Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01289 ATGCACATCAAAGAATTCTTTGGCTTCTCCCATTCCTCTTCCTCAAAATCCCTCCATTCCTTTCAGAGCTCCGACCGCCGGAAACCACCGCCGTCAAGCTATGACTCTTCCGAATCGGCGGCCATGGAAGAAGCCATCGTAAACTCCGAACCCATCATCACGAAATGGGACCCGGATTCCTCTGAGTTCAATAGAATCACCTTCCTCTTCCGCCATGGTCGAGCGGAATCTGACGAGTTTGTCAACTCCGTCAACAGCCTCCGGCGAGCGATGGACTTTTTCATTTCGGAAAATTCCACCTCCCCTGTTCTTGTTCTAGCTCAACAGTTGATGCAGGCCGCCATGAGGCGACTTGAGAAGGAGTTTTACCAGATTTTGAGTGAGAATCGCCAGAATTTGGACCCTGAATCTATCTCCAGTAGGTCCTCCAACCGGTCGATGGCCGACGGGGAAACCAGTGATTTGATTACAGAGTTCGATAGAGTGTCGGCGGATTTGAAATCGATTGCTGATTGTATGATCGATTCTGGGTATGGGAAAGAATGCGTTAAAATCTATAAAGTGATACGAAAATCGATCGTTGATGAAACTCTGTACCGCCTCGGAACAGAGAAATTCAAAATTTCGAGAATTATGAGATGGAATTGGGATTCACTCGAGCATGTGAGCAAGAATTGGATGAACTCAATTAAGATTGTTGTAAATACTCTGTTTCGTGGCGAGAAAATTCTCTGTGATCATGTTTTTTCGCGATCGGAAATGATCAGAGAGTCCTGTTTTTCCGAGATCACAAAAGATGGTGCAATCGCTTTATTCAGATTCCCGGAATTGATCGCAAAAGGGAAGAAAGATTCCGACAAAATCTTTTTGTTAATGGAGCTTTACGAGGCGAATTCCGACGTATTGCCGGAAATTGAGGTCATATTCGACTCTGTTTCTACATCCGCCATTAAAACGCAAGCTCAAACGTCAATGGAGAAACTTGCAGATTCAATCCGTGACATTCTCTCTGAATTCGGGTCGACAATTCAAAAAGATTCGTCGAAAAACCCAGCTCCCGGCGGCGGAATCCACCCACTGACCCGATCGGCAATGAACTACATTTCGTCTCTCGGCGACTACGCTGGAACCCTCTCCGACATACTCACCGCCGAAAACTCTACAATTCCATCGTCGTACATGGAAACCATCGGTGCAGACGACGCGCTATCATCGCCAGTGGCAGCTCAATTGGGGTGGCTGATTTTAGTCCTCCTCTGCAAACTTGACACAAAAGCAGAGCTGTACAAAGACGTATCGTTGTCGTACCTATTTCTGGCGAACAACCTGAATTTCATCGTGAAGACGGCGGCGACGACGAATTTGAATACATTGGTAGGCACCGAGTGGGTGACGAACCACAGGAGCAAGGTGAAGGTGTACGCAGCGAAGTACGAAGCGACGGCTTGGAACAGAGTGGTGAATTCGCTGCCGGAAAGTTGGTCGGAAGAGACGGCGGCGGAGGGGTTGAAGAGGTTCAATGCGGCGTTTGAAGAGGCGTATCGGAAGCAGATATCGTGGAGAGTGGAGGATGGAAATTTGAGAGATGAATTGAAGACGGCGATAGCGAAGAAGGTGGTGCCGATTTACAGAGAGTTCTACGAGGGGTATTGTGTTGAGAAGGTGAATGTGGGTGTGGAAAGGAATGATCTTGGGAAAGCTTTTGGTGTGAGATTTTCTCCCGATGATTTGGGGAATTATTTGTCGGATTTGTTCCATGGGGTTTCTCCTTCTTCGCAAAAGGGCTAA 1788 47.48 MHIKEFFGFSHSSSSKSLHSFQSSDRRKPPPSSYDSSESAAMEEAIVNSEPIITKWDPDSSEFNRITFLFRHGRAESDEFVNSVNSLRRAMDFFISENSTSPVLVLAQQLMQAAMRRLEKEFYQILSENRQNLDPESISSRSSNRSMADGETSDLITEFDRVSADLKSIADCMIDSGYGKECVKIYKVIRKSIVDETLYRLGTEKFKISRIMRWNWDSLEHVSKNWMNSIKIVVNTLFRGEKILCDHVFSRSEMIRESCFSEITKDGAIALFRFPELIAKGKKDSDKIFLLMELYEANSDVLPEIEVIFDSVSTSAIKTQAQTSMEKLADSIRDILSEFGSTIQKDSSKNPAPGGGIHPLTRSAMNYISSLGDYAGTLSDILTAENSTIPSSYMETIGADDALSSPVAAQLGWLILVLLCKLDTKAELYKDVSLSYLFLANNLNFIVKTAATTNLNTLVGTEWVTNHRSKVKVYAAKYEATAWNRVVNSLPESWSEETAAEGLKRFNAAFEEAYRKQISWRVEDGNLRDELKTAIAKKVVPIYREFYEGYCVEKVNVGVERNDLGKAFGVRFSPDDLGNYLSDLFHGVSPSSQKG 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6535475 6537262 - CmoCh04G012890.1 Cmo04g01289 380264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01289 595 Gene3D Exocyst complex component Exo70 52 594 - -
Cmo04g01289 595 MobiDBLite consensus disorder prediction 1 41 - -
Cmo04g01289 595 Pfam Exo70 exocyst complex subunit 224 583 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo04g01289 595 SUPERFAMILY Cullin repeat-like 50 586 IPR016159 -
Cmo04g01289 595 PANTHER EXOCYST COMPLEX PROTEIN EXO70 13 590 IPR004140 GO:0000145|GO:0006887
Cmo04g01289 595 MobiDBLite consensus disorder prediction 8 41 - -
Cmo04g01289 595 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 13 590 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01289 Cmo-Chr4:6535475 Cmo13g00162 Cmo-Chr13:1042791 3.87E-172 dispersed
Cmo01g00589 Cmo-Chr1:2986280 Cmo04g01289 Cmo-Chr4:6535475 1.07E-175 wgd
Cmo14g00163 Cmo-Chr14:726507 Cmo04g01289 Cmo-Chr4:6535475 4.34E-177 wgd
Cmo02g00840 Cmo-Chr2:5099790 Cmo04g01289 Cmo-Chr4:6535475 4.15E-173 wgd
Cmo20g00472 Cmo-Chr20:2180937 Cmo04g01289 Cmo-Chr4:6535475 3.23E-142 wgd
Cmo04g00251 Cmo-Chr4:1243469 Cmo04g01289 Cmo-Chr4:6535475 0 wgd
Cmo04g01289 Cmo-Chr4:6535475 Cmo07g01009 Cmo-Chr7:4983705 1.35E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01289 K07195 - csv:101221801 954.51