Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g01271 | ATGGAGGGTGTTATGAGGCTTTTGGTGTCTGCAAAGCCATATTTAGGGGTCGTTTTTGTGCAGTTCGGGTCGGCTGGAATGGCGATCATTGCGAAGTCAGCTCTCAACAAAGGGATGAGCCAATATGTGTTTGTGTTCTATCGAATGGCTGTTGCTACTCTCGTCTTTGCTCCTTTTGCCATTGTCTTTGACAGGAAAGTGAGAACTAAGATGACCCTTCCGTTGTTCTTCAAGATTGTGATGCTCGGTTTATTAGAGCCGGTGATTGATCTGAACTTGTACTTTACTGGTATGAAGTTCACAACAGCAACCTTTGCAGTCGCCATGTGCAATGTTCTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCATAGGAACCATGGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAACAGGACCCATGTTGAATCTGCCATGGACAAAGCCCTACCACCCCTCTGCTTCTTCATCTTCTTCTTCAGCTGGTTCTGCAAATCACCAAAGCGCAATCAAGGGCTCCCTTATGATTGCCATTGGCGACATTTCCTGGTCAGCTTTCATCATTCTTCAGATGATTACATTGAAATCGTACCCGGCCGAGCTGTCTCTTACAGCGTTGATTTGCTTGGTGGGTACCATTGGTGGCTGTGGGGTGGCTTTGGTCATGGAGAGGGGGAACCCTTCTGCTTGGGCAGTGCACTTTGATAGACAGCTTCTGGCAGTGGTTTACGCTGGAGTAATGTGTTCAGGGGTAACTTATTATATTCAAGGAGTGGTGATGAAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTGAGCTTGATTCTTGTTGCAATCTTGAGCTCCTTCATCTTGTCTGAGATCATGTTCCTGGGAAGGATTGTTGGAGCAGTGGTGATAATCACAGGGTTGTACCTGGTTTTGTGGGGCAAAAGCAAGGATCAGCTTTTAGTTAAACCAGAATCTGATAAGATATCATCTGGTAAGCAACAAATGATTGCAACAACGGGTGAGGAGGGCTCGGAGTCCTTTCAATCGAGTCAAGAATTCACGGCGCTTGATGTTGGCAAGGAGGACACAAAATGA | 1149 | 45.78 | MEGVMRLLVSAKPYLGVVFVQFGSAGMAIIAKSALNKGMSQYVFVFYRMAVATLVFAPFAIVFDRKVRTKMTLPLFFKIVMLGLLEPVIDLNLYFTGMKFTTATFAVAMCNVLPAFAFLMAWACRLEKVNILKRGSQAKIIGTMVTVGGAMIMTFITGPMLNLPWTKPYHPSASSSSSSAGSANHQSAIKGSLMIAIGDISWSAFIILQMITLKSYPAELSLTALICLVGTIGGCGVALVMERGNPSAWAVHFDRQLLAVVYAGVMCSGVTYYIQGVVMKIKGPVFVTAFNPLSLILVAILSSFILSEIMFLGRIVGAVVIITGLYLVLWGKSKDQLLVKPESDKISSGKQQMIATTGEEGSESFQSSQEFTALDVGKEDTK | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6450155 | 6453200 | + | CmoCh04G012710.1 | Cmo04g01271 | 380246 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g01271 | 382 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 47 | 154 | - | - | |
Cmo04g01271 | 382 | Pfam | EamA-like transporter family | 14 | 153 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo04g01271 | 382 | Pfam | EamA-like transporter family | 190 | 329 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo04g01271 | 382 | PANTHER | WAT1-RELATED PROTEIN | 9 | 342 | - | - | |
Cmo04g01271 | 382 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 249 | 334 | - | - | |
Cmo04g01271 | 382 | MobiDBLite | consensus disorder prediction | 345 | 382 | - | - | |
Cmo04g01271 | 382 | MobiDBLite | consensus disorder prediction | 345 | 374 | - | - | |
Cmo04g01271 | 382 | PANTHER | WAT1-RELATED PROTEIN | 9 | 342 | IPR030184 | GO:0016021|GO:0022857 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g01271 | Cmo15g00424 | CCT | |
Cmo04g01271 | Cmo04g02748 | CCT | |
Cmo04g01271 | Cmo04g00228 | ECH | |
Cmo04g01271 | Cmo04g02748 | ECH | |
Cmo04g02748 | Cmo04g01271 | ECH | |
Cmo04g01271 | Cmo15g00424 | ECH | |
Cmo04g00228 | Cmo04g01271 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00227 | Cmo-Chr4:1137645 | Cmo04g01271 | Cmo-Chr4:6450155 | 0 | dispersed | |
Cmo04g01271 | Cmo-Chr4:6450155 | Cmo04g01883 | Cmo-Chr4:9586137 | 0 | dispersed | |
Cmo04g01270 | Cmo-Chr4:6434871 | Cmo04g01271 | Cmo-Chr4:6450155 | 5.11E-174 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g01271 | - | - | csv:101206072 | 569.696 |