Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01463 ATGGTGGCCGGCGGTGGAATCTCCGGGTGCTCCGACATCAGTAGCATCGCCGTCCACGTCATCACAGGGCGGTGGTTCGTGGTGTTTGCTTCCCTACTAATCATGGCGGCAGCTGGAGCAACCTACATGTTCAGCCTGTATTCTAGTGACATAAAGTCAGTTTTAGGTTACGACCAAACTACGTTAAATTTGTTGAGCTTTTTCAAGGATTTGGGTGCAAACGTGGGCGTTTTGTCTGGACTTATCAACGAGGTTACACCGCCGTGGGTGGTTCTATCCATCGGTGCCGTTATGAATTTCTTTGGTTACTTCATGATTTGGCTCGCCGTTACTCGGAAGATCGCCGCCCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCTAATTCTCAATCCTTTGCCAATACGGGTTCCCTTGTTACTTGTGTCAAGAACTTCCCTGAGAGTCGGGGCGTCGTTCTCGGTATCTTGAAGGGCTACGTTGGGCTGAGCGGCGCCATAATCACACAACTCTTCCACGCATTTTACGGCGGCGACACCAAATCCTTGATTCTCCTCATCGGATGGCTGCCGGCGGCGATATCCTTTGCATTTTTACGGACAATTCGGATAATGAAAGTGATCCGACAGCCAAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCTCTAGCCCTCGCCGGATTTCTAATGCTAATGATCATCGTAGAAAGCAAAACAGAGTTCAGTCAGAGCGGATATGGCGGCAGCGCCGCCGTTGTCCTCCTCCTCCTCTTCCTCCCACTCGCCGTCGTCATCATTGAAGAATACAATCTCTGGAACCTCAAAACCGCCGCCGCCACCGCCGCCATTAGATCTCCAAATCACCCTGTTCAAATCGTAACAGAGAAACTCCCAAAAACAGAGCATCAAAAACACATCCCAAAAACAGAGCATCAAAAAGAACCATCATGCTGGACAACAATCTTCAACCCACCAGAACGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGCGTTGACATGCTGATTCTATTCTTAGCAGCAATTTGCGGCGTCGGCGGAACATTAACAGCCATCGACAACTTGGGGCAAATCGGAATGTCTTTAGGATACCCAAAACAGAGCATTAGCACATTTGTAACACTCGTTAGCATATGGAATTACCTCGGCCGAGTAACCTCTGGTTTCGTCTCTGAAATCGTCTTAACGAAATACAAATTCCCTCGCCCTTTAATGCTCTCAATGACCCTTCTTGTGTCCTGCGTCGGCCATTTGATGATAGCATTCGATGTTCCAAATGGGCTTTACGTGGCTTCCATTGTAATCGGATTCTGCTTCGGAGCACAATGGCCATTGATTTTCGCCATAATTTCAGAGCTATTTGGGCTGAAATATTACTCCACGCTTTACAATTTCGGGTCGGTGGCGAGCCCAATTGGGCTTTATGTTCTGAACGTGAAAGTGGCCGGAAATTTCTACGACAGAGAGGCGGAGAAGCAGCTGAGAGCAAAAGGGATTGTTAGAAAAACAGGGGAAGAGCTGAAATGCTTCGGAGGGGAGTGTTTTAAGCTCTCGTTTCTGGTAATCACCGGAGTTACTTTGTTGGGTATGTTTGTTTCATTGATATTAGTGATTAGAACGAGGAGTTTCTACAAGAGTGATATTTATAAGAAGTTTCGAGACGAAGCTGAAACAGAGATGGCCGGAAATGGCGCTGTAGTGGCCGCCGGACCGCCGGAAGAGACGAGAAAATGA 1770 47.57 MVAGGGISGCSDISSIAVHVITGRWFVVFASLLIMAAAGATYMFSLYSSDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVMNFFGYFMIWLAVTRKIAAPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGGDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLALAGFLMLMIIVESKTEFSQSGYGGSAAVVLLLLFLPLAVVIIEEYNLWNLKTAAATAAIRSPNHPVQIVTEKLPKTEHQKHIPKTEHQKEPSCWTTIFNPPERGEDFTILQALFSVDMLILFLAAICGVGGTLTAIDNLGQIGMSLGYPKQSISTFVTLVSIWNYLGRVTSGFVSEIVLTKYKFPRPLMLSMTLLVSCVGHLMIAFDVPNGLYVASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGSVASPIGLYVLNVKVAGNFYDREAEKQLRAKGIVRKTGEELKCFGGECFKLSFLVITGVTLLGMFVSLILVIRTRSFYKSDIYKKFRDEAETEMAGNGAVVAAGPPEETRK 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7484058 7486245 + CmoCh04G014630.1 Cmo04g01463 380438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01463 589 SUPERFAMILY MFS general substrate transporter 24 554 IPR036259 -
Cmo04g01463 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 573 - -
Cmo04g01463 589 CDD MFS_Mch1p_like 23 542 - -
Cmo04g01463 589 Gene3D MFS general substrate transporter like domains 341 557 IPR036259 -
Cmo04g01463 589 Pfam Nodulin-like 24 269 IPR010658 -
Cmo04g01463 589 PANTHER MFS TRANSPORTER 9 573 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01463 Cmo15g00510 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01199 Cmo-Chr3:9357600 Cmo04g01463 Cmo-Chr4:7484058 0 dispersed
Cmo04g01463 Cmo-Chr4:7484058 Cmo15g00510 Cmo-Chr15:2350179 0 dispersed
Cmo04g01463 Cmo-Chr4:7484058 Cmo04g01464 Cmo-Chr4:7489179 0 tandem
Cmo18g00914 Cmo-Chr18:10319980 Cmo04g01463 Cmo-Chr4:7484058 0 wgd
Cmo04g01463 Cmo-Chr4:7484058 Cmo06g00393 Cmo-Chr6:1920809 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01463 - - csv:101204293 1022.31