Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01303 ATGGCGACTTGGACACTGGGCAGCTCCATCGGCGTCTCACAGCCATCGTCTTGTTCGGATGCTTCAGTTCATTGCATTCCGTTTTCATTACGGAGATTAAGCTTCTCCAGCATCATTATTTCTCCTCTTAAGCTTCAAAGACAAGTATCTCGAAGAAGAGCCAGACCTGTAATTTCTGTGAAAATGGCTGCTGCTGAAGATTTTCAGGAAGTTCTTCCCCCAGCCCTCACTTCGGCTTCAGAACCACCTCCTATCTTTGATGGAACAACGAGGCTTTACATATCTTATTCTTGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGACTAAGATAGAATTGGTTCCAATAAATCTACAAGATAGGCCATCTTGGTACAAGGAAAAAGTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAGGTCAAAGGAGAGAGTCTTGACTTAATTAGATATATTGACAGCAATTTTGAGGGGCCTTCATTATTTCCTGAGGATCAGGGAAGGAGAGAGTTTGCTGAAGAGTTGATGAACTACCTGAACTCTTTCAGGGGATCTGTGGTGTCTTCATTTAAAGGAGATCGAAACGAAGCTGACGTGGCGTTCGACTACATCGAATCAGCTCTTTCAAAATATGGAGATGGCCCATTTTTTCTAGGCCAGTTTAGTTTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTATCAGCCGTTCTTATTGGAAGTAAAAACATATGATATCACGGCTGGCAGGCCAAAGCTGGCAGCTTGGATTGAGGAGATGAACAAGGTCGAGGGTTACCAACAAACAAAGGGCGATCCACGGGAGCATGTTGATAACTTTAAGAAGCGGTTTTTGAGCCCTTCGTGA 897 44.04 MATWTLGSSIGVSQPSSCSDASVHCIPFSLRRLSFSSIIISPLKLQRQVSRRRARPVISVKMAAAEDFQEVLPPALTSASEPPPIFDGTTRLYISYSCPYAQRVWITRNCKGLQTKIELVPINLQDRPSWYKEKVYPPNKVPALEHNNEVKGESLDLIRYIDSNFEGPSLFPEDQGRREFAEELMNYLNSFRGSVVSSFKGDRNEADVAFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERYQPFLLEVKTYDITAGRPKLAAWIEEMNKVEGYQQTKGDPREHVDNFKKRFLSPS 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6614561 6617864 + CmoCh04G013030.1 Cmo04g01303 380278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01303 298 Pfam Glutathione S-transferase, N-terminal domain 92 168 IPR004045 -
Cmo04g01303 298 Gene3D - 167 297 - -
Cmo04g01303 298 Pfam Glutathione S-transferase, C-terminal domain 204 268 - -
Cmo04g01303 298 PANTHER GLUTATHIONE S-TRANSFERASE L1 49 295 IPR044629 GO:0004364
Cmo04g01303 298 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 88 169 IPR004045 -
Cmo04g01303 298 Gene3D Glutaredoxin 63 166 - -
Cmo04g01303 298 CDD GST_C_Lambda 174 291 - -
Cmo04g01303 298 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 49 295 - -
Cmo04g01303 298 SUPERFAMILY Thioredoxin-like 79 170 IPR036249 -
Cmo04g01303 298 SFLD Glutathione Transferase (cytosolic) 91 271 IPR040079 -
Cmo04g01303 298 SFLD Main (cytGST) 91 271 - -
Cmo04g01303 298 SUPERFAMILY GST C-terminal domain-like 165 294 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01303 Cmo-Chr4:6614561 Cmo06g00338 Cmo-Chr6:1635847 1.27E-111 dispersed
Cmo14g00834 Cmo-Chr14:4326528 Cmo04g01303 Cmo-Chr4:6614561 2.16E-06 dispersed
Cmo04g01303 Cmo-Chr4:6614561 Cmo06g00337 Cmo-Chr6:1631372 3.08E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01303 K00799 - csv:101220995 486.493