Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01389 ATGGATCGATTTCCCAATGATCTCGACGAAGAAATATGCATCGCGGAGAAATTTGAGAGAGAGGAAGACGACGACGACGAGGAGGAGCAAGAAGATGGACAAGACGACTGGGACGATTGGAATGCAGACGAGGAAGGAAGCGAAGAAGCATTTGATTCGAATTTTCTGTGTCTGTTCTGCAACTCGAAGTATAATGACTGCGATGCGCTGTTCAACCACTGCAACTCGGTTCACTACTTCGATTTTCACGGCATCAGGAGGACTCTGGGTTTAGACTTTTATGGTTCGTTCAAAGTTATCAACTACATACGATCTCAGGTAGCAGAAAACAGATGTTGGAGCTGTGGTTTCTTGTGTCAATCAAACCAGGATTTACAGAACCATTTACACAAAACACTAAATCTCAGTGACGTAAAGGCTCTTTGGAATGATGATAAATATCTAAATCCCTTCAGGCAAGACGATCCGCTCCTGTACAGTTTTGCAGAAGACGAAGAGGATGATGAAATTTCACTCATCAACAATGATCTTCAGAGGAATGCGGGTACTGATGGTGGTAATTGCAATCATGATGAAATGAGTAGAGAAAATCTTCCATTTCATCCAAACCAAAACAAGGAAAATGGAATGGAAGATTGTTGTTCATCTTTACATGGTTATTTGAATGCTCCAAGCAACTTAGAGGCTGAGATTGAGAATACTGTGAAAACCACGGAAATCTTGGGACTGAAAGACGATCAATTAAAAATAGCCAGACGAAATGTTGATAGAATGGATATCAAGAATGCAAATGTCAGAACGGAAGCCTATATGCATGCTATTTTGCAAAATCCGTCTCTCTTCCACAATGCAGCTGTGATGGATGTAGGCTGTGGAACAGGCATACTCAGTCTCTTTGCTGCAAAAGCGGGTGCATCGAGAGTTCTTGCGGTTGAAGCGAGTGAAAAGATGGCTGCAGTGGCCACCCAAATTGCTAAAGACAATGGGCTCTGGCGGAACGGGAAACAGACTGGAGATTGTGGCGTGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAGCCTCACAGTGTTGACGTATTAGTGAGTGAATGGATGGGGTATTGCTTGCTGTATGAGTCAATGCTGAACTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAGCCTGGAGGTGCAATCTTACCAGATACTGCCACAATTCTTGTTGCAGGATTTGGAGCTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGGAAGGAACTTATAAAGGATGCTGCCAAAGCTCCCATTGTTGACATTGTGGATGCTAATGATTTGGTAACTAGTACTGCAATTCTCCATACTTTCGATCTTGCAACTATGCATCCTGATGAAGTAGACTTCACTGCAAGCACGGACTTGGAACCAAATTTACATTATCCTTCAAGCAACTCAGATGATGTTGAAGTAGAAGCATCTTGGTGTCATGGAGTTGTCCTATGGTTTGAAACTGGTTTCACAAGCAGATTTTGCAAGGAATCACCGGCTGTTCTGTCTACATCTCCCCACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCACAGAGCCAATTGCTTTAACATCTAGAAAATCTGCCACCAACAAATCAGCACCAGTAGGTAGCCATGCCTCCCCTGCTGTCAAAGTTCATTTACGCCTTAGCATTGTCCGTGCGCCCGAACATCGAAGCATTGATATTTCACTAGAGACTACTGGGATTGCTGCTGATGGTCGGAACCGCGACTGGCCTGTACAACTTTTCACATTAAGATAG 1857 43.35 MDRFPNDLDEEICIAEKFEREEDDDDEEEQEDGQDDWDDWNADEEGSEEAFDSNFLCLFCNSKYNDCDALFNHCNSVHYFDFHGIRRTLGLDFYGSFKVINYIRSQVAENRCWSCGFLCQSNQDLQNHLHKTLNLSDVKALWNDDKYLNPFRQDDPLLYSFAEDEEDDEISLINNDLQRNAGTDGGNCNHDEMSRENLPFHPNQNKENGMEDCCSSLHGYLNAPSNLEAEIENTVKTTEILGLKDDQLKIARRNVDRMDIKNANVRTEAYMHAILQNPSLFHNAAVMDVGCGTGILSLFAAKAGASRVLAVEASEKMAAVATQIAKDNGLWRNGKQTGDCGVSSGTIEVVHGMVEELDKNIEIQPHSVDVLVSEWMGYCLLYESMLNSVLFARDRWLKPGGAILPDTATILVAGFGAGGTSLPFWENVYGFSMSCVGKELIKDAAKAPIVDIVDANDLVTSTAILHTFDLATMHPDEVDFTASTDLEPNLHYPSSNSDDVEVEASWCHGVVLWFETGFTSRFCKESPAVLSTSPHTPKTHWSQTILTFTEPIALTSRKSATNKSAPVGSHASPAVKVHLRLSIVRAPEHRSIDISLETTGIAADGRNRDWPVQLFTLR 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7071918 7075863 - CmoCh04G013890.1 Cmo04g01389 380364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01389 618 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 25 616 IPR025799 GO:0016274|GO:0018216
Cmo04g01389 618 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 259 557 IPR029063 -
Cmo04g01389 618 Pfam C2H2 type zinc-finger (2 copies) 57 131 IPR041661 -
Cmo04g01389 618 ProSitePatterns Zinc finger C2H2 type domain signature. 57 78 IPR013087 -
Cmo04g01389 618 Gene3D - 408 609 - -
Cmo04g01389 618 SUPERFAMILY beta-beta-alpha zinc fingers 32 169 IPR036236 -
Cmo04g01389 618 Gene3D Vaccinia Virus protein VP39 227 405 IPR029063 -
Cmo04g01389 618 CDD AdoMet_MTases 286 404 - -
Cmo04g01389 618 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 25 616 - -
Cmo04g01389 618 Pfam Methyltransferase domain 286 401 IPR041698 -
Cmo04g01389 618 MobiDBLite consensus disorder prediction 18 42 - -
Cmo04g01389 618 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 233 572 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01389 Cmo-Chr4:7071918 Cmo11g00689 Cmo-Chr11:3314381 3.58E-57 dispersed
Cmo18g00853 Cmo-Chr18:9855731 Cmo04g01389 Cmo-Chr4:7071918 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01389 K11436 - csv:101215999 974.156