Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g01303 | ATGGCGACTTGGACACTGGGCAGCTCCATCGGCGTCTCACAGCCATCGTCTTGTTCGGATGCTTCAGTTCATTGCATTCCGTTTTCATTACGGAGATTAAGCTTCTCCAGCATCATTATTTCTCCTCTTAAGCTTCAAAGACAAGTATCTCGAAGAAGAGCCAGACCTGTAATTTCTGTGAAAATGGCTGCTGCTGAAGATTTTCAGGAAGTTCTTCCCCCAGCCCTCACTTCGGCTTCAGAACCACCTCCTATCTTTGATGGAACAACGAGGCTTTACATATCTTATTCTTGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGACTAAGATAGAATTGGTTCCAATAAATCTACAAGATAGGCCATCTTGGTACAAGGAAAAAGTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAGGTCAAAGGAGAGAGTCTTGACTTAATTAGATATATTGACAGCAATTTTGAGGGGCCTTCATTATTTCCTGAGGATCAGGGAAGGAGAGAGTTTGCTGAAGAGTTGATGAACTACCTGAACTCTTTCAGGGGATCTGTGGTGTCTTCATTTAAAGGAGATCGAAACGAAGCTGACGTGGCGTTCGACTACATCGAATCAGCTCTTTCAAAATATGGAGATGGCCCATTTTTTCTAGGCCAGTTTAGTTTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTATCAGCCGTTCTTATTGGAAGTAAAAACATATGATATCACGGCTGGCAGGCCAAAGCTGGCAGCTTGGATTGAGGAGATGAACAAGGTCGAGGGTTACCAACAAACAAAGGGCGATCCACGGGAGCATGTTGATAACTTTAAGAAGCGGTTTTTGAGCCCTTCGTGA | 897 | 44.04 | MATWTLGSSIGVSQPSSCSDASVHCIPFSLRRLSFSSIIISPLKLQRQVSRRRARPVISVKMAAAEDFQEVLPPALTSASEPPPIFDGTTRLYISYSCPYAQRVWITRNCKGLQTKIELVPINLQDRPSWYKEKVYPPNKVPALEHNNEVKGESLDLIRYIDSNFEGPSLFPEDQGRREFAEELMNYLNSFRGSVVSSFKGDRNEADVAFDYIESALSKYGDGPFFLGQFSLVDIAYAPFIERYQPFLLEVKTYDITAGRPKLAAWIEEMNKVEGYQQTKGDPREHVDNFKKRFLSPS | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6614561 | 6617864 | + | CmoCh04G013030.1 | Cmo04g01303 | 380278 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g01303 | 298 | Pfam | Glutathione S-transferase, N-terminal domain | 92 | 168 | IPR004045 | - | |
Cmo04g01303 | 298 | Gene3D | - | 167 | 297 | - | - | |
Cmo04g01303 | 298 | Pfam | Glutathione S-transferase, C-terminal domain | 204 | 268 | - | - | |
Cmo04g01303 | 298 | PANTHER | GLUTATHIONE S-TRANSFERASE L1 | 49 | 295 | IPR044629 | GO:0004364 | |
Cmo04g01303 | 298 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 88 | 169 | IPR004045 | - | |
Cmo04g01303 | 298 | Gene3D | Glutaredoxin | 63 | 166 | - | - | |
Cmo04g01303 | 298 | CDD | GST_C_Lambda | 174 | 291 | - | - | |
Cmo04g01303 | 298 | PANTHER | GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC | 49 | 295 | - | - | |
Cmo04g01303 | 298 | SUPERFAMILY | Thioredoxin-like | 79 | 170 | IPR036249 | - | |
Cmo04g01303 | 298 | SFLD | Glutathione Transferase (cytosolic) | 91 | 271 | IPR040079 | - | |
Cmo04g01303 | 298 | SFLD | Main (cytGST) | 91 | 271 | - | - | |
Cmo04g01303 | 298 | SUPERFAMILY | GST C-terminal domain-like | 165 | 294 | IPR036282 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01303 | Cmo-Chr4:6614561 | Cmo06g00338 | Cmo-Chr6:1635847 | 1.27E-111 | dispersed | |
Cmo14g00834 | Cmo-Chr14:4326528 | Cmo04g01303 | Cmo-Chr4:6614561 | 2.16E-06 | dispersed | |
Cmo04g01303 | Cmo-Chr4:6614561 | Cmo06g00337 | Cmo-Chr6:1631372 | 3.08E-110 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g01303 | K00799 | - | csv:101220995 | 486.493 |