Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo04g01389 | ATGGATCGATTTCCCAATGATCTCGACGAAGAAATATGCATCGCGGAGAAATTTGAGAGAGAGGAAGACGACGACGACGAGGAGGAGCAAGAAGATGGACAAGACGACTGGGACGATTGGAATGCAGACGAGGAAGGAAGCGAAGAAGCATTTGATTCGAATTTTCTGTGTCTGTTCTGCAACTCGAAGTATAATGACTGCGATGCGCTGTTCAACCACTGCAACTCGGTTCACTACTTCGATTTTCACGGCATCAGGAGGACTCTGGGTTTAGACTTTTATGGTTCGTTCAAAGTTATCAACTACATACGATCTCAGGTAGCAGAAAACAGATGTTGGAGCTGTGGTTTCTTGTGTCAATCAAACCAGGATTTACAGAACCATTTACACAAAACACTAAATCTCAGTGACGTAAAGGCTCTTTGGAATGATGATAAATATCTAAATCCCTTCAGGCAAGACGATCCGCTCCTGTACAGTTTTGCAGAAGACGAAGAGGATGATGAAATTTCACTCATCAACAATGATCTTCAGAGGAATGCGGGTACTGATGGTGGTAATTGCAATCATGATGAAATGAGTAGAGAAAATCTTCCATTTCATCCAAACCAAAACAAGGAAAATGGAATGGAAGATTGTTGTTCATCTTTACATGGTTATTTGAATGCTCCAAGCAACTTAGAGGCTGAGATTGAGAATACTGTGAAAACCACGGAAATCTTGGGACTGAAAGACGATCAATTAAAAATAGCCAGACGAAATGTTGATAGAATGGATATCAAGAATGCAAATGTCAGAACGGAAGCCTATATGCATGCTATTTTGCAAAATCCGTCTCTCTTCCACAATGCAGCTGTGATGGATGTAGGCTGTGGAACAGGCATACTCAGTCTCTTTGCTGCAAAAGCGGGTGCATCGAGAGTTCTTGCGGTTGAAGCGAGTGAAAAGATGGCTGCAGTGGCCACCCAAATTGCTAAAGACAATGGGCTCTGGCGGAACGGGAAACAGACTGGAGATTGTGGCGTGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAGCCTCACAGTGTTGACGTATTAGTGAGTGAATGGATGGGGTATTGCTTGCTGTATGAGTCAATGCTGAACTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACTGCCACAATTCTTGTTGCAGGATTTGGAGCTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGGAAGGAACTTATAAAGGATGCTGCCAAAGCTCCCATTGTTGACATTGTGGATGCTAATGATTTGGTAACTAGTACTGCAATTCTCCATACTTTCGATCTTGCAACTATGCATCCTGATGAAGTAGACTTCACTGCAAGCACGGACTTGGAACCAAATTTACATTATCCTTCAAGCAACTCAGATGATGTTGAAGTAGAAGCATCTTGGTGTCATGGAGTTGTCCTATGGTTTGAAACTGGTTTCACAAGCAGATTTTGCAAGGAATCACCGGCTGTTCTGTCTACATCTCCCCACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCACAGAGCCAATTGCTTTAACATCTAGAAAATCTGCCACCAACAAATCAGCACCAGTAGGTAGCCATGCCTCCCCTGCTGTCAAAGTTCATTTACGCCTTAGCATTGTCCGTGCGCCCGAACATCGAAGCATTGATATTTCACTAGAGACTACTGGGATTGCTGCTGATGGTCGGAACCGCGACTGGCCTGTACAACTTTTCACATTAAGATAG | 1857 | 43.35 | MDRFPNDLDEEICIAEKFEREEDDDDEEEQEDGQDDWDDWNADEEGSEEAFDSNFLCLFCNSKYNDCDALFNHCNSVHYFDFHGIRRTLGLDFYGSFKVINYIRSQVAENRCWSCGFLCQSNQDLQNHLHKTLNLSDVKALWNDDKYLNPFRQDDPLLYSFAEDEEDDEISLINNDLQRNAGTDGGNCNHDEMSRENLPFHPNQNKENGMEDCCSSLHGYLNAPSNLEAEIENTVKTTEILGLKDDQLKIARRNVDRMDIKNANVRTEAYMHAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVLAVEASEKMAAVATQIAKDNGLWRNGKQTGDCGVSSGTIEVVHGMVEELDKNIEIQPHSVDVLVSEWMGYCLLYESMLNSVLFARDRWLKPGGAILPDTATILVAGFGAGGTSLPFWENVYGFSMSCVGKELIKDAAKAPIVDIVDANDLVTSTAILHTFDLATMHPDEVDFTASTDLEPNLHYPSSNSDDVEVEASWCHGVVLWFETGFTSRFCKESPAVLSTSPHTPKTHWSQTILTFTEPIALTSRKSATNKSAPVGSHASPAVKVHLRLSIVRAPEHRSIDISLETTGIAADGRNRDWPVQLFTLR | 618 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 7071918 | 7075863 | - | CmoCh04G013890.1 | Cmo04g01389 | 380364 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo04g01389 | 618 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE | 25 | 616 | IPR025799 | GO:0016274|GO:0018216 | |
Cmo04g01389 | 618 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 259 | 557 | IPR029063 | - | |
Cmo04g01389 | 618 | Pfam | C2H2 type zinc-finger (2 copies) | 57 | 131 | IPR041661 | - | |
Cmo04g01389 | 618 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 57 | 78 | IPR013087 | - | |
Cmo04g01389 | 618 | Gene3D | - | 408 | 609 | - | - | |
Cmo04g01389 | 618 | SUPERFAMILY | beta-beta-alpha zinc fingers | 32 | 169 | IPR036236 | - | |
Cmo04g01389 | 618 | Gene3D | Vaccinia Virus protein VP39 | 227 | 405 | IPR029063 | - | |
Cmo04g01389 | 618 | CDD | AdoMet_MTases | 286 | 404 | - | - | |
Cmo04g01389 | 618 | PANTHER | PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED | 25 | 616 | - | - | |
Cmo04g01389 | 618 | Pfam | Methyltransferase domain | 286 | 401 | IPR041698 | - | |
Cmo04g01389 | 618 | MobiDBLite | consensus disorder prediction | 18 | 42 | - | - | |
Cmo04g01389 | 618 | ProSiteProfiles | SAM-dependent methyltransferase PRMT-type domain profile. | 233 | 572 | IPR025799 | GO:0016274|GO:0018216 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01389 | Cmo-Chr4:7071918 | Cmo11g00689 | Cmo-Chr11:3314381 | 3.58E-57 | dispersed | |
Cmo18g00853 | Cmo-Chr18:9855731 | Cmo04g01389 | Cmo-Chr4:7071918 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo04g01389 | K11436 | - | csv:101215999 | 974.156 |