Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01223 ATGCATCAAAATCTCTGGTGTATAGCTACCACCGGAGCTTCAGCGGCTTTGCAGCCTGGCTCAACCAGGAGGAGGCTCGAAAATTCGCCAGTGGAGATGGATGAAGTTGTTTCCGTGTTTCCCAGCGAAAAGAAACAGCTTCATACAACAAGATCATGGGATTTTATGGGTTTCTTCCAACAAGCTCGAAGATCGAGCTTGGAGAGCGATTTGGTCATCGGAATGTTGGATACTGGAATTTGGCCGGAATCTGAAAGCTTTTCCGATGAAGGGTTTGGTCCACCGCCGCCAAAATGGAAAGGGGAATGCCAACCCGCTTCTAACTTCACCTGCAACAATAAAATAATCGGAGCTCGATTCTTCCGGACCGAACCTCTCGGCGAAGGCGATATTCTTTCTCCGAGGGATACAGAAGGCCATGGAACCCACACCTCATCCACTGCCGGAGGCAATTTGGTCTCCGGCGCCAGCCTCTTCGGCCTTGGTCTCGGCACCGCTCGGGGTGGCACTCCCTCTGCCCGCATTGCCGTCTACAAGATCTGCTGGTCCGATGGTTGCTTCGACGCCGATATCCTCGCGGCTTTCGACAATGCAATCGCCGATGGCGTGGATATCATCTCTCTTTCCGTCGGAGGCTTTATTGCCAAGGATTACTTCAATGATTCAATTGCAATTGGGGCTTTTCACGCGATGAAGAATGGGATTCTGACTTCGAATTCCGGTGGGAACTCTGGCCCTAGCCTTGGCAGTATCACGAATGTTTCTCCATGGTCGCTATCGGTGGCTGCTAGTACCATCGATAGGAAGTTTGTGACGAATGTGAAATTGGGTAATGGAGAATCTTCTCAGGGGATCTCTGTGAACACCTTCCAACTTGGAGATAAGCTGATTCCACTTATATATGCTGGTGATGCTCCTAATACAACTGCCGGTTTCAATGGATCATTATCAAGGTTCTGCTTCCCAGGGTCTTTGGACGTGAACCAAGTTGAGGGAAAGATTGTTCTTTGCGATGAGATTGGCGATGGGGAAGCAGCTCTGAGTAGTGGTGCGGTTGGTACAATAATGCAAGATGGTGGTCTCCAAGATGCCGCCTTTCTTTTTCCCCTGCCCGCTTCCGTGTTAGACTTGAACGCTGGAAACAATGTTTTCCAGTACCTGAGATCAACCAGCAATCCGGAAGCCACCATAGAAAAGAGTACCACAATTGAGGATCTGTCAGCTCCATCTGTTGTTTCCTTCTCATCAAGGGGTCCTAACCTAATTACACTAGACATTCTCAAGCCTGATTTGGCAGCACCAGGAGTGGATATAGTAGCATCTTGGTCTGAAGGTACAACAATTGGAGGCTTAGAAGGGGATAACCGAGTATCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCGACAGGAGCCGCTGCCTATGTCAAATCATTCCACCCAACTTGGTCTCCAGCTGCTATTAAGTCTGCACTTATGACAACAGCTTTTCCCATGGCTCCAAAGTTAAACACGGATGCTGAGTTTGCATATGGAGCAGGTCACATAAACCCAGTGAATGCCATAAACCCCGGCTTAGTGTATGATGCAGAGGAGATTGATTACATAAAGTTCTTATGTGGGCAAGGATATAGTACTCAAAATCTTCGTCTTGTTACCGGAGACGAAAGCAACTGTTCAAATGTTGCAAAAACAGCTGCATCAGATCTAAATTATCCGTCTTTTGGTCTATTAATGAAGTCCCAAAAACTGAATACTCGTGTCTACCACAGGACTGTCACAAACGTGGGGGTGCCAGTGTCGACATATAAAGCAGTTATTCGAGCTCCGCCTGGGCTGGAAGTTACAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAAAAGATGTCGTTCACTGTGAGGGTTAAAGCAAATACTGGTGGGAATATTCTTTCTGGTAGCTTAAGCTGGGAGGATGGAGTGCATCAGGTGAGGAGCCCCATTGTTGCATTTGCCATTCCATCATGA 2025 47.95 