Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g01493 ATGGCTTCCTTATTCTCTTCATCCACTCTGTCCCTCATTGCTTTTTGCCTCTCCGGTTTAATCTTCTTCCTCACCAGAAAGCCCAAACCAAACCGTCTCAAACTCCCCCCCGGTCCGCCCGGTTGGCCCCTCGTCGGCAACCTATTCCAAGTCGCCCGGTCCAGAAAACCCTTCTTCGAATACATCGAAGATCAACGCCGAATCTACGGCCCAATTTTTACCCTTAAAATGGGAACGAGAACAATGGTTGTACTGAGCGATTCGAACCTCGTTCACGAGGCTCTAATTAAAAAGGGGGCAGTTTTTGCTGACCGGCCCAGAGAAAATCCTACCCGGACAATATTCAGCAGCAACAAATTTTCCGTCAATGCGGCGGTTTACGGCCCTATATGGCGGTCCCTCCGCCGAAACATGGTGGAGAATATGCTCAGTCCCGGCAAGGTAAAGCAGTTTCGTGGAGTGAGGGAAAAGGCAATGGAAAAATTCATGAAACGGTTACGAGACGAAGCAGAGGCCAATAACGGTGTCGTTTTGGTGTCGAAAAACGCGCGTTTTGCGGTGTTTTGTATTCTGTTAACAATGTGTTTCGGAATCGAAATGGAAGAAGAAGCGGTGGTGAAAATGGACGAGATTCTCAAATCCGTATTGATCACTCTGGAGCCAAGAATCGACGATTATCTCCCGATTCTAACACCGTTTTTTTCGAAAGAAAAAAATCGAGCGAATTTCGTTCGAAAACAGCAAGTTAAATTCGTCGTTGGGTTAATTAATCGGCGGCGGCGAGCGCTGGAAAATCCGGCGTCCGATGGCGCTGCGACGTCGTTTTCATACCTCGACACGCTTTTCGATTTGAAATTCGATTCCAACGGAGGCAGAGCAGCGGCGACGGATGAGGAACTGGTGACACTCTGTTCGGAGTTTTTGAACGGCGGAACCGACACGACGGCGACGGCGATAGAGTGGGGGATGGCGGAATTGATAGAGAATCCGGGAGTTCAGAGGAAGGTTCTAGAAGAAATTAGAGCGACGGTTGGTGAAAAAAAAGTTGAAGAAAATGATTTAGAGAAAATGGTTTATTTACAATCGGTAGTGAAAGAAGTGCTGCGGAAACATCCTCCGACGTTCTTTACTCTGACGCACTCCGTGACGGCGCCGGCGAAACTGGGAGGATACGACATCCCAAAGGACACCAACGTCGAATTCTTCTTACCGGCCATCGGAAAGGATCCGAAGCTGTGGAAGAATCCGGAGAAGTTCGAACCGGAAAGATTTTCCTCCGGCGAGGAAGAAGCCGATATAACCGGCGTCACTGGCGTCAGAATGATGCCGTTCGGCGTCGGGCGGCGGATCTGCCCGGGGTTGGGAATGGGCACCGTCCACATTCACTTAATGCTTGCTAGAATGCTTCAGGAGTTTGAATGGACCGCCTATCCGGCGGCGAACTCCGTCGACTTTTCATGGAAGATGGAGTTCACCGTCGTCATGAAGAATCCTCTTCGGGCTACCATTAAACCAAGGGTTTAA 1524 49.87 MASLFSSSTLSLIAFCLSGLIFFLTRKPKPNRLKLPPGPPGWPLVGNLFQVARSRKPFFEYIEDQRRIYGPIFTLKMGTRTMVVLSDSNLVHEALIKKGAVFADRPRENPTRTIFSSNKFSVNAAVYGPIWRSLRRNMVENMLSPGKVKQFRGVREKAMEKFMKRLRDEAEANNGVVLVSKNARFAVFCILLTMCFGIEMEEEAVVKMDEILKSVLITLEPRIDDYLPILTPFFSKEKNRANFVRKQQVKFVVGLINRRRRALENPASDGAATSFSYLDTLFDLKFDSNGGRAAATDEELVTLCSEFLNGGTDTTATAIEWGMAELIENPGVQRKVLEEIRATVGEKKVEENDLEKMVYLQSVVKEVLRKHPPTFFTLTHSVTAPAKLGGYDIPKDTNVEFFLPAIGKDPKLWKNPEKFEPERFSSGEEEADITGVTGVRMMPFGVGRRICPGLGMGTVHIHLMLARMLQEFEWTAYPAANSVDFSWKMEFTVVMKNPLRATIKPRV 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7650629 7652152 + CmoCh04G014930.1 Cmo04g01493 380468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g01493 507 SUPERFAMILY Cytochrome P450 36 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 506 - -
Cmo04g01493 507 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 Gene3D Cytochrome P450 29 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cmo04g01493 507 PANTHER CYTOCHROME P450 77A4 8 506 - -
Cmo04g01493 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo04g01493 507 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01493 Cmo-Chr4:7650629 Cmo15g00488 Cmo-Chr15:2228428 0 dispersed
Cmo04g01493 Cmo-Chr4:7650629 Cmo04g02650 Cmo-Chr4:19269559 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g01493 K21995 - csv:101217068 822.772