Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g01302 | ATGGTATCAGAAACTTTGATGAAGATTGTATCACCTTGCTGGAAACCTTCTGTTGAAGGTGAAAATTCCAGCAGAGGTGGGGATGCGAGTGGTCGGGTTGATGGATTGTTATGGTACAAGGATTCTGGCCGCCATATTAATGGGGAATTCTCAATGGCGGTTATTCAGGCAAATAATTTGTTGGAAGATCGGAGCCAACTCGAGTCAGGGCCACTGAGCTCATTTGAATCAGGTCCCATTGGGACGTTCGTTGGAATCTATGATGGCCATGGAGGACCTGAAGCTGCAGAATTCATAAGTGATCGTCTGTTCAATAATATGAAGAAATTTATTCCAGAAAATCGGGGAGTATCTGCTGAAATTATAAACAAAGCATTCTTGGAGACAGAGGAGGAATTTTTGTCTCTTGTAAAGAAACAATGGCTTAGTAAGCCTCAAATTGCTTCGGTTGGTTCATGCTGTTTGGTAGGCATAATATGTTGTGGATTACTGTATATTGCAAATGCTGGAGATTCTAGAGTGGTGTTGGGAAGATTTGAAAAAACTCATAAAGAGGTTAAAGCCATCCAATTGTCATCTGAGCACAATGCTAGTATTGAATCTGTGCGAGAGGAGTTGCACTCGTTGCATCCCGGTGATCCGCAGATCGTTGTGCTAAAGCACAAGGTGTGGCGCGTGAAGGGTGTTATACAGGTCTCAAGATCCCTTGGTGATGCTTATCTGAAGAAAACAGAGTTCAACCGAGAGCCTCTCTTGCCCAAGTTCAGATTACCAGAACCATTCCACAAGCCAATTCTTAAAGCCGAACCTGCTATTGTAGTGCAGAAACTGTATCCGGAGGATCAGTTCCTTATCTTTGCTTCAGATGGTCTTTGGGAGTATATAAGCAATCAGGAAGCTGTCGACATCGTCCATAGTTGTCCACGTAATGGGGTTGCAAGGAAACTGGTTAAAGCGGCTCTTCATGGAGCTGCAAAGAAAAGAGAAATGAGATACACAGACTTGAAGAAGATCGACCGCGGGGTAAGAAGGCATTTTCACGACGACATAACTGTTGTAGTATTGTTCCTGGATTCGCATTTGATTAGTCGAAGTCCGAGCTACGGACCGATGCTTTCAATCAGAGGAGGTTCTGGTATCCTGGCTAGATCGTAG | 1155 | 43.98 | MVSETLMKIVSPCWKPSVEGENSSRGGDASGRVDGLLWYKDSGRHINGEFSMAVIQANNLLEDRSQLESGPLSSFESGPIGTFVGIYDGHGGPEAAEFISDRLFNNMKKFIPENRGVSAEIINKAFLETEEEFLSLVKKQWLSKPQIASVGSCCLVGIICCGLLYIANAGDSRVVLGRFEKTHKEVKAIQLSSEHNASIESVREELHSLHPGDPQIVVLKHKVWRVKGVIQVSRSLGDAYLKKTEFNREPLLPKFRLPEPFHKPILKAEPAIVVQKLYPEDQFLIFASDGLWEYISNQEAVDIVHSCPRNGVARKLVKAALHGAAKKREMRYTDLKKIDRGVRRHFHDDITVVVLFLDSHLISRSPSYGPMLSIRGGSGILARS | 384 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6609446 | 6613719 | + | CmoCh04G013020.1 | Cmo04g01302 | 380277 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g01302 | 384 | SMART | PP2C_4 | 41 | 355 | IPR001932 | - | |
Cmo04g01302 | 384 | ProSitePatterns | PPM-type phosphatase domain signature. | 83 | 91 | IPR000222 | GO:0043169 | |
Cmo04g01302 | 384 | SUPERFAMILY | PP2C-like | 58 | 358 | IPR036457 | - | |
Cmo04g01302 | 384 | Gene3D | - | 39 | 365 | IPR036457 | - | |
Cmo04g01302 | 384 | PANTHER | ALPHABET, ISOFORM E-RELATED | 8 | 379 | - | - | |
Cmo04g01302 | 384 | Pfam | Protein phosphatase 2C | 82 | 324 | IPR001932 | - | |
Cmo04g01302 | 384 | CDD | PP2Cc | 50 | 357 | IPR001932 | - | |
Cmo04g01302 | 384 | ProSiteProfiles | PPM-type phosphatase domain profile. | 49 | 357 | IPR001932 | - | |
Cmo04g01302 | 384 | PANTHER | PROTEIN PHOSPHATASE 2C 38-RELATED | 8 | 379 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g01302 | Cmo04g00262 | ECH | |
Cmo04g00262 | Cmo04g01302 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01302 | Cmo-Chr4:6609446 | Cmo20g00737 | Cmo-Chr20:3678588 | 0 | dispersed | |
Cmo14g00170 | Cmo-Chr14:759883 | Cmo04g01302 | Cmo-Chr4:6609446 | 0 | wgd | |
Cmo04g00262 | Cmo-Chr4:1306617 | Cmo04g01302 | Cmo-Chr4:6609446 | 0 | wgd | |
Cmo04g01302 | Cmo-Chr4:6609446 | Cmo06g00334 | Cmo-Chr6:1625882 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g01302 | K01102 | - | csv:101220760 | 735.717 |