MHQNLWCIATTGASAALQPGSTRRRLENSPVEMDEVVSVFPSEKKQLHTTRSWDFMGFFQQARRSSLESDLVIGMLDTGIWPESESFSDEGFGPPPPKWKGECQPASNFTCNNKIIGARFFRTEPLGEGDILSPRDTEGHGTHTSSTAGGNLVSGASLFGLGLGTARGGTPSARIAVYKICWSDGCFDADILAAFDNAIADGVDIISLSVGGFIAKDYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESSQGISVNTFQLGDKLIPLIYAGDAPNTTAGFNGSLSRFCFPGSLDVNQVEGKIVLCDEIGDGEAALSSGAVGTIMQDGGLQDAAFLFPLPASVLDLNAGNNVFQYLRSTSNPEATIEKSTTIEDLSAPSVVSFSSRGPNLITLDILKPDLAAPGVDIVASWSEGTTIGGLEGDNRVSPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMAPKLNTDAEFAYGAGHINPVNAINPGLVYDAEEIDYIKFLCGQGYSTQNLRLVTGDESNCSNVAKTAASDLNYPSFGLLMKSQKLNTRVYHRTVTNVGVPVSTYKAVIRAPPGLEVTVRPATLSFRSLGQKMSFTVRVKANTGGNILSGSLSWEDGVHQVRSPIVAFAIPS 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6205237 6208002 - CmoCh04G012230.1 Cmo04g01223 380198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01223 674 Gene3D - 267 404 - -
Cmo04g01223 674 PANTHER PUTATIVE-RELATED 33 671 - -
Cmo04g01223 674 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 671 IPR045051 -
Cmo04g01223 674 Gene3D Peptidase S8/S53 domain 70 539 IPR036852 GO:0004252|GO:0006508
Cmo04g01223 674 ProSiteProfiles Serine proteases, subtilase domain profile. 52 526 - -
Cmo04g01223 674 Gene3D - 543 671 - -
Cmo04g01223 674 CDD Peptidases_S8_3 45 500 IPR034197 -
Cmo04g01223 674 ProSitePatterns Serine proteases, subtilase family, serine active site. 465 475 IPR023828 -
Cmo04g01223 674 SUPERFAMILY Subtilisin-like 52 527 IPR036852 GO:0004252|GO:0006508
Cmo04g01223 674 CDD PA_subtilisin_like 273 397 - -
Cmo04g01223 674 Pfam Subtilase family 69 518 IPR000209 GO:0006508|GO:0008236
Cmo04g01223 674 Pfam Fibronectin type-III domain 573 668 IPR041469 -
Cmo04g01223 674 PRINTS Subtilisin serine protease family (S8) signature 136 149 IPR015500 -
Cmo04g01223 674 PRINTS Subtilisin serine protease family (S8) signature 464 480 IPR015500 -
Cmo04g01223 674 PRINTS Subtilisin serine protease family (S8) signature 68 87 IPR015500 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00186 Cmo04g01223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01072 Cmo-Chr4:5379682 Cmo04g01223 Cmo-Chr4:6205237 0 dispersed
Cmo04g01223 Cmo-Chr4:6205237 Cmo15g01139 Cmo-Chr15:7952129 0 dispersed
Cmo07g00893 Cmo-Chr7:4228554 Cmo04g01223 Cmo-Chr4:6205237 0 dispersed
Cmo04g01223 Cmo-Chr4:6205237 Cmo04g01224 Cmo-Chr4:6211939 3.54E-175 tandem
Cmo04g00185 Cmo-Chr4:933658 Cmo04g01223 Cmo-Chr4:6205237 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01223 - - cmos:111458206 1259.97