Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01285 ATGGCCATTGAGGTTGTTGTCAAGGCTGCTACTGGTGCTCCCGATGTTCTTGGAGACTGCCCTTTCTGCCACAGGGTTCTTTTAACTTTAGAGGAGAAGAAAGTTGCTTATAAATTGCTTCTTGTCAATCTCTCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCTGTTGTGAAGTTTGATGGCAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGACAAGTATCCAGACCCTTCTCTTGTTACTCCTCCTCAATTTTCTTCTGTGGGATCAAAGATAAACGGTGCTTTTGTAAAATTCTTGTTGAGCAAGGACCCCAGTGATGGTTCAGAGCAGGCTTTGCTTGAAGAGTTGAAGGCGTTGGATGAGCATCTTAAGGCTCATGGTCCTTATGTTGCTGGAGAAAAGGTAACTGCTGTTGATTTGAGTCTGGCACCAAAGTTGTACCATATTGATATTGCTCTTGGCCATTTCAAGAAGTGGGTTTTCCCCGAAAACTTACGGAGTTTATCCGCATACAAAAAGTTGCTTTTCGCTCGAGAATCGTTCGTGAAGACGAAGGCTGTCCCAGAACATGTCATTGCTGGTTGGGAGACCAAGGTGAATGCTGCTTGA 642 45.33 MAIEVVVKAATGAPDVLGDCPFCHRVLLTLEEKKVAYKLLLVNLSDKPSWFLEVSPEGKVPVVKFDGKWVPDSDVIVGILEDKYPDPSLVTPPQFSSVGSKINGAFVKFLLSKDPSDGSEQALLEELKALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHIDIALGHFKKWVFPENLRSLSAYKKLLFARESFVKTKAVPEHVIAGWETKVNAA 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6518889 6521436 - CmoCh04G012850.1 Cmo04g01285 380260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01285 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Cmo04g01285 213 Pfam Glutathione S-transferase, C-terminal domain 119 175 - -
Cmo04g01285 213 SUPERFAMILY GST C-terminal domain-like 99 209 IPR036282 -
Cmo04g01285 213 Gene3D - 90 212 - -
Cmo04g01285 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Cmo04g01285 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 2 208 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cmo04g01285 213 Gene3D Glutaredoxin 1 89 - -
Cmo04g01285 213 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Cmo04g01285 213 SFLD Glutathione Transferase (cytosolic) 19 174 IPR040079 -
Cmo04g01285 213 PANTHER DEHYDROASCORBATE REDUCTASE 2 208 - -
Cmo04g01285 213 CDD GST_N_family 20 77 - -
Cmo04g01285 213 SFLD Main (cytGST) 19 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00243 Cmo-Chr4:1212288 Cmo04g01285 Cmo-Chr4:6518889 6.14E-126 dispersed
Cmo04g00244 Cmo-Chr4:1215990 Cmo04g01285 Cmo-Chr4:6518889 5.11E-51 dispersed
Cmo04g00245 Cmo-Chr4:1218654 Cmo04g01285 Cmo-Chr4:6518889 4.39E-52 dispersed
Cmo04g01285 Cmo-Chr4:6518889 Cmo06g00338 Cmo-Chr6:1635847 1.99E-09 dispersed
Cmo14g00834 Cmo-Chr14:4326528 Cmo04g01285 Cmo-Chr4:6518889 9.56E-93 transposed
Cmo04g00242 Cmo-Chr4:1210152 Cmo04g01285 Cmo-Chr4:6518889 1.75E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01285 K21888 - cmax:111483829 374.785