEPDELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEINGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQCLGAICGAGVVKGFQPKPYDRLGGGANVVSKGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNNEKAWDDHWVFWVGPFIGAALAALYHQVVIRAIPFKSK | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6109539 | 6110856 | - | CmoCh04G011950.1 | Cmo04g01195 | 380170 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g01195 | 292 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | PRINTS | Major intrinsic protein family signature | 101 | 125 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | PRINTS | Major intrinsic protein family signature | 138 | 157 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | PRINTS | Major intrinsic protein family signature | 187 | 205 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | PRINTS | Major intrinsic protein family signature | 263 | 283 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | Gene3D | Glycerol uptake facilitator protein. | 40 | 291 | IPR023271 | - | |
Cmo04g01195 | 292 | TIGRFAM | MIP: MIP family channel proteins | 59 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | Pfam | Major intrinsic protein | 47 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Cmo04g01195 | 292 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 292 | IPR034294 | - | |
Cmo04g01195 | 292 | ProSitePatterns | MIP family signature. | 119 | 127 | IPR022357 | - | |
Cmo04g01195 | 292 | CDD | MIP | 55 | 283 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo04g01195 | 292 | PANTHER | AQUAPORIN PIP 1-3 | 1 | 292 | - | - | |
Cmo04g01195 | 292 | SUPERFAMILY | Aquaporin-like | 47 | 285 | IPR023271 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g01195 | Cmo04g03037 | CCT | |
Cmo04g00164 | Cmo04g01195 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01195 | Cmo-Chr4:6109539 | Cmo15g01298 | Cmo-Chr15:8913115 | 0 | dispersed | |
Cmo04g01194 | Cmo-Chr4:6106583 | Cmo04g01195 | Cmo-Chr4:6109539 | 0 | tandem | |
Cmo04g01195 | Cmo-Chr4:6109539 | Cmo04g01196 | Cmo-Chr4:6112222 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g01195 | K09872 | - | csv:101214512 | 568.54 |