Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01464 ATGGACCCAATCTCTGCAGGGTTCAACACCAAATCCTTCACCCTCAAACTAATCAAAGGGCCATGGTTCATGATGTTCGCATCCTTCCTGATTATGTCCATGGCCGGCATCCCTTACATGTTCGGCCTCTACTCCGGCACCATCAAATCTGTATTGGGTTACGACCAAACCACCCTTAATTTCATCAGCTTCTTCAAAGATGTCGGCACCACCGTCGGTGTCTTGGCCGGCTTAATCAACGAAGTAACCCCACCATGGTCCATTCTTGCCATGGGAGCTCTTCTCAATTTCTTCGGTTACTTCATGATTTGGCTCTCTGTTTCCGAGAAGATCCCCACCCATGTTTGGCTCATGTGCTTATATATCTGCGTCGGAGCCAACGCCACCACGTTCGCTAACACCGGCGCCCTCGTCACCTGCGTTAAGAATTACCCCCAACGGCGCGGCGTCGTCATCGGAATTCTTAAGGGCTACATGGGGTTGAGTGGGGCCATTGTTACGCAGCTCTACCATGCGATTTATGGGAAAGATGAAAAGTCGTTGATTTTGTTGTTGGGTTGGTTGCCGGCGGTGATTTCGTTTATTTTCTTGCCGACGGTGCGGCGGATGAAGGTGGAGCACGAGGAGGATGAGCTGAGGGTTTTTTACAGGTTTTTGTATATCTCGTTGGGGCTGGCTGGGTTTTTGATGTTGATGATAATTTTGCAGCAGAAATTTAGTTTTGGGAGAGGGGAGTACGGTGGCAGTGCGGCGGTGGTTACTTTTTTGCTCCTTTTGCCGATTGCGGTTGTTGTTGCTCAGGAATTCAAGGCGTGGCGGCGCTTGAATCAGCCTCCGGTGGTTGAGAATGGGCTTTCCTATACGCCGGGGACGCCGGCGTTGAAGAACACGACACCAATGGCACTCCTCCCGAAGAAACCAAAGGAGACAGAACCAGCAAGCAGCACCAAAATTCAATGGTGGAAAAACGTGTTCAGTCCGCCGGAAAGAGGAGAAGACTGGACAATTCTCCAAGCTCTGTTCAGCGTCGACATGTTCCTCCTCTTTCTCGCCACCGCGTGCGGCGTCGGCGGGACACTAACCGCCATCGACAACCTCGGACAAATCGGACAGTCACAAGATTACCCAAAAAAAAGCATAAGCACATTCGTGTCGCTTGTCAGCATATGGAATTACCTCGGCAGAGTAATGGCCGGATTCCTCTCCGAACATTTGCTAATCAAATACAGATTCCCTCGTCCTTCAATGCTCACAATCGTCCTTCTTCTTTCCTGCATCGCCCATCTTCTAATCGCCTTCAATCCGAGCGGCGGGCTCTACATTGCCTCTGTTTTAACCGGATTCTGCTACGGCGCCCAATGGCCTCTGCTTTTCGCCATCGTCTCAGAGGTTTTTGGGCTAAAATATTACGCGACGCTGTATAATTTCGGGTCAGTGGCGAGCCCCGTGGGGCTTTATTTGCTGAATGTGAATGTGGCGGGGTATTTATACGACAAGGAGGCGAAGAAGCAGCTGGCGGCGACGGGGAGGATAAGGAAAACAGGGGAGGAGTTGATTTGTAATGGGACGGTGTGTTTCAAGCTGTCGTTTGTGATTATTACGGCGGTGAGTTTGTTTGGGGCTTTGGTTTCTTTGGTTTTGGTGATGAGGACGAGGAAGTTTTATAAGAGTGACATTTATCGGAGATTTAGAGAGGCGGAGGAGGCGGAGAAGGCGGAGAAGGCGGAGAAGGAAGACGGCGGTGGGTTCATAAACGGCGGCGATATAGTGGAGGACTCGAAACAGGGGATTAGGCAATGA 1800 50.83 MDPISAGFNTKSFTLKLIKGPWFMMFASFLIMSMAGIPYMFGLYSGTIKSVLGYDQTTLNFISFFKDVGTTVGVLAGLINEVTPPWSILAMGALLNFFGYFMIWLSVSEKIPTHVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGKDEKSLILLLGWLPAVISFIFLPTVRRMKVEHEEDELRVFYRFLYISLGLAGFLMLMIILQQKFSFGRGEYGGSAAVVTFLLLLPIAVVVAQEFKAWRRLNQPPVVENGLSYTPGTPALKNTTPMALLPKKPKETEPASSTKIQWWKNVFSPPERGEDWTILQALFSVDMFLLFLATACGVGGTLTAIDNLGQIGQSQDYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLIKYRFPRPSMLTIVLLLSCIAHLLIAFNPSGGLYIASVLTGFCYGAQWPLLFAIVSEVFGLKYYATLYNFGSVASPVGLYLLNVNVAGYLYDKEAKKQLAATGRIRKTGEELICNGTVCFKLSFVIITAVSLFGALVSLVLVMRTRKFYKSDIYRRFREAEEAEKAEKAEKEDGGGFINGGDIVEDSKQGIRQ 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7489179 7491064 + CmoCh04G014640.1 Cmo04g01464 380439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01464 599 Pfam Nodulin-like 21 265 IPR010658 -
Cmo04g01464 599 MobiDBLite consensus disorder prediction 571 599 - -
Cmo04g01464 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 577 - -
Cmo04g01464 599 SUPERFAMILY MFS general substrate transporter 12 207 IPR036259 -
Cmo04g01464 599 Gene3D MFS general substrate transporter like domains 333 556 IPR036259 -
Cmo04g01464 599 PANTHER MFS TRANSPORTER 9 577 - -
Cmo04g01464 599 SUPERFAMILY MFS general substrate transporter 220 555 IPR036259 -
Cmo04g01464 599 CDD MFS_Mch1p_like 20 541 - -
Cmo04g01464 599 Pfam Major Facilitator Superfamily 354 558 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01464 Cmo-Chr4:7489179 Cmo15g00510 Cmo-Chr15:2350179 0 dispersed
Cmo11g00141 Cmo-Chr11:708639 Cmo04g01464 Cmo-Chr4:7489179 2.19E-83 dispersed
Cmo04g01463 Cmo-Chr4:7484058 Cmo04g01464 Cmo-Chr4:7489179 0 tandem
Cmo04g01464 Cmo-Chr4:7489179 Cmo04g01465 Cmo-Chr4:7492582 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01464 - - csv:101205503 1026.16